RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 C2orf68Q2NKX9 166 aa19.7■□□□□ 0.74
USP47-205ENST00000525257 WDR38Q5JTN6 314 aa19.7■□□□□ 0.74
USP47-205ENST00000525257 DCXRQ7Z4W1 244 aa19.7■□□□□ 0.74
USP47-205ENST00000525257 OR51L1Q8NGJ5 315 aa19.7■□□□□ 0.74
USP47-205ENST00000525257 OR8S1Q8NH09 359 aa19.7■□□□□ 0.74
USP47-205ENST00000525257 LRRC29Q8WV35 223 aa19.7■□□□□ 0.74
USP47-205ENST00000525257 ZNRF4Q8WWF5 429 aa19.7■□□□□ 0.74
USP47-205ENST00000525257 DNAJB11Q9UBS4 358 aa19.7■□□□□ 0.74
USP47-205ENST00000525257 VPREB3Q9UKI3 123 aa19.7■□□□□ 0.74
USP47-205ENST00000525257 BTBD17A6NE02 478 aa19.69■□□□□ 0.74
USP47-205ENST00000525257 GSSP48637 474 aa19.69■□□□□ 0.74
USP47-205ENST00000525257 TAF13Q15543 124 aa19.69■□□□□ 0.74
USP47-205ENST00000525257 MICBQ29980 383 aa19.69■□□□□ 0.74
USP47-205ENST00000525257 WDR86Q86TI4 376 aa19.69■□□□□ 0.74
USP47-205ENST00000525257 RNF148Q8N7C7 305 aa19.69■□□□□ 0.74
USP47-205ENST00000525257 FAM216BQ8N7L0 139 aa19.69■□□□□ 0.74
USP47-205ENST00000525257 OR4C15Q8NGM1 316 aa19.69■□□□□ 0.74
USP47-205ENST00000525257 OPA3Q9H6K4 179 aa19.69■□□□□ 0.74
USP47-205ENST00000525257 EGLN3Q9H6Z9 239 aa19.69■□□□□ 0.74
USP47-205ENST00000525257 CENPMQ9NSP4 180 aa19.69■□□□□ 0.74
USP47-205ENST00000525257 ARGLU1Q9NWB6 273 aaPredicted RBP19.69■□□□□ 0.74
USP47-205ENST00000525257 CAB39Q9Y376 341 aaPredicted RBP19.69■□□□□ 0.74
USP47-205ENST00000525257 ZNF816-ZNF321PA0A0X1KG74 233 aa19.68■□□□□ 0.74
USP47-205ENST00000525257 A0A1W2PRD5 423 aa19.68■□□□□ 0.74
USP47-205ENST00000525257 A0A1W2PRF3 423 aa19.68■□□□□ 0.74
USP47-205ENST00000525257 A0A1W2PRM7 423 aa19.68■□□□□ 0.74
USP47-205ENST00000525257 ANKRD30BLA7E2S9 258 aa19.68■□□□□ 0.74
USP47-205ENST00000525257 CCDC22O60826 627 aa19.68■□□□□ 0.74
USP47-205ENST00000525257 GMNNO75496 209 aa19.68■□□□□ 0.74
USP47-205ENST00000525257 SEMG1P04279 462 aa19.68■□□□□ 0.74
USP47-205ENST00000525257 SPARCP09486 303 aa19.68■□□□□ 0.74
USP47-205ENST00000525257 DLX1P56177 255 aa19.68■□□□□ 0.74
USP47-205ENST00000525257 CSNK2BP67870 215 aa19.68■□□□□ 0.74
USP47-205ENST00000525257 EGR3Q06889 387 aa19.68■□□□□ 0.74
USP47-205ENST00000525257 ZDHHC21Q8IVQ6 265 aa19.68■□□□□ 0.74
USP47-205ENST00000525257 C11orf53Q8IXP5 236 aa19.68■□□□□ 0.74
USP47-205ENST00000525257 LY6G5BQ8NDX9 201 aa19.68■□□□□ 0.74
USP47-205ENST00000525257 SLAMF6Q96DU3 332 aa19.68■□□□□ 0.74
USP47-205ENST00000525257 SEH1LQ96EE3 360 aa19.68■□□□□ 0.74
USP47-205ENST00000525257 KCNJ15Q99712 375 aa19.68■□□□□ 0.74
USP47-205ENST00000525257 COMMD3-BMI1R4GMX3 469 aa19.68■□□□□ 0.74
USP47-205ENST00000525257 TET2Q6N021 2002 aaPredicted RBP19.68■□□□□ 0.74
USP47-205ENST00000525257 TBX1O43435 398 aa19.67■□□□□ 0.74
USP47-205ENST00000525257 XRCC2O43543 280 aa19.67■□□□□ 0.74
USP47-205ENST00000525257 MUC1P15941 1255 aaPredicted RBP19.67■□□□□ 0.74
USP47-205ENST00000525257 GRK5P34947 590 aa19.67■□□□□ 0.74
USP47-205ENST00000525257 IFNGR2P38484 337 aa19.67■□□□□ 0.74
USP47-205ENST00000525257 TSPAN31Q12999 210 aa19.67■□□□□ 0.74
USP47-205ENST00000525257 KLRD1Q13241 179 aa19.67■□□□□ 0.74
USP47-205ENST00000525257 IKZF1Q13422 519 aa19.67■□□□□ 0.74
USP47-205ENST00000525257 DPY19L4Q7Z388 723 aa19.67■□□□□ 0.74
USP47-205ENST00000525257 CMTM4Q8IZR5 234 aa19.67■□□□□ 0.74
USP47-205ENST00000525257 OR9Q1Q8NGQ5 310 aa19.67■□□□□ 0.74
USP47-205ENST00000525257 OR2T4Q8NH00 348 aa19.67■□□□□ 0.74
USP47-205ENST00000525257 GNPDA2Q8TDQ7 276 aa19.67■□□□□ 0.74
USP47-205ENST00000525257 PYURFQ96I23 114 aa19.67■□□□□ 0.74
USP47-205ENST00000525257 DDOQ99489 341 aa19.67■□□□□ 0.74
USP47-205ENST00000525257 RNPEPL1Q9HAU8 725 aa19.67■□□□□ 0.74
USP47-205ENST00000525257 RNASEK-C17orf49H0YIS7 233 aa19.66■□□□□ 0.74
USP47-205ENST00000525257 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP19.66■□□□□ 0.74
USP47-205ENST00000525257 ACOT8O14734 319 aa19.66■□□□□ 0.74
USP47-205ENST00000525257 TSPAN9O75954 239 aa19.66■□□□□ 0.74
USP47-205ENST00000525257 CSF1P09603 554 aa19.66■□□□□ 0.74
USP47-205ENST00000525257 H2AFXP16104 143 aaPredicted RBP19.66■□□□□ 0.74
USP47-205ENST00000525257 EEF1B2P24534 225 aaKnown RBP19.66■□□□□ 0.74
USP47-205ENST00000525257 RRM2P31350 389 aa19.66■□□□□ 0.74
USP47-205ENST00000525257 METAP1DQ6UB28 335 aaPredicted RBP19.66■□□□□ 0.74
USP47-205ENST00000525257 WDR82Q6UXN9 313 aa19.66■□□□□ 0.74
USP47-205ENST00000525257 SLC36A1Q7Z2H8 476 aa19.66■□□□□ 0.74
USP47-205ENST00000525257 OR1M1Q8NGA1 313 aa19.66■□□□□ 0.74
USP47-205ENST00000525257 OR52L1Q8NGH7 329 aa19.66■□□□□ 0.74
USP47-205ENST00000525257 NPRL2Q8WTW4 380 aa19.66■□□□□ 0.74
USP47-205ENST00000525257 SPAG4Q9NPE6 437 aa19.66■□□□□ 0.74
USP47-205ENST00000525257 NPFFO15130 113 aa19.65■□□□□ 0.74
USP47-205ENST00000525257 NDUFB3O43676 98 aa19.65■□□□□ 0.74
USP47-205ENST00000525257 TGFBR2P37173 567 aa19.65■□□□□ 0.74
USP47-205ENST00000525257 DDOSTP39656 456 aa19.65■□□□□ 0.74
USP47-205ENST00000525257 ENTPD1P49961 510 aa19.65■□□□□ 0.74
USP47-205ENST00000525257 GUCA2AQ02747 115 aa19.65■□□□□ 0.74
USP47-205ENST00000525257 PGBD2Q6P3X8 592 aa19.65■□□□□ 0.74
USP47-205ENST00000525257 SLC16A9Q7RTY1 509 aa19.65■□□□□ 0.74
USP47-205ENST00000525257 PNKDQ8N490 385 aa19.65■□□□□ 0.74
USP47-205ENST00000525257 Q8N7P7 452 aa19.65■□□□□ 0.74
USP47-205ENST00000525257 SPSB4Q96A44 273 aa19.65■□□□□ 0.74
USP47-205ENST00000525257 PPP1R3EQ9H7J1 279 aa19.65■□□□□ 0.74
USP47-205ENST00000525257 GORASP2Q9H8Y8 452 aa19.65■□□□□ 0.74
USP47-205ENST00000525257 PRPF19Q9UMS4 504 aaKnown RBP19.65■□□□□ 0.74
USP47-205ENST00000525257 CDH10Q9Y6N8 788 aa19.65■□□□□ 0.74
USP47-205ENST00000525257 ZNF878C9JN71 531 aa19.64■□□□□ 0.73
USP47-205ENST00000525257 SELLP14151 372 aa19.64■□□□□ 0.73
USP47-205ENST00000525257 GMFBP60983 142 aa19.64■□□□□ 0.73
USP47-205ENST00000525257 FAM3AP98173 230 aa19.64■□□□□ 0.73
USP47-205ENST00000525257 TIGD6Q17RP2 521 aa19.64■□□□□ 0.73
USP47-205ENST00000525257 ZNF511Q8NB15 262 aa19.64■□□□□ 0.73
USP47-205ENST00000525257 SLC37A3Q8NCC5 494 aa19.64■□□□□ 0.73
USP47-205ENST00000525257 OR5T2Q8NGG2 359 aa19.64■□□□□ 0.73
USP47-205ENST00000525257 H1FXQ92522 213 aaKnown RBP19.64■□□□□ 0.73
USP47-205ENST00000525257 MCUR1Q96AQ8 359 aa19.64■□□□□ 0.73
USP47-205ENST00000525257 DCTN5Q9BTE1 182 aa19.64■□□□□ 0.73
USP47-205ENST00000525257 ANKRD61A6NGH8 418 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms