RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 C1orf100Q5SVJ3 147 aa11.68□□□□□ -0.54
CAPN1-202ENST00000524773 NCMAPQ5T1S8 102 aa11.68□□□□□ -0.54
CAPN1-202ENST00000524773 ADAM5Q6NVV9 412 aa11.68□□□□□ -0.54
CAPN1-202ENST00000524773 MISPQ8IVT2 679 aa11.68□□□□□ -0.54
CAPN1-202ENST00000524773 ZDHHC22Q8N966 263 aa11.68□□□□□ -0.54
CAPN1-202ENST00000524773 ASB13Q8WXK3 278 aa11.68□□□□□ -0.54
CAPN1-202ENST00000524773 HIST1H2BAQ96A08 127 aa11.68□□□□□ -0.54
CAPN1-202ENST00000524773 RTBDNQ9BSG5 229 aaPredicted RBP11.68□□□□□ -0.54
CAPN1-202ENST00000524773 TWSG1Q9GZX9 223 aa11.68□□□□□ -0.54
CAPN1-202ENST00000524773 SLC2A8Q9NY64 477 aa11.68□□□□□ -0.54
CAPN1-202ENST00000524773 PRODH2Q9UF12 536 aa11.68□□□□□ -0.54
CAPN1-202ENST00000524773 FLVCR1Q9Y5Y0 555 aa11.68□□□□□ -0.54
CAPN1-202ENST00000524773 CRTAPO75718 401 aaPredicted RBP11.67□□□□□ -0.54
CAPN1-202ENST00000524773 HLA-GP17693 338 aa11.67□□□□□ -0.54
CAPN1-202ENST00000524773 FOXK1P85037 733 aa11.67□□□□□ -0.54
CAPN1-202ENST00000524773 MFAP5Q13361 173 aa11.67□□□□□ -0.54
CAPN1-202ENST00000524773 C1QL2Q7Z5L3 287 aa11.67□□□□□ -0.54
CAPN1-202ENST00000524773 C9orf40Q8IXQ3 194 aa11.67□□□□□ -0.54
CAPN1-202ENST00000524773 OR13G1Q8NGZ3 307 aa11.67□□□□□ -0.54
CAPN1-202ENST00000524773 MRPL38Q96DV4 380 aaKnown RBP11.67□□□□□ -0.54
CAPN1-202ENST00000524773 SLC5A7Q9GZV3 580 aa11.67□□□□□ -0.54
CAPN1-202ENST00000524773 LPAR5Q9H1C0 372 aa11.67□□□□□ -0.54
CAPN1-202ENST00000524773 VSX1Q9NZR4 365 aaPredicted RBP11.67□□□□□ -0.54
CAPN1-202ENST00000524773 RCL1Q9Y2P8 373 aaKnown RBP11.67□□□□□ -0.54
CAPN1-202ENST00000524773 LSM5Q9Y4Y9 91 aaKnown RBP11.67□□□□□ -0.54
CAPN1-202ENST00000524773 TNFP01375 233 aa11.67□□□□□ -0.54
CAPN1-202ENST00000524773 CFPP27918 469 aa11.67□□□□□ -0.54
CAPN1-202ENST00000524773 PLCXD2Q0VAA5 305 aa11.67□□□□□ -0.54
CAPN1-202ENST00000524773 TMEM128Q5BJH2 165 aa11.67□□□□□ -0.54
CAPN1-202ENST00000524773 ZNF704Q6ZNC4 412 aaPredicted RBP11.67□□□□□ -0.54
CAPN1-202ENST00000524773 FAM24BQ8N5W8 94 aa11.67□□□□□ -0.54
CAPN1-202ENST00000524773 PBOV1Q9GZY1 135 aa11.67□□□□□ -0.54
CAPN1-202ENST00000524773 MIOXQ9UGB7 285 aa11.67□□□□□ -0.54
CAPN1-202ENST00000524773 IGKV1D-8A0A087WSZ0 117 aa11.67□□□□□ -0.54
CAPN1-202ENST00000524773 FSTP19883 344 aa11.67□□□□□ -0.54
CAPN1-202ENST00000524773 HGFACQ04756 655 aa11.67□□□□□ -0.54
CAPN1-202ENST00000524773 ZNF616Q08AN1 781 aa11.67□□□□□ -0.54
CAPN1-202ENST00000524773 SP6Q3SY56 376 aa11.67□□□□□ -0.54
CAPN1-202ENST00000524773 ABHD12BQ7Z5M8 362 aaPredicted RBP11.67□□□□□ -0.54
CAPN1-202ENST00000524773 OR10S1Q8NGN2 331 aa11.67□□□□□ -0.54
CAPN1-202ENST00000524773 ADAMTS17Q8TE56 1095 aa11.67□□□□□ -0.54
CAPN1-202ENST00000524773 C11orf40Q8WZ69 217 aa11.67□□□□□ -0.54
CAPN1-202ENST00000524773 RAB3CQ96E17 227 aa11.67□□□□□ -0.54
CAPN1-202ENST00000524773 LIN37Q96GY3 246 aaPredicted RBP11.67□□□□□ -0.54
CAPN1-202ENST00000524773 KIRREL1Q96J84 757 aa11.67□□□□□ -0.54
CAPN1-202ENST00000524773 GPER1Q99527 375 aa11.67□□□□□ -0.54
CAPN1-202ENST00000524773 HDHD3Q9BSH5 251 aaPredicted RBP11.67□□□□□ -0.54
CAPN1-202ENST00000524773 RAB33BQ9H082 229 aa11.67□□□□□ -0.54
CAPN1-202ENST00000524773 UNC13CQ8NB66 2214 aa11.67□□□□□ -0.54
CAPN1-202ENST00000524773 PMS2P1A4D2B8 440 aa11.66□□□□□ -0.54
CAPN1-202ENST00000524773 TTLL8A6PVC2 850 aa11.66□□□□□ -0.54
CAPN1-202ENST00000524773 ATXN7O15265 892 aaPredicted RBP11.66□□□□□ -0.54
CAPN1-202ENST00000524773 HCKP08631 526 aa11.66□□□□□ -0.54
CAPN1-202ENST00000524773 AMY2BP19961 511 aa11.66□□□□□ -0.54
CAPN1-202ENST00000524773 RAB5BP61020 215 aa11.66□□□□□ -0.54
CAPN1-202ENST00000524773 IGLV3-21P80748 117 aaPredicted RBP11.66□□□□□ -0.54
CAPN1-202ENST00000524773 LINC00469Q8N7U9 141 aa11.66□□□□□ -0.54
CAPN1-202ENST00000524773 RLN3Q8WXF3 142 aa11.66□□□□□ -0.54
CAPN1-202ENST00000524773 FAM131CQ96AQ9 280 aa11.66□□□□□ -0.54
CAPN1-202ENST00000524773 SLAMF6Q96DU3 332 aa11.66□□□□□ -0.54
CAPN1-202ENST00000524773 NMES1Q9C002 83 aa11.66□□□□□ -0.54
CAPN1-202ENST00000524773 ZNF304Q9HCX3 659 aa11.66□□□□□ -0.54
CAPN1-202ENST00000524773 ZNF581Q9P0T4 197 aa11.66□□□□□ -0.54
CAPN1-202ENST00000524773 GPR132Q9UNW8 380 aa11.66□□□□□ -0.54
CAPN1-202ENST00000524773 A0A1W2PPE2 198 aa11.66□□□□□ -0.54
CAPN1-202ENST00000524773 MEGF11A6BM72 1044 aa11.66□□□□□ -0.54
CAPN1-202ENST00000524773 FAM221BA6H8Z2 402 aa11.66□□□□□ -0.54
CAPN1-202ENST00000524773 NPIPA5E9PKD4 350 aa11.66□□□□□ -0.54
CAPN1-202ENST00000524773 MS4A18H0YCH9 400 aa11.66□□□□□ -0.54
CAPN1-202ENST00000524773 MYF5P13349 255 aa11.66□□□□□ -0.54
CAPN1-202ENST00000524773 ZNF14P17017 642 aaPredicted RBP11.66□□□□□ -0.54
CAPN1-202ENST00000524773 PTAFRP25105 342 aa11.66□□□□□ -0.54
CAPN1-202ENST00000524773 P2RY4P51582 365 aa11.66□□□□□ -0.54
CAPN1-202ENST00000524773 CEBPGP53567 150 aa11.66□□□□□ -0.54
CAPN1-202ENST00000524773 HYAL1Q12794 435 aa11.66□□□□□ -0.54
CAPN1-202ENST00000524773 CLINT1Q14677 625 aa11.66□□□□□ -0.54
CAPN1-202ENST00000524773 MS4A18Q3C1V0 323 aa11.66□□□□□ -0.54
CAPN1-202ENST00000524773 AWAT1Q58HT5 328 aa11.66□□□□□ -0.54
CAPN1-202ENST00000524773 ACER2Q5QJU3 275 aa11.66□□□□□ -0.54
CAPN1-202ENST00000524773 CDPF1Q6NVV7 123 aa11.66□□□□□ -0.54
CAPN1-202ENST00000524773 PRSS54Q6PEW0 395 aa11.66□□□□□ -0.54
CAPN1-202ENST00000524773 LANCL3Q6ZV70 420 aa11.66□□□□□ -0.54
CAPN1-202ENST00000524773 DMBX1Q8NFW5 382 aa11.66□□□□□ -0.54
CAPN1-202ENST00000524773 ERGIC1Q969X5 290 aa11.66□□□□□ -0.54
CAPN1-202ENST00000524773 ADIPOR1Q96A54 375 aa11.66□□□□□ -0.54
CAPN1-202ENST00000524773 REEP6Q96HR9 211 aa11.66□□□□□ -0.54
CAPN1-202ENST00000524773 C5orf34Q96MH7 638 aa11.66□□□□□ -0.54
CAPN1-202ENST00000524773 ELL3Q9HB65 397 aaPredicted RBP11.66□□□□□ -0.54
CAPN1-202ENST00000524773 EHFQ9NZC4 300 aa11.66□□□□□ -0.54
CAPN1-202ENST00000524773 NPIPA1Q9UND3 350 aa11.66□□□□□ -0.54
CAPN1-202ENST00000524773 MRPS28Q9Y2Q9 187 aaKnown RBP11.66□□□□□ -0.54
CAPN1-202ENST00000524773 LOC390937A0A1W2PQ73 354 aa11.65□□□□□ -0.54
CAPN1-202ENST00000524773 TCRBV21S2A2A0A5A6 115 aa11.65□□□□□ -0.54
CAPN1-202ENST00000524773 C1orf196B1AJZ1 125 aa11.65□□□□□ -0.54
CAPN1-202ENST00000524773 E9PLN8 166 aa11.65□□□□□ -0.54
CAPN1-202ENST00000524773 XRCC2O43543 280 aa11.65□□□□□ -0.54
CAPN1-202ENST00000524773 SFT2D2O95562 160 aa11.65□□□□□ -0.54
CAPN1-202ENST00000524773 CSTBP04080 98 aaKnown RBP11.65□□□□□ -0.54
CAPN1-202ENST00000524773 ITGA3P26006 1051 aa11.65□□□□□ -0.54
CAPN1-202ENST00000524773 SLC26A5P58743 744 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms