RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 RTL6Q6ICC9 239 aa8.7□□□□□ -1.02
VPS13B-212ENST00000524330 TFAP2EQ6VUC0 442 aa8.7□□□□□ -1.02
VPS13B-212ENST00000524330 BEND4Q6ZU67 534 aa8.7□□□□□ -1.02
VPS13B-212ENST00000524330 NRARPQ7Z6K4 114 aa8.7□□□□□ -1.02
VPS13B-212ENST00000524330 ANGPTL5Q86XS5 388 aa8.7□□□□□ -1.02
VPS13B-212ENST00000524330 C1orf174Q8IYL3 243 aa8.7□□□□□ -1.02
VPS13B-212ENST00000524330 C17orf78Q8N4C9 275 aa8.7□□□□□ -1.02
VPS13B-212ENST00000524330 RBMXL3Q8N7X1 1067 aaKnown RBP8.7□□□□□ -1.02
VPS13B-212ENST00000524330 DUSP18Q8NEJ0 188 aa8.7□□□□□ -1.02
VPS13B-212ENST00000524330 OR52N4Q8NGI2 321 aa8.7□□□□□ -1.02
VPS13B-212ENST00000524330 OR51A2Q8NGJ7 313 aa8.7□□□□□ -1.02
VPS13B-212ENST00000524330 OR5M9Q8NGP3 310 aa8.7□□□□□ -1.02
VPS13B-212ENST00000524330 BCL2L2Q92843 193 aaPredicted RBP8.7□□□□□ -1.02
VPS13B-212ENST00000524330 SLC25A28Q96A46 364 aa8.7□□□□□ -1.02
VPS13B-212ENST00000524330 BORCS8Q96FH0 119 aa8.7□□□□□ -1.02
VPS13B-212ENST00000524330 HIST1H2AAQ96QV6 131 aa8.7□□□□□ -1.02
VPS13B-212ENST00000524330 ABHD1Q96SE0 405 aa8.7□□□□□ -1.02
VPS13B-212ENST00000524330 ACTR6Q9GZN1 396 aa8.7□□□□□ -1.02
VPS13B-212ENST00000524330 C11orf54Q9H0W9 315 aaPredicted RBP8.7□□□□□ -1.02
VPS13B-212ENST00000524330 CNTD2Q9H8S5 307 aa8.7□□□□□ -1.02
VPS13B-212ENST00000524330 CDH20Q9HBT6 801 aa8.7□□□□□ -1.02
VPS13B-212ENST00000524330 TUBG2Q9NRH3 451 aa8.7□□□□□ -1.02
VPS13B-212ENST00000524330 TUBD1Q9UJT1 453 aa8.7□□□□□ -1.02
VPS13B-212ENST00000524330 TRAV18A0A075B6X5 111 aa8.69□□□□□ -1.02
VPS13B-212ENST00000524330 C5orf49A4QMS7 147 aa8.69□□□□□ -1.02
VPS13B-212ENST00000524330 MBD3L4A6NDZ8 208 aaPredicted RBP8.69□□□□□ -1.02
VPS13B-212ENST00000524330 MBD3L3A6NE82 208 aaPredicted RBP8.69□□□□□ -1.02
VPS13B-212ENST00000524330 MBD3L5A6NJ08 208 aaPredicted RBP8.69□□□□□ -1.02
VPS13B-212ENST00000524330 H3BUI4 141 aa8.69□□□□□ -1.02
VPS13B-212ENST00000524330 KDM4BO94953 1096 aa8.69□□□□□ -1.02
VPS13B-212ENST00000524330 NRASP01111 189 aa8.69□□□□□ -1.02
VPS13B-212ENST00000524330 HLA-HP01893 362 aa8.69□□□□□ -1.02
VPS13B-212ENST00000524330 HNRNPCP07910 306 aaKnown RBP eCLIP8.69□□□□□ -1.02
VPS13B-212ENST00000524330 PATE4P0C8F1 98 aa8.69□□□□□ -1.02
VPS13B-212ENST00000524330 TMIGD3P0DMS9 266 aaPredicted RBP8.69□□□□□ -1.02
VPS13B-212ENST00000524330 SELEP16581 610 aa8.69□□□□□ -1.02
VPS13B-212ENST00000524330 CCNOP22674 350 aa8.69□□□□□ -1.02
VPS13B-212ENST00000524330 RCVRNP35243 200 aa8.69□□□□□ -1.02
VPS13B-212ENST00000524330 GDNFP39905 211 aa8.69□□□□□ -1.02
VPS13B-212ENST00000524330 FUT6P51993 359 aa8.69□□□□□ -1.02
VPS13B-212ENST00000524330 PMPCAQ10713 525 aa8.69□□□□□ -1.02
VPS13B-212ENST00000524330 SNTB2Q13425 540 aaKnown RBP8.69□□□□□ -1.02
VPS13B-212ENST00000524330 PLEKHN1Q494U1 663 aaPredicted RBP8.69□□□□□ -1.02
VPS13B-212ENST00000524330 SFRP5Q5T4F7 317 aa8.69□□□□□ -1.02
VPS13B-212ENST00000524330 GLIPR1L1Q6UWM5 242 aa8.69□□□□□ -1.02
VPS13B-212ENST00000524330 OR56B1Q8NGI3 324 aa8.69□□□□□ -1.02
VPS13B-212ENST00000524330 MBD3L2Q8NHZ7 208 aaPredicted RBP8.69□□□□□ -1.02
VPS13B-212ENST00000524330 SLC7A6Q92536 515 aa8.69□□□□□ -1.02
VPS13B-212ENST00000524330 YIPF5Q969M3 257 aa8.69□□□□□ -1.02
VPS13B-212ENST00000524330 PIGTQ969N2 578 aa8.69□□□□□ -1.02
VPS13B-212ENST00000524330 SPSB4Q96A44 273 aa8.69□□□□□ -1.02
VPS13B-212ENST00000524330 CREB3L1Q96BA8 519 aa8.69□□□□□ -1.02
VPS13B-212ENST00000524330 ABHD17AQ96GS6 310 aa8.69□□□□□ -1.02
VPS13B-212ENST00000524330 TAAR6Q96RI8 345 aa8.69□□□□□ -1.02
VPS13B-212ENST00000524330 USB1Q9BQ65 265 aaKnown RBP8.69□□□□□ -1.02
VPS13B-212ENST00000524330 METTL9Q9H1A3 318 aa8.69□□□□□ -1.02
VPS13B-212ENST00000524330 TP63Q9H3D4 680 aaPredicted RBP8.69□□□□□ -1.02
VPS13B-212ENST00000524330 PLSCR4Q9NRQ2 329 aa8.69□□□□□ -1.02
VPS13B-212ENST00000524330 ZNF319Q9P2F9 582 aa8.69□□□□□ -1.02
VPS13B-212ENST00000524330 ZNF107Q9UII5 783 aaPredicted RBP8.69□□□□□ -1.02
VPS13B-212ENST00000524330 ING4Q9UNL4 249 aa8.69□□□□□ -1.02
VPS13B-212ENST00000524330 LHX6Q9UPM6 363 aa8.69□□□□□ -1.02
VPS13B-212ENST00000524330 AMDHD2Q9Y303 409 aa8.69□□□□□ -1.02
VPS13B-212ENST00000524330 NOP16Q9Y3C1 178 aaKnown RBP8.69□□□□□ -1.02
VPS13B-212ENST00000524330 NUBP2Q9Y5Y2 271 aa8.69□□□□□ -1.02
VPS13B-212ENST00000524330 RIF1Q5UIP0 2472 aaKnown RBP8.69□□□□□ -1.02
VPS13B-212ENST00000524330 USP34Q70CQ2 3546 aa8.68□□□□□ -1.02
VPS13B-212ENST00000524330 A6NIN4 97 aa8.68□□□□□ -1.02
VPS13B-212ENST00000524330 LMX1BO60663 402 aa8.68□□□□□ -1.02
VPS13B-212ENST00000524330 CYB5AP00167 134 aa8.68□□□□□ -1.02
VPS13B-212ENST00000524330 CSTBP04080 98 aaKnown RBP8.68□□□□□ -1.02
VPS13B-212ENST00000524330 CD3GP09693 182 aa8.68□□□□□ -1.02
VPS13B-212ENST00000524330 FAHP16930 419 aa8.68□□□□□ -1.02
VPS13B-212ENST00000524330 TIMP3P35625 211 aa8.68□□□□□ -1.02
VPS13B-212ENST00000524330 ALDH3B1P43353 468 aa8.68□□□□□ -1.02
VPS13B-212ENST00000524330 RBP2P50120 134 aa8.68□□□□□ -1.02
VPS13B-212ENST00000524330 RAB25P57735 213 aa8.68□□□□□ -1.02
VPS13B-212ENST00000524330 BTG1P62324 171 aa8.68□□□□□ -1.02
VPS13B-212ENST00000524330 DGCR2P98153 550 aa8.68□□□□□ -1.02
VPS13B-212ENST00000524330 GUSBP1Q15486 140 aa8.68□□□□□ -1.02
VPS13B-212ENST00000524330 KISS1Q15726 138 aa8.68□□□□□ -1.02
VPS13B-212ENST00000524330 RSPO1Q2MKA7 263 aaPredicted RBP8.68□□□□□ -1.02
VPS13B-212ENST00000524330 SNAI3Q3KNW1 292 aa8.68□□□□□ -1.02
VPS13B-212ENST00000524330 COLCA1Q6ZS62 124 aa8.68□□□□□ -1.02
VPS13B-212ENST00000524330 SSX8Q7RTT4 187 aa8.68□□□□□ -1.02
VPS13B-212ENST00000524330 NAA40Q86UY6 237 aa8.68□□□□□ -1.02
VPS13B-212ENST00000524330 IZUMO1Q8IYV9 350 aa8.68□□□□□ -1.02
VPS13B-212ENST00000524330 OR5AS1Q8N127 324 aa8.68□□□□□ -1.02
VPS13B-212ENST00000524330 GABRG1Q8N1C3 465 aa8.68□□□□□ -1.02
VPS13B-212ENST00000524330 CHST4Q8NCG5 386 aa8.68□□□□□ -1.02
VPS13B-212ENST00000524330 SLC30A7Q8NEW0 376 aa8.68□□□□□ -1.02
VPS13B-212ENST00000524330 FAM57AQ8TBR7 257 aa8.68□□□□□ -1.02
VPS13B-212ENST00000524330 TNFAIP8L1Q8WVP5 186 aa8.68□□□□□ -1.02
VPS13B-212ENST00000524330 TRIM63Q969Q1 353 aa8.68□□□□□ -1.02
VPS13B-212ENST00000524330 POM121Q96HA1 1249 aa8.68□□□□□ -1.02
VPS13B-212ENST00000524330 BOD1Q96IK1 185 aa8.68□□□□□ -1.02
VPS13B-212ENST00000524330 LYZL4Q96KX0 146 aa8.68□□□□□ -1.02
VPS13B-212ENST00000524330 SFXN3Q9BWM7 321 aa8.68□□□□□ -1.02
VPS13B-212ENST00000524330 TMEM59Q9BXS4 323 aa8.68□□□□□ -1.02
VPS13B-212ENST00000524330 TP53TG5Q9Y2B4 290 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms