RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 AMDHD2Q9Y303 409 aa17.78■□□□□ 0.44
SMCO4-203ENST00000526869 TPPPO94811 219 aa17.77■□□□□ 0.44
SMCO4-203ENST00000526869 PRF1P14222 555 aa17.77■□□□□ 0.44
SMCO4-203ENST00000526869 HTR2CP28335 458 aa17.77■□□□□ 0.44
SMCO4-203ENST00000526869 RIPPLY1Q0D2K3 151 aa17.77■□□□□ 0.44
SMCO4-203ENST00000526869 MALLQ13021 153 aa17.77■□□□□ 0.44
SMCO4-203ENST00000526869 TBC1D28Q2M2D7 210 aa17.77■□□□□ 0.44
SMCO4-203ENST00000526869 C3P1Q6ZMU1 363 aa17.77■□□□□ 0.44
SMCO4-203ENST00000526869 WDR31Q8NA23 367 aa17.77■□□□□ 0.44
SMCO4-203ENST00000526869 OR4M1Q8NGD0 313 aa17.77■□□□□ 0.44
SMCO4-203ENST00000526869 OR2AE1Q8NHA4 323 aa17.77■□□□□ 0.44
SMCO4-203ENST00000526869 TBCCD1Q9NVR7 557 aa17.77■□□□□ 0.44
SMCO4-203ENST00000526869 ZNF629Q9UEG4 869 aaPredicted RBP17.77■□□□□ 0.44
SMCO4-203ENST00000526869 PIGLQ9Y2B2 252 aa17.77■□□□□ 0.44
SMCO4-203ENST00000526869 RHBDD3Q9Y3P4 386 aa17.77■□□□□ 0.44
SMCO4-203ENST00000526869 MAP1BP46821 2468 aaKnown RBP17.77■□□□□ 0.43
SMCO4-203ENST00000526869 INTS1Q8N201 2190 aaKnown RBP17.76■□□□□ 0.43
SMCO4-203ENST00000526869 LOC100289279A0A1B0GTE1 492 aa17.76■□□□□ 0.43
SMCO4-203ENST00000526869 FAHP16930 419 aa17.76■□□□□ 0.43
SMCO4-203ENST00000526869 PSMB1P20618 241 aaKnown RBP17.76■□□□□ 0.43
SMCO4-203ENST00000526869 GSK3AP49840 483 aa17.76■□□□□ 0.43
SMCO4-203ENST00000526869 CLDN12P56749 244 aa17.76■□□□□ 0.43
SMCO4-203ENST00000526869 FAM3AP98173 230 aa17.76■□□□□ 0.43
SMCO4-203ENST00000526869 MRPL49Q13405 166 aaKnown RBP17.76■□□□□ 0.43
SMCO4-203ENST00000526869 JAGN1Q8N5M9 183 aa17.76■□□□□ 0.43
SMCO4-203ENST00000526869 SSC4DQ8WTU2 575 aa17.76■□□□□ 0.43
SMCO4-203ENST00000526869 FAM3DQ96BQ1 224 aa17.76■□□□□ 0.43
SMCO4-203ENST00000526869 SLC25A38Q96DW6 304 aa17.76■□□□□ 0.43
SMCO4-203ENST00000526869 NEK6Q9HC98 313 aa17.76■□□□□ 0.43
SMCO4-203ENST00000526869 DSPP15924 2871 aaKnown RBP17.75■□□□□ 0.43
SMCO4-203ENST00000526869 OR5H1A6NKK0 313 aa17.75■□□□□ 0.43
SMCO4-203ENST00000526869 MAGEB3O15480 346 aa17.75■□□□□ 0.43
SMCO4-203ENST00000526869 IGKV3-15P01624 115 aa17.75■□□□□ 0.43
SMCO4-203ENST00000526869 ACKR3P25106 362 aa17.75■□□□□ 0.43
SMCO4-203ENST00000526869 ART1P52961 327 aa17.75■□□□□ 0.43
SMCO4-203ENST00000526869 IFITM3Q01628 133 aa17.75■□□□□ 0.43
SMCO4-203ENST00000526869 ZNF92Q03936 586 aa17.75■□□□□ 0.43
SMCO4-203ENST00000526869 PMPCAQ10713 525 aa17.75■□□□□ 0.43
SMCO4-203ENST00000526869 IL18Q14116 193 aa17.75■□□□□ 0.43
SMCO4-203ENST00000526869 P2RY14Q15391 338 aa17.75■□□□□ 0.43
SMCO4-203ENST00000526869 TMEM42Q69YG0 159 aa17.75■□□□□ 0.43
SMCO4-203ENST00000526869 TMEM211Q6ICI0 200 aa17.75■□□□□ 0.43
SMCO4-203ENST00000526869 ZNF474Q6S9Z5 364 aaPredicted RBP17.75■□□□□ 0.43
SMCO4-203ENST00000526869 KRT74Q7RTS7 529 aa17.75■□□□□ 0.43
SMCO4-203ENST00000526869 MRGPRGQ86SM5 289 aa17.75■□□□□ 0.43
SMCO4-203ENST00000526869 ST6GALNAC3Q8NDV1 305 aa17.75■□□□□ 0.43
SMCO4-203ENST00000526869 OR52N4Q8NGI2 321 aa17.75■□□□□ 0.43
SMCO4-203ENST00000526869 OR5L1Q8NGL2 311 aa17.75■□□□□ 0.43
SMCO4-203ENST00000526869 PTX4Q96A99 478 aa17.75■□□□□ 0.43
SMCO4-203ENST00000526869 MS4A3Q96HJ5 214 aa17.75■□□□□ 0.43
SMCO4-203ENST00000526869 TECTBQ96PL2 329 aa17.75■□□□□ 0.43
SMCO4-203ENST00000526869 REPIN1Q9BWE0 567 aaKnown RBP17.75■□□□□ 0.43
SMCO4-203ENST00000526869 CGGBP1Q9UFW8 167 aaPredicted RBP17.75■□□□□ 0.43
SMCO4-203ENST00000526869 TINAGQ9UJW2 476 aa17.75■□□□□ 0.43
SMCO4-203ENST00000526869 A0A0G2JNJ9 132 aa17.74■□□□□ 0.43
SMCO4-203ENST00000526869 A6NIN4 97 aa17.74■□□□□ 0.43
SMCO4-203ENST00000526869 ERVH48-1M5A8F1 160 aa17.74■□□□□ 0.43
SMCO4-203ENST00000526869 CCNOP22674 350 aa17.74■□□□□ 0.43
SMCO4-203ENST00000526869 IL32P24001 234 aa17.74■□□□□ 0.43
SMCO4-203ENST00000526869 MNDAP41218 407 aa17.74■□□□□ 0.43
SMCO4-203ENST00000526869 PITPNBP48739 271 aa17.74■□□□□ 0.43
SMCO4-203ENST00000526869 POU3F4P49335 361 aa17.74■□□□□ 0.43
SMCO4-203ENST00000526869 TNK1Q13470 666 aa17.74■□□□□ 0.43
SMCO4-203ENST00000526869 PYDC2Q56P42 97 aa17.74■□□□□ 0.43
SMCO4-203ENST00000526869 CLVS2Q5SYC1 327 aa17.74■□□□□ 0.43
SMCO4-203ENST00000526869 PYHIN1Q6K0P9 492 aa17.74■□□□□ 0.43
SMCO4-203ENST00000526869 LYSMD2Q8IV50 215 aa17.74■□□□□ 0.43
SMCO4-203ENST00000526869 CMTM4Q8IZR5 234 aa17.74■□□□□ 0.43
SMCO4-203ENST00000526869 SPSB1Q96BD6 273 aa17.74■□□□□ 0.43
SMCO4-203ENST00000526869 HAVCR1Q96D42 359 aa17.74■□□□□ 0.43
SMCO4-203ENST00000526869 USB1Q9BQ65 265 aaKnown RBP17.74■□□□□ 0.43
SMCO4-203ENST00000526869 VKORC1Q9BQB6 163 aa17.74■□□□□ 0.43
SMCO4-203ENST00000526869 CDH20Q9HBT6 801 aa17.74■□□□□ 0.43
SMCO4-203ENST00000526869 ABCB10Q9NRK6 738 aa17.74■□□□□ 0.43
SMCO4-203ENST00000526869 RHBDL2Q9NX52 303 aa17.74■□□□□ 0.43
SMCO4-203ENST00000526869 FBLN5Q9UBX5 448 aa17.74■□□□□ 0.43
SMCO4-203ENST00000526869 Q9UFV3 132 aa17.74■□□□□ 0.43
SMCO4-203ENST00000526869 IGKV1-9A0A0C4DH69 117 aa17.73■□□□□ 0.43
SMCO4-203ENST00000526869 A8MXE2 369 aa17.73■□□□□ 0.43
SMCO4-203ENST00000526869 BPNT1O95861 308 aa17.73■□□□□ 0.43
SMCO4-203ENST00000526869 IGLV1-44P01699 117 aa17.73■□□□□ 0.43
SMCO4-203ENST00000526869 CCL2P13500 99 aa17.73■□□□□ 0.43
SMCO4-203ENST00000526869 ZNF93P35789 620 aaPredicted RBP17.73■□□□□ 0.43
SMCO4-203ENST00000526869 WNT5AP41221 380 aa17.73■□□□□ 0.43
SMCO4-203ENST00000526869 IDH3GP51553 393 aaPredicted RBP17.73■□□□□ 0.43
SMCO4-203ENST00000526869 CASP6P55212 293 aa17.73■□□□□ 0.43
SMCO4-203ENST00000526869 PITPNAQ00169 270 aa17.73■□□□□ 0.43
SMCO4-203ENST00000526869 CNN3Q15417 329 aaKnown RBP17.73■□□□□ 0.43
SMCO4-203ENST00000526869 TSC22D1Q15714 1073 aa17.73■□□□□ 0.43
SMCO4-203ENST00000526869 RGS21Q2M5E4 152 aa17.73■□□□□ 0.43
SMCO4-203ENST00000526869 C2orf76Q3KRA6 126 aa17.73■□□□□ 0.43
SMCO4-203ENST00000526869 C3orf36Q3SXR2 165 aa17.73■□□□□ 0.43
SMCO4-203ENST00000526869 TIMM23BQ5SRD1 257 aa17.73■□□□□ 0.43
SMCO4-203ENST00000526869 MRPL21Q7Z2W9 205 aaKnown RBP17.73■□□□□ 0.43
SMCO4-203ENST00000526869 OR51D1Q8NGF3 324 aa17.73■□□□□ 0.43
SMCO4-203ENST00000526869 SYNPRQ8TBG9 265 aa17.73■□□□□ 0.43
SMCO4-203ENST00000526869 CPNE2Q96FN4 548 aaPredicted RBP17.73■□□□□ 0.43
SMCO4-203ENST00000526869 S100A16Q96FQ6 103 aaKnown RBP17.73■□□□□ 0.43
SMCO4-203ENST00000526869 DMRTA2Q96SC8 542 aa17.73■□□□□ 0.43
SMCO4-203ENST00000526869 CNTD2Q9H8S5 307 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms