RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 TUBG1P23258 451 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 SLC6A6P31641 620 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 RAD23AP54725 363 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 ESRRGP62508 458 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 EGR3Q06889 387 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 AQP6Q13520 282 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 KRR1Q13601 381 aaKnown RBP5.44□□□□□ -1.54
CD44-221ENST00000526000 GK2Q14410 553 aaPredicted RBP5.44□□□□□ -1.54
CD44-221ENST00000526000 RCN1Q15293 331 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 SEC23BQ15437 767 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 OR8G1Q15617 311 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 CLEC12AQ5QGZ9 265 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 METTL11BQ5VVY1 283 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 GPR139Q6DWJ6 353 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 PGBD2Q6P3X8 592 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 FAHD1Q6P587 224 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 SMARCD3Q6STE5 483 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 FBXW12Q6X9E4 464 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 DPY19L2P2Q6ZN68 376 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 DCDC5Q6ZRR9 648 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 BTN2A1Q7KYR7 527 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 GLB1L2Q8IW92 636 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 PNKDQ8N490 385 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 OR52L1Q8NGH7 329 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 SSMEM1Q8WWF3 244 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 GATAD2BQ8WXI9 593 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 ST8SIA4Q92187 359 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 APOBEC3DQ96AK3 386 aaPredicted RBP5.44□□□□□ -1.54
CD44-221ENST00000526000 COG8Q96MW5 612 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 CCL13Q99616 98 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 PRRG3Q9BZD7 231 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 FN3KQ9H479 309 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 PRDM13Q9H4Q3 707 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 RNPEPL1Q9HAU8 725 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 SIRT7Q9NRC8 400 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 TUBG2Q9NRH3 451 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 C1orf123Q9NWV4 160 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 IL20Q9NYY1 176 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 USE1Q9NZ43 259 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 VSX1Q9NZR4 365 aaPredicted RBP5.44□□□□□ -1.54
CD44-221ENST00000526000 KIF17Q9P2E2 1029 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 ONECUT1Q9UBC0 465 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 RNF7Q9UBF6 113 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 RRP15Q9Y3B9 282 aaKnown RBP5.44□□□□□ -1.54
CD44-221ENST00000526000 FAM96BQ9Y3D0 163 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 LHFPL6Q9Y693 200 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 CDH10Q9Y6N8 788 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 U3KQV3 271 aa5.44□□□□□ -1.54
CD44-221ENST00000526000 DOCK11Q5JSL3 2073 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 A0A1B0GW55 424 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 GGT3PA6NGU5 568 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 ANKRD65E5RJM6 399 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 H0YJX3 145 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 DVL1O14640 695 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 PHYHO14832 338 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 ARPC3O15145 178 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 FCN3O75636 299 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 ALX3O95076 343 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 BAG2O95816 211 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 GASTP01350 101 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 HLA-DQA2P01906 255 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 TFF1P04155 84 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 CSF1P09603 554 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 ACSM4P0C7M7 580 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 DUX4L2P0CJ85 424 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 DUX4L3P0CJ86 424 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 DUX4L4P0CJ87 422 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 DUX4L5P0CJ88 424 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 DUX4L6P0CJ89 424 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 DUX4L7P0CJ90 424 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 OSMP13725 252 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 MMP9P14780 707 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 ANOS1P23352 680 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 PAX6P26367 422 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 GGT2P36268 569 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 PSMB10P40306 273 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 RPS27P42677 84 aaKnown RBP5.43□□□□□ -1.54
CD44-221ENST00000526000 IER3P46695 156 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 RGS6P49758 472 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 ALDH3A2P51648 485 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 RPS6KA3P51812 740 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 PROK1P58294 105 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 LSM6P62312 80 aaKnown RBP5.43□□□□□ -1.54
CD44-221ENST00000526000 SLC34A1Q06495 639 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 KLRD1Q13241 179 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 FAM189A2Q15884 450 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 LY6EQ16553 131 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 CD276Q5ZPR3 534 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 KDM4DQ6B0I6 523 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 SLC35E4Q6ICL7 350 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 DUX4L9Q6RFH8 374 aaPredicted RBP5.43□□□□□ -1.54
CD44-221ENST00000526000 CFAP77Q6ZQR2 320 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 ZBTB49Q6ZSB9 765 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 PGAP1Q75T13 922 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 MRPL21Q7Z2W9 205 aaKnown RBP5.43□□□□□ -1.54
CD44-221ENST00000526000 FAM122BQ7Z309 247 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 AMIGO2Q86SJ2 522 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 ADCK1Q86TW2 530 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 AQP11Q8NBQ7 271 aa5.43□□□□□ -1.54
CD44-221ENST00000526000 GJC3Q8NFK1 279 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms