RNA–Protein interactions for RNA: ENST00000527805.5

ATM-212, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 4,841 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-212ENST00000527805 CACNA1BQ00975 2339 aa13.13□□□□□ -0.31
ATM-212ENST00000527805 MEIOCA2RUB1 952 aa13.13□□□□□ -0.31
ATM-212ENST00000527805 SPRY3O43610 288 aa13.13□□□□□ -0.31
ATM-212ENST00000527805 SC5DO75845 299 aa13.13□□□□□ -0.31
ATM-212ENST00000527805 ERVK-16P61578 105 aa13.13□□□□□ -0.31
ATM-212ENST00000527805 KRTCAP3Q53RY4 240 aa13.13□□□□□ -0.31
ATM-212ENST00000527805 GPR155Q7Z3F1 870 aa13.13□□□□□ -0.31
ATM-212ENST00000527805 OR8H3Q8N146 312 aa13.13□□□□□ -0.31
ATM-212ENST00000527805 SLC26A10Q8NG04 563 aa13.13□□□□□ -0.31
ATM-212ENST00000527805 OR52I2Q8NH67 350 aa13.13□□□□□ -0.31
ATM-212ENST00000527805 TIMD4Q96H15 378 aa13.13□□□□□ -0.31
ATM-212ENST00000527805 SNX18Q96RF0 628 aa13.13□□□□□ -0.31
ATM-212ENST00000527805 TMEM82A0PJX8 343 aa13.13□□□□□ -0.31
ATM-212ENST00000527805 H7C1Q1 480 aa13.13□□□□□ -0.31
ATM-212ENST00000527805 SLC17A2O00624 439 aa13.13□□□□□ -0.31
ATM-212ENST00000527805 SPRY1O43609 319 aaPredicted RBP13.13□□□□□ -0.31
ATM-212ENST00000527805 CRYBB2P43320 205 aa13.13□□□□□ -0.31
ATM-212ENST00000527805 LINC00299Q6ZSB3 139 aa13.13□□□□□ -0.31
ATM-212ENST00000527805 CITED4Q96RK1 184 aa13.13□□□□□ -0.31
ATM-212ENST00000527805 RANBP3Q9H6Z4 567 aaPredicted RBP13.13□□□□□ -0.31
ATM-212ENST00000527805 FOXJ3Q9UPW0 622 aa13.13□□□□□ -0.31
ATM-212ENST00000527805 ZSCAN5BA6NJL1 495 aa13.13□□□□□ -0.31
ATM-212ENST00000527805 SIRPB1O00241 398 aa13.13□□□□□ -0.31
ATM-212ENST00000527805 HLA-AP01891 365 aaKnown RBP13.13□□□□□ -0.31
ATM-212ENST00000527805 PMP2P02689 132 aa13.13□□□□□ -0.31
ATM-212ENST00000527805 MGMTP16455 207 aa13.13□□□□□ -0.31
ATM-212ENST00000527805 PCMT1P22061 227 aa13.13□□□□□ -0.31
ATM-212ENST00000527805 PTGER4P35408 488 aa13.13□□□□□ -0.31
ATM-212ENST00000527805 HIKESHIQ53FT3 197 aa13.13□□□□□ -0.31
ATM-212ENST00000527805 WDSUB1Q8N9V3 476 aa13.13□□□□□ -0.31
ATM-212ENST00000527805 VOPP1Q96AW1 172 aa13.13□□□□□ -0.31
ATM-212ENST00000527805 TMEM38BQ9NVV0 291 aa13.13□□□□□ -0.31
ATM-212ENST00000527805 IGKV1D-42A0A075B6H8 117 aa13.12□□□□□ -0.31
ATM-212ENST00000527805 SH2D1BO14796 132 aa13.12□□□□□ -0.31
ATM-212ENST00000527805 IGHA1P01876 353 aa13.12□□□□□ -0.31
ATM-212ENST00000527805 MRPS34P82930 218 aaKnown RBP13.12□□□□□ -0.31
ATM-212ENST00000527805 ZNF239Q16600 458 aaKnown RBP13.12□□□□□ -0.31
ATM-212ENST00000527805 TATDN3Q17R31 274 aa13.12□□□□□ -0.31
ATM-212ENST00000527805 BHLHA15Q7RTS1 189 aaPredicted RBP13.12□□□□□ -0.31
ATM-212ENST00000527805 ZBTB8BQ8NAP8 495 aaPredicted RBP13.12□□□□□ -0.31
ATM-212ENST00000527805 OR56B4Q8NH76 319 aa13.12□□□□□ -0.31
ATM-212ENST00000527805 ST3GAL6Q9Y274 331 aa13.12□□□□□ -0.31
ATM-212ENST00000527805 FLVCR1Q9Y5Y0 555 aa13.12□□□□□ -0.31
ATM-212ENST00000527805 MED12Q93074 2177 aa13.12□□□□□ -0.31
ATM-212ENST00000527805 LOC102723996A0A087X1L8 192 aa13.12□□□□□ -0.31
ATM-212ENST00000527805 F5H0A9 414 aaPredicted RBP13.12□□□□□ -0.31
ATM-212ENST00000527805 GABARAPH6UMI1 98 aa13.12□□□□□ -0.31
ATM-212ENST00000527805 CST2P09228 141 aa13.12□□□□□ -0.31
ATM-212ENST00000527805 RFPL3SP0C7P2 107 aa13.12□□□□□ -0.31
ATM-212ENST00000527805 EVX1P49640 407 aa13.12□□□□□ -0.31
ATM-212ENST00000527805 PLGLAQ15195 96 aa13.12□□□□□ -0.31
ATM-212ENST00000527805 C1orf87Q8N0U7 546 aa13.12□□□□□ -0.31
ATM-212ENST00000527805 SHISA5Q8N114 240 aa13.12□□□□□ -0.31
ATM-212ENST00000527805 C12orf45Q8N5I9 185 aaPredicted RBP13.12□□□□□ -0.31
ATM-212ENST00000527805 HAS2Q92819 552 aa13.12□□□□□ -0.31
ATM-212ENST00000527805 SPSB1Q96BD6 273 aa13.12□□□□□ -0.31
ATM-212ENST00000527805 SPIN2AQ99865 258 aa13.12□□□□□ -0.31
ATM-212ENST00000527805 SPIN2BQ9BPZ2 258 aa13.12□□□□□ -0.31
ATM-212ENST00000527805 C11orf54Q9H0W9 315 aaPredicted RBP13.12□□□□□ -0.31
ATM-212ENST00000527805 KCNJ16Q9NPI9 418 aa13.12□□□□□ -0.31
ATM-212ENST00000527805 CA6P23280 308 aa13.12□□□□□ -0.31
ATM-212ENST00000527805 MECP2P51608 486 aaKnown RBP13.12□□□□□ -0.31
ATM-212ENST00000527805 SNRPNP63162 240 aaKnown RBP13.12□□□□□ -0.31
ATM-212ENST00000527805 FAM221AA4D161 298 aa13.11□□□□□ -0.31
ATM-212ENST00000527805 NME2P1O60361 137 aa13.11□□□□□ -0.31
ATM-212ENST00000527805 WDR1O75083 606 aa13.11□□□□□ -0.31
ATM-212ENST00000527805 ACSM4P0C7M7 580 aa13.11□□□□□ -0.31
ATM-212ENST00000527805 NME2P22392 152 aa13.11□□□□□ -0.31
ATM-212ENST00000527805 FGL1Q08830 312 aa13.11□□□□□ -0.31
ATM-212ENST00000527805 SLC9A3R2Q15599 337 aa13.11□□□□□ -0.31
ATM-212ENST00000527805 OR2Z1Q8NG97 314 aa13.11□□□□□ -0.31
ATM-212ENST00000527805 H3BMH7 237 aa13.11□□□□□ -0.31
ATM-212ENST00000527805 CCL21O00585 134 aa13.11□□□□□ -0.31
ATM-212ENST00000527805 SPINT2O43291 252 aa13.11□□□□□ -0.31
ATM-212ENST00000527805 EIF4EP06730 217 aaKnown RBP13.11□□□□□ -0.31
ATM-212ENST00000527805 LPLP06858 475 aa13.11□□□□□ -0.31
ATM-212ENST00000527805 KIR2DL3P43628 341 aa13.11□□□□□ -0.31
ATM-212ENST00000527805 SRP9P49458 86 aaKnown RBP13.11□□□□□ -0.31
ATM-212ENST00000527805 GNG3P63215 75 aa13.11□□□□□ -0.31
ATM-212ENST00000527805 DGCR2P98153 550 aa13.11□□□□□ -0.31
ATM-212ENST00000527805 CYCSP99999 105 aaKnown RBP13.11□□□□□ -0.31
ATM-212ENST00000527805 OR8B12Q8NGG6 310 aa13.11□□□□□ -0.31
ATM-212ENST00000527805 SLC7A10Q9NS82 523 aa13.11□□□□□ -0.31
ATM-212ENST00000527805 ZNF275Q9NSD4 429 aaPredicted RBP13.11□□□□□ -0.31
ATM-212ENST00000527805 IFNA7P01567 189 aa13.11□□□□□ -0.31
ATM-212ENST00000527805 CEBPGP53567 150 aa13.11□□□□□ -0.31
ATM-212ENST00000527805 FAM214BQ7L5A3 538 aa13.11□□□□□ -0.31
ATM-212ENST00000527805 CXorf67Q86X51 503 aaPredicted RBP13.11□□□□□ -0.31
ATM-212ENST00000527805 NUDCD2Q8WVJ2 157 aa13.11□□□□□ -0.31
ATM-212ENST00000527805 ZCCHC14Q8WYQ9 949 aaKnown RBP13.11□□□□□ -0.31
ATM-212ENST00000527805 ADAT1Q9BUB4 502 aaKnown RBP13.11□□□□□ -0.31
ATM-212ENST00000527805 ARL6Q9H0F7 186 aa13.11□□□□□ -0.31
ATM-212ENST00000527805 ZNF224Q9NZL3 707 aa13.11□□□□□ -0.31
ATM-212ENST00000527805 ARID1AO14497 2285 aa13.11□□□□□ -0.31
ATM-212ENST00000527805 HMX3A6NHT5 357 aa13.11□□□□□ -0.31
ATM-212ENST00000527805 M0R233 179 aa13.11□□□□□ -0.31
ATM-212ENST00000527805 HOXB5P09067 269 aa13.11□□□□□ -0.31
ATM-212ENST00000527805 NFYBP25208 207 aa13.11□□□□□ -0.31
ATM-212ENST00000527805 PPP1CBP62140 327 aa13.11□□□□□ -0.31
ATM-212ENST00000527805 DMKNQ6E0U4 476 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms