RNA–Protein interactions for RNA: ENST00000526054.5

VPS28-204, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 892 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-204ENST00000526054 ACOD1A6NK06 481 aa8.6□□□□□ -1.03
VPS28-204ENST00000526054 IQCF6A8MYZ5 107 aa8.6□□□□□ -1.03
VPS28-204ENST00000526054 PRR32B1ATL7 298 aa8.6□□□□□ -1.03
VPS28-204ENST00000526054 B4DSR2 109 aa8.6□□□□□ -1.03
VPS28-204ENST00000526054 TPD52L2O43399 206 aaKnown RBP8.6□□□□□ -1.03
VPS28-204ENST00000526054 WBP4O75554 376 aaKnown RBP8.6□□□□□ -1.03
VPS28-204ENST00000526054 SULT1C4O75897 302 aa8.6□□□□□ -1.03
VPS28-204ENST00000526054 ACHEP22303 614 aa8.6□□□□□ -1.03
VPS28-204ENST00000526054 TNFSF4P23510 183 aa8.6□□□□□ -1.03
VPS28-204ENST00000526054 GPR6P46095 362 aaPredicted RBP8.6□□□□□ -1.03
VPS28-204ENST00000526054 MMP15P51511 669 aa8.6□□□□□ -1.03
VPS28-204ENST00000526054 KLHL22Q53GT1 634 aa8.6□□□□□ -1.03
VPS28-204ENST00000526054 FAM209AQ5JX71 171 aa8.6□□□□□ -1.03
VPS28-204ENST00000526054 OR2T2Q6IF00 324 aa8.6□□□□□ -1.03
VPS28-204ENST00000526054 PLEKHG7Q6ZR37 379 aa8.6□□□□□ -1.03
VPS28-204ENST00000526054 USP51Q70EK9 711 aa8.6□□□□□ -1.03
VPS28-204ENST00000526054 PRSS45Q7RTY3 260 aa8.6□□□□□ -1.03
VPS28-204ENST00000526054 ACBD7Q8N6N7 88 aa8.6□□□□□ -1.03
VPS28-204ENST00000526054 YIPF7Q8N8F6 280 aa8.6□□□□□ -1.03
VPS28-204ENST00000526054 OR2AE1Q8NHA4 323 aa8.6□□□□□ -1.03
VPS28-204ENST00000526054 CNIH3Q8TBE1 160 aa8.6□□□□□ -1.03
VPS28-204ENST00000526054 SPRYD4Q8WW59 207 aaPredicted RBP8.6□□□□□ -1.03
VPS28-204ENST00000526054 LGALS12Q96DT0 336 aa8.6□□□□□ -1.03
VPS28-204ENST00000526054 REEP6Q96HR9 211 aa8.6□□□□□ -1.03
VPS28-204ENST00000526054 EGLN1Q9GZT9 426 aa8.6□□□□□ -1.03
VPS28-204ENST00000526054 AMBNQ9NP70 447 aa8.6□□□□□ -1.03
VPS28-204ENST00000526054 INPP5EQ9NRR6 644 aa8.6□□□□□ -1.03
VPS28-204ENST00000526054 NKIRAS2Q9NYR9 191 aa8.6□□□□□ -1.03
VPS28-204ENST00000526054 MRM2Q9UI43 246 aaKnown RBP8.6□□□□□ -1.03
VPS28-204ENST00000526054 ZNF391Q9UJN7 358 aa8.6□□□□□ -1.03
VPS28-204ENST00000526054 ZDHHC8Q9ULC8 765 aa8.6□□□□□ -1.03
VPS28-204ENST00000526054 EXOGQ9Y2C4 368 aaKnown RBP8.6□□□□□ -1.03
VPS28-204ENST00000526054 METTL15A6NJ78 407 aa8.59□□□□□ -1.03
VPS28-204ENST00000526054 LOC110117498-PIK3R3F6TDL0 507 aa8.59□□□□□ -1.03
VPS28-204ENST00000526054 SPRY3O43610 288 aa8.59□□□□□ -1.03
VPS28-204ENST00000526054 IGHV1-46P01743 117 aa8.59□□□□□ -1.03
VPS28-204ENST00000526054 HPXP02790 462 aa8.59□□□□□ -1.03
VPS28-204ENST00000526054 ADH4P08319 380 aa8.59□□□□□ -1.03
VPS28-204ENST00000526054 GNAO1P09471 354 aa8.59□□□□□ -1.03
VPS28-204ENST00000526054 MYF6P23409 242 aa8.59□□□□□ -1.03
VPS28-204ENST00000526054 MMP16P51512 607 aa8.59□□□□□ -1.03
VPS28-204ENST00000526054 ISL1P61371 349 aa8.59□□□□□ -1.03
VPS28-204ENST00000526054 ACTA2P62736 377 aa8.59□□□□□ -1.03
VPS28-204ENST00000526054 ACTG2P63267 376 aa8.59□□□□□ -1.03
VPS28-204ENST00000526054 ZNF85Q03923 595 aa8.59□□□□□ -1.03
VPS28-204ENST00000526054 ZNF92Q03936 586 aa8.59□□□□□ -1.03
VPS28-204ENST00000526054 TSTQ16762 297 aaKnown RBP8.59□□□□□ -1.03
VPS28-204ENST00000526054 GFOD2Q3B7J2 385 aa8.59□□□□□ -1.03
VPS28-204ENST00000526054 TMEM255AQ5JRV8 349 aa8.59□□□□□ -1.03
VPS28-204ENST00000526054 SSX6Q7RTT6 188 aa8.59□□□□□ -1.03
VPS28-204ENST00000526054 THAP5Q7Z6K1 395 aa8.59□□□□□ -1.03
VPS28-204ENST00000526054 OR5AS1Q8N127 324 aa8.59□□□□□ -1.03
VPS28-204ENST00000526054 BHLHE23Q8NDY6 225 aa8.59□□□□□ -1.03
VPS28-204ENST00000526054 OR8G5Q8NG78 346 aa8.59□□□□□ -1.03
VPS28-204ENST00000526054 OR8B12Q8NGG6 310 aa8.59□□□□□ -1.03
VPS28-204ENST00000526054 OR13G1Q8NGZ3 307 aa8.59□□□□□ -1.03
VPS28-204ENST00000526054 CLDND2Q8NHS1 167 aa8.59□□□□□ -1.03
VPS28-204ENST00000526054 GTF3AQ92664 365 aaKnown RBP8.59□□□□□ -1.03
VPS28-204ENST00000526054 RDH5Q92781 318 aa8.59□□□□□ -1.03
VPS28-204ENST00000526054 SPSB4Q96A44 273 aa8.59□□□□□ -1.03
VPS28-204ENST00000526054 ELMOD3Q96FG2 381 aa8.59□□□□□ -1.03
VPS28-204ENST00000526054 OCEL1Q9H607 264 aa8.59□□□□□ -1.03
VPS28-204ENST00000526054 METTL17Q9H7H0 456 aaPredicted RBP8.59□□□□□ -1.03
VPS28-204ENST00000526054 SAP30LQ9HAJ7 183 aa8.59□□□□□ -1.03
VPS28-204ENST00000526054 LPAR2Q9HBW0 351 aa8.59□□□□□ -1.03
VPS28-204ENST00000526054 MSL2Q9HCI7 577 aa8.59□□□□□ -1.03
VPS28-204ENST00000526054 DECR2Q9NUI1 292 aa8.59□□□□□ -1.03
VPS28-204ENST00000526054 MRPS18AQ9NVS2 196 aaKnown RBP8.59□□□□□ -1.03
VPS28-204ENST00000526054 FAM206AQ9NX38 181 aa8.59□□□□□ -1.03
VPS28-204ENST00000526054 METRNQ9UJH8 293 aa8.59□□□□□ -1.03
VPS28-204ENST00000526054 GNG8Q9UK08 70 aa8.59□□□□□ -1.03
VPS28-204ENST00000526054 GTF2A1LQ9UNN4 478 aa8.59□□□□□ -1.03
VPS28-204ENST00000526054 NOP16Q9Y3C1 178 aaKnown RBP8.59□□□□□ -1.03
VPS28-204ENST00000526054 R4GMQ9 66 aa8.59□□□□□ -1.03
VPS28-204ENST00000526054 TANC2Q9HCD6 1990 aa8.59□□□□□ -1.03
VPS28-204ENST00000526054 hCG_38984A0A1B0GV85 526 aa8.58□□□□□ -1.04
VPS28-204ENST00000526054 C5orf63A6NC05 138 aa8.58□□□□□ -1.04
VPS28-204ENST00000526054 CD300LBA8K4G0 201 aa8.58□□□□□ -1.04
VPS28-204ENST00000526054 J3QRE1 110 aa8.58□□□□□ -1.04
VPS28-204ENST00000526054 MAGEB4O15481 346 aaPredicted RBP8.58□□□□□ -1.04
VPS28-204ENST00000526054 NCR1O76036 304 aa8.58□□□□□ -1.04
VPS28-204ENST00000526054 RPP14O95059 124 aaKnown RBP8.58□□□□□ -1.04
VPS28-204ENST00000526054 IGHA1P01876 353 aa8.58□□□□□ -1.04
VPS28-204ENST00000526054 MSMBP08118 114 aa8.58□□□□□ -1.04
VPS28-204ENST00000526054 CD55P08174 381 aa8.58□□□□□ -1.04
VPS28-204ENST00000526054 ANOS1P23352 680 aa8.58□□□□□ -1.04
VPS28-204ENST00000526054 DDOSTP39656 456 aa8.58□□□□□ -1.04
VPS28-204ENST00000526054 MAGEB1P43366 347 aa8.58□□□□□ -1.04
VPS28-204ENST00000526054 PRSS12P56730 875 aa8.58□□□□□ -1.04
VPS28-204ENST00000526054 MRPS11P82912 194 aaKnown RBP8.58□□□□□ -1.04
VPS28-204ENST00000526054 TNFAIP6P98066 277 aaPredicted RBP8.58□□□□□ -1.04
VPS28-204ENST00000526054 SCGB2A2Q13296 93 aa8.58□□□□□ -1.04
VPS28-204ENST00000526054 CDK5R2Q13319 367 aa8.58□□□□□ -1.04
VPS28-204ENST00000526054 SMN1Q16637 294 aaKnown RBP8.58□□□□□ -1.04
VPS28-204ENST00000526054 CDONQ4KMG0 1287 aa8.58□□□□□ -1.04
VPS28-204ENST00000526054 TP53I3Q53FA7 332 aa8.58□□□□□ -1.04
VPS28-204ENST00000526054 BCL2L15Q5TBC7 163 aa8.58□□□□□ -1.04
VPS28-204ENST00000526054 KCTD20Q7Z5Y7 419 aa8.58□□□□□ -1.04
VPS28-204ENST00000526054 COMMD2Q86X83 199 aa8.58□□□□□ -1.04
VPS28-204ENST00000526054 FTMTQ8N4E7 242 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms