RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 NRF1Q16656 503 aa3.19□□□□□ -1.9
SKP1-209ENST00000522552 MICAQ29983 383 aa3.19□□□□□ -1.9
SKP1-209ENST00000522552 PXDC1Q5TGL8 231 aa3.19□□□□□ -1.9
SKP1-209ENST00000522552 MORN5Q5VZ52 161 aa3.19□□□□□ -1.9
SKP1-209ENST00000522552 CRIP3Q6Q6R5 217 aa3.19□□□□□ -1.9
SKP1-209ENST00000522552 REG3GQ6UW15 175 aa3.19□□□□□ -1.9
SKP1-209ENST00000522552 SLC34A3Q8N130 599 aa3.19□□□□□ -1.9
SKP1-209ENST00000522552 GAPTQ8N292 157 aa3.19□□□□□ -1.9
SKP1-209ENST00000522552 OR10Z1Q8NGY1 313 aa3.19□□□□□ -1.9
SKP1-209ENST00000522552 CASTOR1Q8WTX7 329 aa3.19□□□□□ -1.9
SKP1-209ENST00000522552 TAF15Q92804 592 aaKnown RBP eCLIP3.19□□□□□ -1.9
SKP1-209ENST00000522552 ANKRD9Q96BM1 317 aaPredicted RBP3.19□□□□□ -1.9
SKP1-209ENST00000522552 ZBTB9Q96C00 473 aa3.19□□□□□ -1.9
SKP1-209ENST00000522552 PSMB7Q99436 277 aa3.19□□□□□ -1.9
SKP1-209ENST00000522552 SDHCQ99643 169 aaPredicted RBP3.19□□□□□ -1.9
SKP1-209ENST00000522552 CLEC7AQ9BXN2 247 aa3.19□□□□□ -1.9
SKP1-209ENST00000522552 SELENOIQ9C0D9 397 aa3.19□□□□□ -1.9
SKP1-209ENST00000522552 RPF2Q9H7B2 306 aaKnown RBP3.19□□□□□ -1.9
SKP1-209ENST00000522552 UGT1A7Q9HAW7 530 aa3.19□□□□□ -1.9
SKP1-209ENST00000522552 AMBNQ9NP70 447 aa3.19□□□□□ -1.9
SKP1-209ENST00000522552 THAP10Q9P2Z0 257 aaPredicted RBP3.19□□□□□ -1.9
SKP1-209ENST00000522552 VSIG4Q9Y279 399 aa3.19□□□□□ -1.9
SKP1-209ENST00000522552 FARSAQ9Y285 508 aaKnown RBP3.19□□□□□ -1.9
SKP1-209ENST00000522552 TP53TG1Q9Y2A0 90 aa3.19□□□□□ -1.9
SKP1-209ENST00000522552 ARL2BPQ9Y2Y0 163 aa3.19□□□□□ -1.9
SKP1-209ENST00000522552 ALG5Q9Y673 324 aa3.19□□□□□ -1.9
SKP1-209ENST00000522552 PBRM1Q86U86 1689 aa3.19□□□□□ -1.9
SKP1-209ENST00000522552 PEG3Q9GZU2 1588 aa3.19□□□□□ -1.9
SKP1-209ENST00000522552 FLT4P35916 1363 aa3.18□□□□□ -1.9
SKP1-209ENST00000522552 EIF3AQ14152 1382 aaKnown RBP3.18□□□□□ -1.9
SKP1-209ENST00000522552 FAM220BPB1ANY3 271 aa3.18□□□□□ -1.9
SKP1-209ENST00000522552 SMIM1B2RUZ4 78 aa3.18□□□□□ -1.9
SKP1-209ENST00000522552 C12orf77C9JDV5 145 aa3.18□□□□□ -1.9
SKP1-209ENST00000522552 FADS1O60427 444 aa3.18□□□□□ -1.9
SKP1-209ENST00000522552 SLC22A5O76082 557 aa3.18□□□□□ -1.9
SKP1-209ENST00000522552 KLF8O95600 359 aaPredicted RBP3.18□□□□□ -1.9
SKP1-209ENST00000522552 KRT75O95678 551 aa3.18□□□□□ -1.9
SKP1-209ENST00000522552 SEMA4FO95754 770 aa3.18□□□□□ -1.9
SKP1-209ENST00000522552 PFN2P35080 140 aa3.18□□□□□ -1.9
SKP1-209ENST00000522552 TIMP3P35625 211 aa3.18□□□□□ -1.9
SKP1-209ENST00000522552 CEACAM6P40199 344 aa3.18□□□□□ -1.9
SKP1-209ENST00000522552 NR4A2P43354 598 aa3.18□□□□□ -1.9
SKP1-209ENST00000522552 MAGEA12P43365 314 aa3.18□□□□□ -1.9
SKP1-209ENST00000522552 ZNF266Q14584 549 aa3.18□□□□□ -1.9
SKP1-209ENST00000522552 SIX1Q15475 284 aaPredicted RBP3.18□□□□□ -1.9
SKP1-209ENST00000522552 HLA-DRB5Q30154 266 aa3.18□□□□□ -1.9
SKP1-209ENST00000522552 YIF1BQ5BJH7 314 aa3.18□□□□□ -1.9
SKP1-209ENST00000522552 MARC1Q5VT66 337 aa3.18□□□□□ -1.9
SKP1-209ENST00000522552 CST9Q5W186 159 aa3.18□□□□□ -1.9
SKP1-209ENST00000522552 ZNF324BQ6AW86 544 aaPredicted RBP3.18□□□□□ -1.9
SKP1-209ENST00000522552 C11orf71Q6IPW1 123 aa3.18□□□□□ -1.9
SKP1-209ENST00000522552 FAM92BQ6ZTR7 304 aa3.18□□□□□ -1.9
SKP1-209ENST00000522552 FAM19A5Q7Z5A7 132 aaPredicted RBP3.18□□□□□ -1.9
SKP1-209ENST00000522552 C17orf82Q86X59 251 aaPredicted RBP3.18□□□□□ -1.9
SKP1-209ENST00000522552 SLC30A8Q8IWU4 369 aa3.18□□□□□ -1.9
SKP1-209ENST00000522552 SKA3Q8IX90 412 aa3.18□□□□□ -1.9
SKP1-209ENST00000522552 CBR4Q8N4T8 237 aa3.18□□□□□ -1.9
SKP1-209ENST00000522552 PXT1Q8NFP0 134 aa3.18□□□□□ -1.9
SKP1-209ENST00000522552 BEST4Q8NFU0 473 aa3.18□□□□□ -1.9
SKP1-209ENST00000522552 ZNF519Q8TB69 540 aa3.18□□□□□ -1.9
SKP1-209ENST00000522552 ACTRT1Q8TDG2 376 aa3.18□□□□□ -1.9
SKP1-209ENST00000522552 HAVCR2Q8TDQ0 301 aa3.18□□□□□ -1.9
SKP1-209ENST00000522552 SDR42E1Q8WUS8 393 aa3.18□□□□□ -1.9
SKP1-209ENST00000522552 PYDC1Q8WXC3 89 aa3.18□□□□□ -1.9
SKP1-209ENST00000522552 P2RX4Q99571 388 aa3.18□□□□□ -1.9
SKP1-209ENST00000522552 NIPSNAP1Q9BPW8 284 aa3.18□□□□□ -1.9
SKP1-209ENST00000522552 MAP1LC3AQ9H492 121 aa3.18□□□□□ -1.9
SKP1-209ENST00000522552 ASB7Q9H672 318 aa3.18□□□□□ -1.9
SKP1-209ENST00000522552 UGT1A8Q9HAW9 530 aa3.18□□□□□ -1.9
SKP1-209ENST00000522552 INIPQ9NRY2 104 aa3.18□□□□□ -1.9
SKP1-209ENST00000522552 C19orf12Q9NSK7 152 aa3.18□□□□□ -1.9
SKP1-209ENST00000522552 TREM2Q9NZC2 230 aa3.18□□□□□ -1.9
SKP1-209ENST00000522552 TMEM9Q9P0T7 183 aa3.18□□□□□ -1.9
SKP1-209ENST00000522552 ZNF257Q9Y2Q1 563 aa3.18□□□□□ -1.9
SKP1-209ENST00000522552 ARL5AQ9Y689 179 aa3.18□□□□□ -1.9
SKP1-209ENST00000522552 ADAMTSL3P82987 1691 aa3.18□□□□□ -1.9
SKP1-209ENST00000522552 C2orf16Q68DN1 1984 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 IGLV1-36A0A0B4J1U3 117 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 CEACAM18A8MTB9 384 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 C2orf74A8MZ97 194 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 E9PAM4 449 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 KPNA3O00505 521 aaPredicted RBP3.17□□□□□ -1.9
SKP1-209ENST00000522552 HCRTR1O43613 425 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 CRLF1O75462 422 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 GATBO75879 557 aaKnown RBP3.17□□□□□ -1.9
SKP1-209ENST00000522552 DCTN3O75935 186 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 PCCAP05165 728 aaPredicted RBP3.17□□□□□ -1.9
SKP1-209ENST00000522552 MELTFP08582 738 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 UCHL3P15374 230 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 IGLL1P15814 213 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 ATF6P18850 670 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 ANOS1P23352 680 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 GDF1P27539 372 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 ALDH3A1P30838 453 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 CCKARP32238 428 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 RIDAP52758 137 aaKnown RBP3.17□□□□□ -1.9
SKP1-209ENST00000522552 TMEM33P57088 247 aa3.17□□□□□ -1.9
SKP1-209ENST00000522552 RPL32P62910 135 aaKnown RBP3.17□□□□□ -1.9
SKP1-209ENST00000522552 CYCSP99999 105 aaKnown RBP3.17□□□□□ -1.9
SKP1-209ENST00000522552 IL5RAQ01344 420 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms