RNA–Protein interactions for RNA: ENST00000527497.1

NXF1-205, Transcript of nuclear RNA export factor 1, human

TSL 2

Gene NXF1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NXF1-205	ENST00000527497	ZNF266	Q14584	549 aa		4.55	□□□□□ -1.68
NXF1-205	ENST00000527497	METTL13	Q8N6R0	699 aa		4.55	□□□□□ -1.68
NXF1-205	ENST00000527497	OR51Q1	Q8NH59	317 aa		4.55	□□□□□ -1.68
NXF1-205	ENST00000527497	OPTN	Q96CV9	577 aa		4.55	□□□□□ -1.68
NXF1-205	ENST00000527497	SEH1L	Q96EE3	360 aa		4.55	□□□□□ -1.68
NXF1-205	ENST00000527497	LRRC61	Q9BV99	259 aa		4.55	□□□□□ -1.68
NXF1-205	ENST00000527497	ZNF696	Q9H7X3	374 aa		4.55	□□□□□ -1.68
NXF1-205	ENST00000527497	PANK3	Q9H999	370 aa		4.55	□□□□□ -1.68
NXF1-205	ENST00000527497	SCRT2	Q9NQ03	307 aa		4.55	□□□□□ -1.68
NXF1-205	ENST00000527497	SPANXB1	Q9NS25	103 aa	Predicted RBP	4.55	□□□□□ -1.68
NXF1-205	ENST00000527497	RGS18	Q9NS28	235 aa		4.55	□□□□□ -1.68
NXF1-205	ENST00000527497	C3orf18	Q9UK00	162 aa		4.55	□□□□□ -1.68
NXF1-205	ENST00000527497	UBIAD1	Q9Y5Z9	338 aa		4.55	□□□□□ -1.68
NXF1-205	ENST00000527497	WDR81	Q562E7	1941 aa		4.54	□□□□□ -1.68
NXF1-205	ENST00000527497	SHISA9	B4DS77	424 aa		4.54	□□□□□ -1.68
NXF1-205	ENST00000527497	LRRN3	E7EW58	273 aa		4.54	□□□□□ -1.68
NXF1-205	ENST00000527497	PHF1	O43189	567 aa	Predicted RBP	4.54	□□□□□ -1.68
NXF1-205	ENST00000527497	RDH16	O75452	317 aa		4.54	□□□□□ -1.68
NXF1-205	ENST00000527497	SEMA3D	O95025	777 aa		4.54	□□□□□ -1.68
NXF1-205	ENST00000527497	RAB3D	O95716	219 aa		4.54	□□□□□ -1.68
NXF1-205	ENST00000527497	APOE	P02649	317 aa		4.54	□□□□□ -1.68
NXF1-205	ENST00000527497	RCC1	P18754	421 aa	Predicted RBP	4.54	□□□□□ -1.68
NXF1-205	ENST00000527497	PVALB	P20472	110 aa	Predicted RBP	4.54	□□□□□ -1.68
NXF1-205	ENST00000527497	COX7A1	P24310	79 aa		4.54	□□□□□ -1.68
NXF1-205	ENST00000527497	HSPA13	P48723	471 aa		4.54	□□□□□ -1.68
NXF1-205	ENST00000527497	RAB38	P57729	211 aa		4.54	□□□□□ -1.68
NXF1-205	ENST00000527497	AP3S2	P59780	193 aa		4.54	□□□□□ -1.68
NXF1-205	ENST00000527497	TCP10	Q12799	353 aa		4.54	□□□□□ -1.68
NXF1-205	ENST00000527497	PDZD11	Q5EBL8	140 aa		4.54	□□□□□ -1.68
NXF1-205	ENST00000527497	SYT6	Q5T7P8	510 aa	Predicted RBP	4.54	□□□□□ -1.68
NXF1-205	ENST00000527497	FAM45BP	Q6NSW5	357 aa		4.54	□□□□□ -1.68
NXF1-205	ENST00000527497	H2AFV	Q71UI9	128 aa		4.54	□□□□□ -1.68
NXF1-205	ENST00000527497	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	4.54	□□□□□ -1.68
NXF1-205	ENST00000527497	ENTHD1	Q8IYW4	607 aa		4.54	□□□□□ -1.68
NXF1-205	ENST00000527497		Q8N402	240 aa		4.54	□□□□□ -1.68
NXF1-205	ENST00000527497	SYNPR	Q8TBG9	265 aa		4.54	□□□□□ -1.68
NXF1-205	ENST00000527497	GALNT14	Q96FL9	552 aa		4.54	□□□□□ -1.68
NXF1-205	ENST00000527497	OPRPN	Q99935	248 aa	Predicted RBP	4.54	□□□□□ -1.68
NXF1-205	ENST00000527497	SULT4A1	Q9BR01	284 aa		4.54	□□□□□ -1.68
NXF1-205	ENST00000527497	PTGES2	Q9H7Z7	377 aa		4.54	□□□□□ -1.68
NXF1-205	ENST00000527497	TRIM45	Q9H8W5	580 aa	Predicted RBP	4.54	□□□□□ -1.68
NXF1-205	ENST00000527497	BABAM2	Q9NXR7	383 aa		4.54	□□□□□ -1.68
NXF1-205	ENST00000527497	SIGLEC9	Q9Y336	463 aa		4.54	□□□□□ -1.68
NXF1-205	ENST00000527497	MTCH2	Q9Y6C9	303 aa		4.54	□□□□□ -1.68
NXF1-205	ENST00000527497	CEMIP	Q8WUJ3	1361 aa		4.53	□□□□□ -1.68
NXF1-205	ENST00000527497	RAB3GAP2	Q9H2M9	1393 aa		4.53	□□□□□ -1.68
NXF1-205	ENST00000527497	IGHV3OR16-9	A0A0B4J2B5	98 aa		4.53	□□□□□ -1.68
NXF1-205	ENST00000527497	OR5K4	A6NMS3	321 aa		4.53	□□□□□ -1.68
NXF1-205	ENST00000527497	GJE1	A6NN92	205 aa		4.53	□□□□□ -1.68
NXF1-205	ENST00000527497	LINC01619	G3V211	115 aa		4.53	□□□□□ -1.68
NXF1-205	ENST00000527497		H3BQV1	296 aa		4.53	□□□□□ -1.68
NXF1-205	ENST00000527497		H7C417	338 aa		4.53	□□□□□ -1.68
NXF1-205	ENST00000527497	UBD	O15205	165 aa		4.53	□□□□□ -1.68
NXF1-205	ENST00000527497	GALR3	O60755	368 aa	Predicted RBP	4.53	□□□□□ -1.68
NXF1-205	ENST00000527497	CTXN2	P0C2S0	81 aa		4.53	□□□□□ -1.68
NXF1-205	ENST00000527497	IGHV3-43D	P0DP04	118 aa		4.53	□□□□□ -1.68
NXF1-205	ENST00000527497	HTR1D	P28221	377 aa		4.53	□□□□□ -1.68
NXF1-205	ENST00000527497	RPS9	P46781	194 aa	Known RBP	4.53	□□□□□ -1.68
NXF1-205	ENST00000527497	NKX2-5	P52952	324 aa	Predicted RBP	4.53	□□□□□ -1.68
NXF1-205	ENST00000527497	RAB14	P61106	215 aa		4.53	□□□□□ -1.68
NXF1-205	ENST00000527497	MRPS25	P82663	173 aa	Known RBP	4.53	□□□□□ -1.68
NXF1-205	ENST00000527497	REEP5	Q00765	189 aa		4.53	□□□□□ -1.68
NXF1-205	ENST00000527497	GLO1	Q04760	184 aa		4.53	□□□□□ -1.68
NXF1-205	ENST00000527497	COA6	Q5JTJ3	125 aa	Known RBP	4.53	□□□□□ -1.68
NXF1-205	ENST00000527497	MED27	Q6P2C8	311 aa		4.53	□□□□□ -1.68
NXF1-205	ENST00000527497	ZNF613	Q6PF04	617 aa		4.53	□□□□□ -1.68
NXF1-205	ENST00000527497		Q6ZVH6	145 aa		4.53	□□□□□ -1.68
NXF1-205	ENST00000527497	USP50	Q70EL3	339 aa	Predicted RBP	4.53	□□□□□ -1.68
NXF1-205	ENST00000527497	KLHDC8B	Q8IXV7	354 aa		4.53	□□□□□ -1.68
NXF1-205	ENST00000527497	ZNF786	Q8N393	782 aa		4.53	□□□□□ -1.68
NXF1-205	ENST00000527497	OR10G9	Q8NGN4	311 aa		4.53	□□□□□ -1.68
NXF1-205	ENST00000527497	OR2AE1	Q8NHA4	323 aa		4.53	□□□□□ -1.68
NXF1-205	ENST00000527497	NT5C	Q8TCD5	201 aa		4.53	□□□□□ -1.68
NXF1-205	ENST00000527497	FAM45A	Q8TCE6	357 aa		4.53	□□□□□ -1.68
NXF1-205	ENST00000527497	LRRC29	Q8WV35	223 aa		4.53	□□□□□ -1.68
NXF1-205	ENST00000527497	RGP1	Q92546	391 aa	Predicted RBP	4.53	□□□□□ -1.68
NXF1-205	ENST00000527497	IL22RA2	Q969J5	263 aa		4.53	□□□□□ -1.68
NXF1-205	ENST00000527497	ZMYND19	Q96E35	227 aa	Predicted RBP	4.53	□□□□□ -1.68
NXF1-205	ENST00000527497	MBOAT7	Q96N66	472 aa		4.53	□□□□□ -1.68
NXF1-205	ENST00000527497	RDH12	Q96NR8	316 aa		4.53	□□□□□ -1.68
NXF1-205	ENST00000527497	DUX3	Q96PT4	197 aa		4.53	□□□□□ -1.68
NXF1-205	ENST00000527497	TEAD3	Q99594	435 aa		4.53	□□□□□ -1.68
NXF1-205	ENST00000527497	HRASLS	Q9HDD0	168 aa		4.53	□□□□□ -1.68
NXF1-205	ENST00000527497	ABCB9	Q9NP78	766 aa		4.53	□□□□□ -1.68
NXF1-205	ENST00000527497	FGFR1OP2	Q9NVK5	253 aa		4.53	□□□□□ -1.68
NXF1-205	ENST00000527497	MARCH5	Q9NX47	278 aa		4.53	□□□□□ -1.68
NXF1-205	ENST00000527497	MTFP1	Q9UDX5	166 aa		4.53	□□□□□ -1.68
NXF1-205	ENST00000527497	CLEC4E	Q9ULY5	219 aa		4.53	□□□□□ -1.68
NXF1-205	ENST00000527497	SAMHD1	Q9Y3Z3	626 aa	Known RBP	4.53	□□□□□ -1.68
NXF1-205	ENST00000527497	LRRC42	Q9Y546	428 aa		4.53	□□□□□ -1.68
NXF1-205	ENST00000527497	MRPS18B	Q9Y676	258 aa	Known RBP	4.53	□□□□□ -1.68
NXF1-205	ENST00000527497	TRAV8-4	A0A0B4J246	113 aa		4.52	□□□□□ -1.69
NXF1-205	ENST00000527497		H0Y980	276 aa		4.52	□□□□□ -1.69
NXF1-205	ENST00000527497		M0QZ92	97 aa		4.52	□□□□□ -1.69
NXF1-205	ENST00000527497		M0R036	132 aa		4.52	□□□□□ -1.69
NXF1-205	ENST00000527497	XKRY	O14609	159 aa		4.52	□□□□□ -1.69
NXF1-205	ENST00000527497	SYNGR1	O43759	233 aa		4.52	□□□□□ -1.69
NXF1-205	ENST00000527497	IFNA5	P01569	189 aa		4.52	□□□□□ -1.69
NXF1-205	ENST00000527497		P01737	135 aa		4.52	□□□□□ -1.69
NXF1-205	ENST00000527497	ICAM2	P13598	275 aa		4.52	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms