RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-204ENST00000524926 TP63Q9H3D4 680 aaPredicted RBP13.34□□□□□ -0.27
BEST1-204ENST00000524926 RNF122Q9H9V4 155 aa13.34□□□□□ -0.27
BEST1-204ENST00000524926 CSF1P09603 554 aa13.34□□□□□ -0.27
BEST1-204ENST00000524926 CPN1P15169 458 aa13.34□□□□□ -0.27
BEST1-204ENST00000524926 ZNF24P17028 368 aa13.34□□□□□ -0.27
BEST1-204ENST00000524926 FOXG1P55316 489 aaPredicted RBP13.34□□□□□ -0.27
BEST1-204ENST00000524926 QRFPP83859 136 aa13.34□□□□□ -0.27
BEST1-204ENST00000524926 FAPQ12884 760 aa13.34□□□□□ -0.27
BEST1-204ENST00000524926 CBX3Q13185 183 aa13.34□□□□□ -0.27
BEST1-204ENST00000524926 NRN1LQ496H8 165 aa13.34□□□□□ -0.27
BEST1-204ENST00000524926 ZFP69Q49AA0 526 aa13.34□□□□□ -0.27
BEST1-204ENST00000524926 PABPC1L2AQ5JQF8 200 aa13.34□□□□□ -0.27
BEST1-204ENST00000524926 OLFML2AQ68BL7 652 aa13.34□□□□□ -0.27
BEST1-204ENST00000524926 NUFIP2Q7Z417 695 aaKnown RBP13.34□□□□□ -0.27
BEST1-204ENST00000524926 CHST4Q8NCG5 386 aa13.34□□□□□ -0.27
BEST1-204ENST00000524926 OR8S1Q8NH09 359 aa13.34□□□□□ -0.27
BEST1-204ENST00000524926 OR56B4Q8NH76 319 aa13.34□□□□□ -0.27
BEST1-204ENST00000524926 REEP6Q96HR9 211 aa13.34□□□□□ -0.27
BEST1-204ENST00000524926 ACTR6Q9GZN1 396 aa13.34□□□□□ -0.27
BEST1-204ENST00000524926 C20orf85Q9H1P6 137 aa13.34□□□□□ -0.27
BEST1-204ENST00000524926 C12orf49Q9H741 205 aa13.34□□□□□ -0.27
BEST1-204ENST00000524926 BEX1Q9HBH7 125 aa13.34□□□□□ -0.27
BEST1-204ENST00000524926 NEK6Q9HC98 313 aa13.34□□□□□ -0.27
BEST1-204ENST00000524926 ELF5Q9UKW6 265 aaPredicted RBP13.34□□□□□ -0.27
BEST1-204ENST00000524926 FLVCR2Q9UPI3 526 aa13.34□□□□□ -0.27
BEST1-204ENST00000524926 TGM6O95932 706 aa13.33□□□□□ -0.27
BEST1-204ENST00000524926 MMP7P09237 267 aaPredicted RBP13.33□□□□□ -0.27
BEST1-204ENST00000524926 GTF2F2P13984 249 aa13.33□□□□□ -0.27
BEST1-204ENST00000524926 FAUP35544 74 aaKnown RBP13.33□□□□□ -0.27
BEST1-204ENST00000524926 CAMK2BQ13554 666 aa13.33□□□□□ -0.27
BEST1-204ENST00000524926 UBE2V2Q15819 145 aa13.33□□□□□ -0.27
BEST1-204ENST00000524926 KCNJ8Q15842 424 aa13.33□□□□□ -0.27
BEST1-204ENST00000524926 RAB12Q6IQ22 244 aa13.33□□□□□ -0.27
BEST1-204ENST00000524926 CDH26Q8IXH8 852 aa13.33□□□□□ -0.27
BEST1-204ENST00000524926 SEMA6DQ8NFY4 1073 aa13.33□□□□□ -0.27
BEST1-204ENST00000524926 GPX8Q8TED1 209 aa13.33□□□□□ -0.27
BEST1-204ENST00000524926 PP6455Q8WZ26 134 aa13.33□□□□□ -0.27
BEST1-204ENST00000524926 SEH1LQ96EE3 360 aa13.33□□□□□ -0.27
BEST1-204ENST00000524926 OR10A4Q9H209 315 aa13.33□□□□□ -0.27
BEST1-204ENST00000524926 RPL36A-HNRNPH2H7BZ11 118 aa13.33□□□□□ -0.28
BEST1-204ENST00000524926 RTP5Q14D33 572 aa13.33□□□□□ -0.28
BEST1-204ENST00000524926 KISS1Q15726 138 aa13.33□□□□□ -0.28
BEST1-204ENST00000524926 IGFL2Q6UWQ7 119 aa13.33□□□□□ -0.28
BEST1-204ENST00000524926 PNLDC1Q8NA58 520 aaKnown RBP13.33□□□□□ -0.28
BEST1-204ENST00000524926 ZBTB8BQ8NAP8 495 aaPredicted RBP13.33□□□□□ -0.28
BEST1-204ENST00000524926 OR5D18Q8NGL1 313 aa13.33□□□□□ -0.28
BEST1-204ENST00000524926 CMBLQ96DG6 245 aa13.33□□□□□ -0.28
BEST1-204ENST00000524926 TRAV17A0A0B4J275 112 aa13.32□□□□□ -0.28
BEST1-204ENST00000524926 TMEM235A6NFC5 223 aa13.32□□□□□ -0.28
BEST1-204ENST00000524926 SLC22A20A6NK97 555 aa13.32□□□□□ -0.28
BEST1-204ENST00000524926 RAB27BO00194 218 aa13.32□□□□□ -0.28
BEST1-204ENST00000524926 LPLP06858 475 aa13.32□□□□□ -0.28
BEST1-204ENST00000524926 VEGFCP49767 419 aa13.32□□□□□ -0.28
BEST1-204ENST00000524926 PRSS12P56730 875 aa13.32□□□□□ -0.28
BEST1-204ENST00000524926 CPEB3Q8NE35 698 aaKnown RBP13.32□□□□□ -0.28
BEST1-204ENST00000524926 CCDC54Q8NEL0 328 aa13.32□□□□□ -0.28
BEST1-204ENST00000524926 BEST4Q8NFU0 473 aa13.32□□□□□ -0.28
BEST1-204ENST00000524926 GIMAP1Q8WWP7 306 aa13.32□□□□□ -0.28
BEST1-204ENST00000524926 C10orf35Q96D05 121 aa13.32□□□□□ -0.28
BEST1-204ENST00000524926 COL25A1Q9BXS0 654 aaPredicted RBP13.32□□□□□ -0.28
BEST1-204ENST00000524926 CHST5Q9GZS9 411 aa13.32□□□□□ -0.28
BEST1-204ENST00000524926 MED28Q9H204 178 aa13.32□□□□□ -0.28
BEST1-204ENST00000524926 FAM186AA6NE01 2351 aa13.32□□□□□ -0.28
BEST1-204ENST00000524926 TMEM14DPA8MWL7 114 aa13.32□□□□□ -0.28
BEST1-204ENST00000524926 SULT1C2O00338 296 aa13.32□□□□□ -0.28
BEST1-204ENST00000524926 MPIG6BO95866 241 aa13.32□□□□□ -0.28
BEST1-204ENST00000524926 HLA-HP01893 362 aa13.32□□□□□ -0.28
BEST1-204ENST00000524926 RAG2P55895 527 aa13.32□□□□□ -0.28
BEST1-204ENST00000524926 ACTBP60709 375 aa13.32□□□□□ -0.28
BEST1-204ENST00000524926 ACTG1P63261 375 aa13.32□□□□□ -0.28
BEST1-204ENST00000524926 GSG1Q2KHT4 349 aa13.32□□□□□ -0.28
BEST1-204ENST00000524926 KRTAP27-1Q3LI81 207 aa13.32□□□□□ -0.28
BEST1-204ENST00000524926 LINC00303Q3SY05 128 aa13.32□□□□□ -0.28
BEST1-204ENST00000524926 Q6ZTK2 550 aa13.32□□□□□ -0.28
BEST1-204ENST00000524926 ASCL5Q7RTU5 278 aa13.32□□□□□ -0.28
BEST1-204ENST00000524926 OR4D10Q8NGI6 311 aa13.32□□□□□ -0.28
BEST1-204ENST00000524926 OR4C16Q8NGL9 310 aa13.32□□□□□ -0.28
BEST1-204ENST00000524926 DVL3Q92997 716 aaPredicted RBP13.32□□□□□ -0.28
BEST1-204ENST00000524926 GHITMQ9H3K2 345 aa13.32□□□□□ -0.28
BEST1-204ENST00000524926 BANF2Q9H503 90 aa13.32□□□□□ -0.28
BEST1-204ENST00000524926 NOX3Q9HBY0 568 aa13.32□□□□□ -0.28
BEST1-204ENST00000524926 ING3Q9NXR8 418 aa13.32□□□□□ -0.28
BEST1-204ENST00000524926 ZNF224Q9NZL3 707 aa13.32□□□□□ -0.28
BEST1-204ENST00000524926 KCNMB2Q9Y691 235 aa13.32□□□□□ -0.28
BEST1-204ENST00000524926 C7orf66A4D0T2 115 aa13.31□□□□□ -0.28
BEST1-204ENST00000524926 CD3DP04234 171 aa13.31□□□□□ -0.28
BEST1-204ENST00000524926 FCGR2AP12318 317 aa13.31□□□□□ -0.28
BEST1-204ENST00000524926 PRF1P14222 555 aa13.31□□□□□ -0.28
BEST1-204ENST00000524926 CCNOP22674 350 aa13.31□□□□□ -0.28
BEST1-204ENST00000524926 ACKR3P25106 362 aa13.31□□□□□ -0.28
BEST1-204ENST00000524926 RCVRNP35243 200 aa13.31□□□□□ -0.28
BEST1-204ENST00000524926 RIPPLY1Q0D2K3 151 aa13.31□□□□□ -0.28
BEST1-204ENST00000524926 ZNF782Q6ZMW2 699 aaPredicted RBP13.31□□□□□ -0.28
BEST1-204ENST00000524926 Q6ZSR3 168 aa13.31□□□□□ -0.28
BEST1-204ENST00000524926 TMEM104Q8NE00 496 aa13.31□□□□□ -0.28
BEST1-204ENST00000524926 KCNG3Q8TAE7 436 aa13.31□□□□□ -0.28
BEST1-204ENST00000524926 PIGTQ969N2 578 aa13.31□□□□□ -0.28
BEST1-204ENST00000524926 SCPEP1Q9HB40 452 aa13.31□□□□□ -0.28
BEST1-204ENST00000524926 PRSS50Q9UI38 385 aa13.31□□□□□ -0.28
BEST1-204ENST00000524926 ING4Q9UNL4 249 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms