RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 EDN3P14138 238 aa11.14□□□□□ -0.63
TSKU-203ENST00000527881 ZNF10P21506 573 aaPredicted RBP11.14□□□□□ -0.63
TSKU-203ENST00000527881 TUBG1P23258 451 aa11.14□□□□□ -0.63
TSKU-203ENST00000527881 CD81P60033 236 aa11.14□□□□□ -0.63
TSKU-203ENST00000527881 FAM78AQ5JUQ0 283 aa11.14□□□□□ -0.63
TSKU-203ENST00000527881 OR10G6Q8NH81 332 aa11.14□□□□□ -0.63
TSKU-203ENST00000527881 NICN1Q9BSH3 213 aa11.14□□□□□ -0.63
TSKU-203ENST00000527881 BANF2Q9H503 90 aa11.14□□□□□ -0.63
TSKU-203ENST00000527881 IL17BQ9UHF5 180 aa11.14□□□□□ -0.63
TSKU-203ENST00000527881 GPR132Q9UNW8 380 aa11.14□□□□□ -0.63
TSKU-203ENST00000527881 HEATR5AQ86XA9 2040 aa11.14□□□□□ -0.63
TSKU-203ENST00000527881 ATXN7O15265 892 aaPredicted RBP11.13□□□□□ -0.63
TSKU-203ENST00000527881 GLI4P10075 376 aa11.13□□□□□ -0.63
TSKU-203ENST00000527881 FCARP24071 287 aa11.13□□□□□ -0.63
TSKU-203ENST00000527881 SLC10A1Q14973 349 aa11.13□□□□□ -0.63
TSKU-203ENST00000527881 COL13A1Q5TAT6 717 aaPredicted RBP11.13□□□□□ -0.63
TSKU-203ENST00000527881 LANCL3Q6ZV70 420 aa11.13□□□□□ -0.63
TSKU-203ENST00000527881 VN1R4Q7Z5H5 301 aa11.13□□□□□ -0.63
TSKU-203ENST00000527881 C17orf78Q8N4C9 275 aa11.13□□□□□ -0.63
TSKU-203ENST00000527881 HPSE2Q8WWQ2 592 aa11.13□□□□□ -0.63
TSKU-203ENST00000527881 RAB24Q969Q5 203 aa11.13□□□□□ -0.63
TSKU-203ENST00000527881 MVB12AQ96EY5 273 aa11.13□□□□□ -0.63
TSKU-203ENST00000527881 TSPAN32Q96QS1 320 aa11.13□□□□□ -0.63
TSKU-203ENST00000527881 HIST1H2BLQ99880 126 aa11.13□□□□□ -0.63
TSKU-203ENST00000527881 LRIT1Q9P2V4 623 aa11.13□□□□□ -0.63
TSKU-203ENST00000527881 TICRRQ7Z2Z1 1910 aa11.13□□□□□ -0.63
TSKU-203ENST00000527881 A8MWP6 167 aa11.13□□□□□ -0.63
TSKU-203ENST00000527881 ZNF878C9JN71 531 aa11.13□□□□□ -0.63
TSKU-203ENST00000527881 BCAT2O15382 392 aaPredicted RBP11.13□□□□□ -0.63
TSKU-203ENST00000527881 SPINT1O43278 529 aa11.13□□□□□ -0.63
TSKU-203ENST00000527881 GAPDHP04406 335 aaKnown RBP11.13□□□□□ -0.63
TSKU-203ENST00000527881 SLC2A1P11166 492 aa11.13□□□□□ -0.63
TSKU-203ENST00000527881 DMWDQ09019 674 aa11.13□□□□□ -0.63
TSKU-203ENST00000527881 FAM180AQ6UWF9 173 aa11.13□□□□□ -0.63
TSKU-203ENST00000527881 PRSS41Q7RTY9 318 aa11.13□□□□□ -0.63
TSKU-203ENST00000527881 TCEAL8Q8IYN2 117 aa11.13□□□□□ -0.63
TSKU-203ENST00000527881 NPRL2Q8WTW4 380 aa11.13□□□□□ -0.63
TSKU-203ENST00000527881 RSC1A1Q92681 617 aa11.13□□□□□ -0.63
TSKU-203ENST00000527881 SERINC2Q96SA4 455 aa11.13□□□□□ -0.63
TSKU-203ENST00000527881 HCFC1R1Q9NWW0 138 aa11.13□□□□□ -0.63
TSKU-203ENST00000527881 ANAPC1Q9H1A4 1944 aa11.13□□□□□ -0.63
TSKU-203ENST00000527881 PLXNA2O75051 1894 aa11.13□□□□□ -0.63
TSKU-203ENST00000527881 CDRT15L2A8MXV6 281 aa11.13□□□□□ -0.63
TSKU-203ENST00000527881 SYT7O43581 403 aa11.13□□□□□ -0.63
TSKU-203ENST00000527881 NUDT14O95848 222 aa11.13□□□□□ -0.63
TSKU-203ENST00000527881 SOD2P04179 222 aa11.13□□□□□ -0.63
TSKU-203ENST00000527881 ELNP15502 786 aa11.13□□□□□ -0.63
TSKU-203ENST00000527881 TBPP20226 339 aa11.13□□□□□ -0.63
TSKU-203ENST00000527881 MPZP25189 248 aa11.13□□□□□ -0.63
TSKU-203ENST00000527881 PTCRAQ6ISU1 281 aaPredicted RBP11.13□□□□□ -0.63
TSKU-203ENST00000527881 DEFB128Q7Z7B8 93 aa11.13□□□□□ -0.63
TSKU-203ENST00000527881 C1orf87Q8N0U7 546 aa11.13□□□□□ -0.63
TSKU-203ENST00000527881 ZNF664Q8N3J9 261 aa11.13□□□□□ -0.63
TSKU-203ENST00000527881 DTWD2Q8NBA8 298 aa11.13□□□□□ -0.63
TSKU-203ENST00000527881 OR52N4Q8NGI2 321 aa11.13□□□□□ -0.63
TSKU-203ENST00000527881 GPER1Q99527 375 aa11.13□□□□□ -0.63
TSKU-203ENST00000527881 C1orf123Q9NWV4 160 aa11.13□□□□□ -0.63
TSKU-203ENST00000527881 GPR75O95800 540 aa11.12□□□□□ -0.63
TSKU-203ENST00000527881 SUPT4H1P63272 117 aaKnown RBP11.12□□□□□ -0.63
TSKU-203ENST00000527881 ZNF765Q7L2R6 523 aa11.12□□□□□ -0.63
TSKU-203ENST00000527881 MAMDC2Q7Z304 686 aaPredicted RBP11.12□□□□□ -0.63
TSKU-203ENST00000527881 SGPP2Q8IWX5 399 aa11.12□□□□□ -0.63
TSKU-203ENST00000527881 ZFP62Q8NB50 900 aaPredicted RBP11.12□□□□□ -0.63
TSKU-203ENST00000527881 OR4C3Q8NH37 302 aa11.12□□□□□ -0.63
TSKU-203ENST00000527881 SLC25A31Q9H0C2 315 aa11.12□□□□□ -0.63
TSKU-203ENST00000527881 GOLT1BQ9Y3E0 138 aa11.12□□□□□ -0.63
TSKU-203ENST00000527881 LRP12Q9Y561 859 aa11.12□□□□□ -0.63
TSKU-203ENST00000527881 LIPGQ9Y5X9 500 aa11.12□□□□□ -0.63
TSKU-203ENST00000527881 COLEC10Q9Y6Z7 277 aa11.12□□□□□ -0.63
TSKU-203ENST00000527881 TRPM6Q9BX84 2022 aa11.12□□□□□ -0.63
TSKU-203ENST00000527881 TMEM269A0A1B0GVZ9 245 aa11.12□□□□□ -0.63
TSKU-203ENST00000527881 FAM221BA6H8Z2 402 aa11.12□□□□□ -0.63
TSKU-203ENST00000527881 WIPF3A6NGB9 483 aa11.12□□□□□ -0.63
TSKU-203ENST00000527881 IGKV1D-16P01601 117 aa11.12□□□□□ -0.63
TSKU-203ENST00000527881 ALDH3B1P43353 468 aa11.12□□□□□ -0.63
TSKU-203ENST00000527881 GABRA4P48169 554 aa11.12□□□□□ -0.63
TSKU-203ENST00000527881 ZNF74Q16587 644 aa11.12□□□□□ -0.63
TSKU-203ENST00000527881 LFNGQ8NES3 379 aa11.12□□□□□ -0.63
TSKU-203ENST00000527881 SPACA7Q96KW9 195 aa11.12□□□□□ -0.63
TSKU-203ENST00000527881 NOL4LQ96MY1 436 aaPredicted RBP11.12□□□□□ -0.63
TSKU-203ENST00000527881 CBLN4Q9NTU7 201 aa11.12□□□□□ -0.63
TSKU-203ENST00000527881 ZNF701Q9NV72 531 aaPredicted RBP11.12□□□□□ -0.63
TSKU-203ENST00000527881 VSX1Q9NZR4 365 aaPredicted RBP11.12□□□□□ -0.63
TSKU-203ENST00000527881 KNL1Q8NG31 2342 aa11.12□□□□□ -0.63
TSKU-203ENST00000527881 LAMA3Q16787 3333 aa11.12□□□□□ -0.63
TSKU-203ENST00000527881 RBFOX3A6NFN3 312 aa11.12□□□□□ -0.63
TSKU-203ENST00000527881 RAB4AP20338 218 aa11.12□□□□□ -0.63
TSKU-203ENST00000527881 DPTQ07507 201 aa11.12□□□□□ -0.63
TSKU-203ENST00000527881 ISXQ2M1V0 245 aa11.12□□□□□ -0.63
TSKU-203ENST00000527881 DMRTC1Q5HYR2 192 aa11.12□□□□□ -0.63
TSKU-203ENST00000527881 RD3Q7Z3Z2 195 aa11.12□□□□□ -0.63
TSKU-203ENST00000527881 LINC00346Q8IVM7 164 aa11.12□□□□□ -0.63
TSKU-203ENST00000527881 TMEM52Q8NDY8 209 aa11.12□□□□□ -0.63
TSKU-203ENST00000527881 DTD1Q8TEA8 209 aa11.12□□□□□ -0.63
TSKU-203ENST00000527881 ABHD6Q9BV23 337 aa11.12□□□□□ -0.63
TSKU-203ENST00000527881 GPR87Q9BY21 358 aa11.12□□□□□ -0.63
TSKU-203ENST00000527881 ZNF724A8MTY0 619 aa11.11□□□□□ -0.63
TSKU-203ENST00000527881 SEC11BP0C7V7 166 aa11.11□□□□□ -0.63
TSKU-203ENST00000527881 VSIG8P0DPA2 414 aa11.11□□□□□ -0.63
TSKU-203ENST00000527881 MYOGP15173 224 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms