RNA–Protein interactions for RNA: ENST00000525214.1

COPB1-203, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-203ENST00000525214 ECH1Q13011 328 aa1.76□□□□□ -2.13
COPB1-203ENST00000525214 SELENBP1Q13228 472 aa1.76□□□□□ -2.13
COPB1-203ENST00000525214 RBMY1FQ15415 496 aaKnown RBP1.76□□□□□ -2.13
COPB1-203ENST00000525214 SPESP1Q6UW49 350 aa1.76□□□□□ -2.13
COPB1-203ENST00000525214 CMC1Q7Z7K0 106 aa1.76□□□□□ -2.13
COPB1-203ENST00000525214 IQCF2Q8IXL9 164 aa1.76□□□□□ -2.13
COPB1-203ENST00000525214 ZFP41Q8N8Y5 198 aa1.76□□□□□ -2.13
COPB1-203ENST00000525214 INO80EQ8NBZ0 244 aaPredicted RBP1.76□□□□□ -2.13
COPB1-203ENST00000525214 FBXL13Q8NEE6 735 aa1.76□□□□□ -2.13
COPB1-203ENST00000525214 OR13C9Q8NGT0 318 aa1.76□□□□□ -2.13
COPB1-203ENST00000525214 CXorf40AQ8TE69 158 aa1.76□□□□□ -2.13
COPB1-203ENST00000525214 KIAA1143Q96AT1 154 aaPredicted RBP1.76□□□□□ -2.13
COPB1-203ENST00000525214 CSPG4P5Q96PW8 444 aa1.76□□□□□ -2.13
COPB1-203ENST00000525214 KLF6Q99612 283 aaPredicted RBP1.76□□□□□ -2.13
COPB1-203ENST00000525214 SLC29A1Q99808 456 aa1.76□□□□□ -2.13
COPB1-203ENST00000525214 ZYG11BQ9C0D3 744 aa1.76□□□□□ -2.13
COPB1-203ENST00000525214 OR51M1Q9H341 326 aa1.76□□□□□ -2.13
COPB1-203ENST00000525214 GAL3ST2Q9H3Q3 398 aa1.76□□□□□ -2.13
COPB1-203ENST00000525214 FBXO44Q9H4M3 255 aa1.76□□□□□ -2.13
COPB1-203ENST00000525214 AGPAT3Q9NRZ7 376 aa1.76□□□□□ -2.13
COPB1-203ENST00000525214 MYEF2Q9P2K5 600 aaKnown RBP1.76□□□□□ -2.13
COPB1-203ENST00000525214 ZMAT5Q9UDW3 170 aaKnown RBP1.76□□□□□ -2.13
COPB1-203ENST00000525214 ING4Q9UNL4 249 aa1.76□□□□□ -2.13
COPB1-203ENST00000525214 RHBDD3Q9Y3P4 386 aa1.76□□□□□ -2.13
COPB1-203ENST00000525214 SAMHD1Q9Y3Z3 626 aaKnown RBP1.76□□□□□ -2.13
COPB1-203ENST00000525214 IGHV7-4-1A0A0J9YVY3 117 aa1.75□□□□□ -2.13
COPB1-203ENST00000525214 LYRM9A8MSI8 78 aa1.75□□□□□ -2.13
COPB1-203ENST00000525214 TSPAN13O95857 204 aa1.75□□□□□ -2.13
COPB1-203ENST00000525214 NPPAP01160 153 aa1.75□□□□□ -2.13
COPB1-203ENST00000525214 CD82P27701 267 aa1.75□□□□□ -2.13
COPB1-203ENST00000525214 SPAM1P38567 509 aa1.75□□□□□ -2.13
COPB1-203ENST00000525214 RND2P52198 227 aa1.75□□□□□ -2.13
COPB1-203ENST00000525214 YWHAEP62258 255 aaKnown RBP1.75□□□□□ -2.13
COPB1-203ENST00000525214 ILKQ13418 452 aa1.75□□□□□ -2.13
COPB1-203ENST00000525214 VAMP3Q15836 100 aa1.75□□□□□ -2.13
COPB1-203ENST00000525214 USF2Q15853 346 aaPredicted RBP1.75□□□□□ -2.13
COPB1-203ENST00000525214 PPM1LQ5SGD2 360 aa1.75□□□□□ -2.13
COPB1-203ENST00000525214 ULK3Q6PHR2 472 aa1.75□□□□□ -2.13
COPB1-203ENST00000525214 Q6ZSR3 168 aa1.75□□□□□ -2.13
COPB1-203ENST00000525214 MRPL21Q7Z2W9 205 aaKnown RBP1.75□□□□□ -2.13
COPB1-203ENST00000525214 ST13P4Q8IZP2 240 aaPredicted RBP1.75□□□□□ -2.13
COPB1-203ENST00000525214 CMTM8Q8IZV2 173 aa1.75□□□□□ -2.13
COPB1-203ENST00000525214 PDIK1LQ8N165 341 aa1.75□□□□□ -2.13
COPB1-203ENST00000525214 EID2Q8N6I1 236 aa1.75□□□□□ -2.13
COPB1-203ENST00000525214 OR1S2Q8NGQ3 325 aa1.75□□□□□ -2.13
COPB1-203ENST00000525214 LYPD6BQ8NI32 183 aa1.75□□□□□ -2.13
COPB1-203ENST00000525214 LRRC20Q8TCA0 184 aa1.75□□□□□ -2.13
COPB1-203ENST00000525214 PIH1D2Q8WWB5 315 aa1.75□□□□□ -2.13
COPB1-203ENST00000525214 NAT6Q93015 286 aa1.75□□□□□ -2.13
COPB1-203ENST00000525214 TOP1MTQ969P6 601 aa1.75□□□□□ -2.13
COPB1-203ENST00000525214 ZBED3Q96IU2 234 aaPredicted RBP1.75□□□□□ -2.13
COPB1-203ENST00000525214 RBBP8Q99708 897 aa1.75□□□□□ -2.13
COPB1-203ENST00000525214 ZSCAN16Q9H4T2 348 aaPredicted RBP1.75□□□□□ -2.13
COPB1-203ENST00000525214 FGF20Q9NP95 211 aaPredicted RBP1.75□□□□□ -2.13
COPB1-203ENST00000525214 HRASLS2Q9NWW9 162 aa1.75□□□□□ -2.13
COPB1-203ENST00000525214 PTTG3PQ9NZH4 202 aa1.75□□□□□ -2.13
COPB1-203ENST00000525214 CHMP5Q9NZZ3 219 aa1.75□□□□□ -2.13
COPB1-203ENST00000525214 CCDC59Q9P031 241 aaKnown RBP1.75□□□□□ -2.13
COPB1-203ENST00000525214 LGALS13Q9UHV8 139 aa1.75□□□□□ -2.13
COPB1-203ENST00000525214 FLVCR2Q9UPI3 526 aa1.75□□□□□ -2.13
COPB1-203ENST00000525214 SLC17A4Q9Y2C5 497 aa1.75□□□□□ -2.13
COPB1-203ENST00000525214 NEURL4Q96JN8 1562 aa1.75□□□□□ -2.13
COPB1-203ENST00000525214 DENND4AQ7Z401 1863 aa1.75□□□□□ -2.13
COPB1-203ENST00000525214 MAP3K19Q56UN5 1328 aa1.74□□□□□ -2.13
COPB1-203ENST00000525214 TEX46H3BTG2 121 aa1.74□□□□□ -2.13
COPB1-203ENST00000525214 PPP1R2P9O14990 202 aa1.74□□□□□ -2.13
COPB1-203ENST00000525214 CETN3O15182 167 aa1.74□□□□□ -2.13
COPB1-203ENST00000525214 XRCC2O43543 280 aa1.74□□□□□ -2.13
COPB1-203ENST00000525214 EIF4E2O60573 245 aaKnown RBP1.74□□□□□ -2.13
COPB1-203ENST00000525214 FCN3O75636 299 aa1.74□□□□□ -2.13
COPB1-203ENST00000525214 CLPXO76031 633 aa1.74□□□□□ -2.13
COPB1-203ENST00000525214 CD99P14209 185 aa1.74□□□□□ -2.13
COPB1-203ENST00000525214 CCNOP22674 350 aa1.74□□□□□ -2.13
COPB1-203ENST00000525214 TUBG1P23258 451 aa1.74□□□□□ -2.13
COPB1-203ENST00000525214 WARSP23381 471 aaKnown RBP1.74□□□□□ -2.13
COPB1-203ENST00000525214 F2RP25116 425 aa1.74□□□□□ -2.13
COPB1-203ENST00000525214 PSMD4P55036 377 aaKnown RBP1.74□□□□□ -2.13
COPB1-203ENST00000525214 STXBP1P61764 594 aaKnown RBP1.74□□□□□ -2.13
COPB1-203ENST00000525214 IRF8Q02556 426 aa1.74□□□□□ -2.13
COPB1-203ENST00000525214 SLC25A11Q02978 314 aaKnown RBP1.74□□□□□ -2.13
COPB1-203ENST00000525214 ZNF33AQ06730 810 aa1.74□□□□□ -2.13
COPB1-203ENST00000525214 TNFRSF9Q07011 255 aa1.74□□□□□ -2.13
COPB1-203ENST00000525214 SYCP1Q15431 976 aa1.74□□□□□ -2.13
COPB1-203ENST00000525214 ZNF829Q3KNS6 432 aaPredicted RBP1.74□□□□□ -2.13
COPB1-203ENST00000525214 SLC25A25Q6KCM7 469 aa1.74□□□□□ -2.13
COPB1-203ENST00000525214 CMTM1Q8IZ96 169 aa1.74□□□□□ -2.13
COPB1-203ENST00000525214 SYCE1Q8N0S2 351 aa1.74□□□□□ -2.13
COPB1-203ENST00000525214 TCAIMQ8N3R3 496 aa1.74□□□□□ -2.13
COPB1-203ENST00000525214 ASCC1Q8N9N2 400 aaKnown RBP1.74□□□□□ -2.13
COPB1-203ENST00000525214 MNS1Q8NEH6 495 aa1.74□□□□□ -2.13
COPB1-203ENST00000525214 PHOSPHO2Q8TCD6 241 aa1.74□□□□□ -2.13
COPB1-203ENST00000525214 SLC7A13Q8TCU3 470 aa1.74□□□□□ -2.13
COPB1-203ENST00000525214 CAPSLQ8WWF8 208 aa1.74□□□□□ -2.13
COPB1-203ENST00000525214 ZNF707Q96C28 371 aaPredicted RBP1.74□□□□□ -2.13
COPB1-203ENST00000525214 HSD17B10Q99714 261 aaKnown RBP1.74□□□□□ -2.13
COPB1-203ENST00000525214 TM6SF2Q9BZW4 377 aa1.74□□□□□ -2.13
COPB1-203ENST00000525214 UCK2Q9BZX2 261 aa1.74□□□□□ -2.13
COPB1-203ENST00000525214 ACTR3CQ9C0K3 210 aaPredicted RBP1.74□□□□□ -2.13
COPB1-203ENST00000525214 PIGUQ9H490 435 aa1.74□□□□□ -2.13
COPB1-203ENST00000525214 TUBG2Q9NRH3 451 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms