RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 LRRIQ3A6PVS8 624 aaPredicted RBP2.35□□□□□ -2.03
CSDE1-209ENST00000525132 FAM166BA8MTA8 275 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 E7ESA3 106 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 H7C417 338 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 M0R2N4 97 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 HSD17B6O14756 317 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 RAB29O14966 203 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 CXCL13O43927 109 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 MGRN1O60291 552 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 CCNB2O95067 398 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 YEATS4O95619 227 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 OXSR1O95747 527 aaPredicted RBP2.35□□□□□ -2.03
CSDE1-209ENST00000525132 SERPINE2P07093 398 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 CALM1P0DP23 149 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 CALM2P0DP24 149 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 CALM3P0DP25 149 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 CXCL8P10145 99 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 COX6A1P12074 109 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 COX5AP20674 150 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 LMO2P25791 158 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 FGF9P31371 208 aaPredicted RBP2.35□□□□□ -2.03
CSDE1-209ENST00000525132 CD79BP40259 229 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 GPR4P46093 362 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 CX3CR1P49238 355 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 DAP3P51398 398 aaKnown RBP2.35□□□□□ -2.03
CSDE1-209ENST00000525132 CCNG1P51959 295 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 SLC8A3P57103 927 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 LINC01547P58512 204 aaPredicted RBP2.35□□□□□ -2.03
CSDE1-209ENST00000525132 RAB10P61026 200 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 RAD51Q06609 339 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 SCRN3Q0VDG4 424 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 CDH17Q12864 832 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 TRDNQ13061 729 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 SLAQ13239 276 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 XRCC4Q13426 336 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 RCAN2Q14206 197 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 OXA1LQ15070 435 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 MS4A13Q5J8X5 152 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 C6orf183Q5T699 404 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 C9orf135Q5VTT2 229 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 ZNF57Q68EA5 555 aaPredicted RBP2.35□□□□□ -2.03
CSDE1-209ENST00000525132 PVRIGQ6DKI7 326 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 OR52W1Q6IF63 320 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 REEP3Q6NUK4 255 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 ERICH5Q6P6B1 374 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 RFWD3Q6PCD5 774 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 CCDC137Q6PK04 289 aaKnown RBP2.35□□□□□ -2.03
CSDE1-209ENST00000525132 FRRS1Q6ZNA5 592 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 Q6ZRP5 223 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 Q6ZTC4 211 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 STXBP4Q6ZWJ1 553 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 SLC16A14Q7RTX9 510 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 SPATA24Q86W54 205 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 NUDCD3Q8IVD9 361 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 TPRX1Q8N7U7 411 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 TMEM104Q8NE00 496 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 NUP37Q8NFH4 326 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 OR10V1Q8NGI7 309 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 OR51L1Q8NGJ5 315 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 OR2A12Q8NGT7 310 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 OR51F2Q8NH61 342 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 TCTEX1D2Q8WW35 142 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.35□□□□□ -2.031e-7■■■■□ 24.2
CSDE1-209ENST00000525132 STMN2Q93045 179 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 C11orf52Q96A22 123 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 NTAN1Q96AB6 310 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 ZNF524Q96C55 264 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 CCDC126Q96EE4 140 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 ATP5SQ99766 215 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 NAT10Q9H0A0 1025 aaKnown RBP2.35□□□□□ -2.03
CSDE1-209ENST00000525132 RACGAP1Q9H0H5 632 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 OR2AG1Q9H205 316 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 OR51M1Q9H341 326 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 PPDPFQ9H3Y8 114 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 SPACA1Q9HBV2 294 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 SDF2L1Q9HCN8 221 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 NANSQ9NR45 359 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 PAK1IP1Q9NWT1 392 aaPredicted RBP2.35□□□□□ -2.03
CSDE1-209ENST00000525132 SLC2A6Q9UGQ3 507 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 FLVCR2Q9UPI3 526 aa2.35□□□□□ -2.03
CSDE1-209ENST00000525132 KCNE1BA0A087WTH5 132 aa2.34□□□□□ -2.03
CSDE1-209ENST00000525132 KBTBD11-OT1A0A1B0GTJ5 212 aa2.34□□□□□ -2.03
CSDE1-209ENST00000525132 TEX48A0A1B0GUV7 120 aa2.34□□□□□ -2.03
CSDE1-209ENST00000525132 TMEM120BA0PK00 339 aa2.34□□□□□ -2.03
CSDE1-209ENST00000525132 FAM92AA1XBS5 289 aa2.34□□□□□ -2.03
CSDE1-209ENST00000525132 ARHGEF33A8MVX0 844 aa2.34□□□□□ -2.03
CSDE1-209ENST00000525132 TRDCB7Z8K6 153 aa2.34□□□□□ -2.03
CSDE1-209ENST00000525132 PANO1I0J062 215 aa2.34□□□□□ -2.03
CSDE1-209ENST00000525132 BUB3O43684 328 aa2.34□□□□□ -2.03
CSDE1-209ENST00000525132 KLRC4O43908 158 aa2.34□□□□□ -2.03
CSDE1-209ENST00000525132 AIREO43918 545 aa2.34□□□□□ -2.03
CSDE1-209ENST00000525132 OR7A10O76100 309 aa2.34□□□□□ -2.03
CSDE1-209ENST00000525132 LYPD3O95274 346 aa2.34□□□□□ -2.03
CSDE1-209ENST00000525132 C1orf105O95561 183 aa2.34□□□□□ -2.03
CSDE1-209ENST00000525132 POP4O95707 220 aaKnown RBP2.34□□□□□ -2.03
CSDE1-209ENST00000525132 UMPSP11172 480 aa2.34□□□□□ -2.03
CSDE1-209ENST00000525132 BCL3P20749 454 aa2.34□□□□□ -2.03
CSDE1-209ENST00000525132 ZNF10P21506 573 aaPredicted RBP2.34□□□□□ -2.03
CSDE1-209ENST00000525132 LCN1P31025 176 aa2.34□□□□□ -2.03
CSDE1-209ENST00000525132 CD80P33681 288 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms