RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 SPTSSAQ969W0 71 aa12.53□□□□□ -0.4
TRAPPC9-213ENST00000522504 DDOQ99489 341 aa12.53□□□□□ -0.4
TRAPPC9-213ENST00000522504 TRIM36Q9NQ86 728 aa12.53□□□□□ -0.4
TRAPPC9-213ENST00000522504 SIGLEC9Q9Y336 463 aa12.53□□□□□ -0.4
TRAPPC9-213ENST00000522504 A0A1B0GVI7 797 aa12.52□□□□□ -0.41
TRAPPC9-213ENST00000522504 SELLP14151 372 aa12.52□□□□□ -0.41
TRAPPC9-213ENST00000522504 CSNK2BP67870 215 aa12.52□□□□□ -0.41
TRAPPC9-213ENST00000522504 C11orf91Q3C1V1 193 aa12.52□□□□□ -0.41
TRAPPC9-213ENST00000522504 SLC35E4Q6ICL7 350 aa12.52□□□□□ -0.41
TRAPPC9-213ENST00000522504 CYB561A3Q8NBI2 242 aa12.52□□□□□ -0.41
TRAPPC9-213ENST00000522504 PPP1R35Q8TAP8 253 aa12.52□□□□□ -0.41
TRAPPC9-213ENST00000522504 TNFRSF14Q92956 283 aa12.52□□□□□ -0.41
TRAPPC9-213ENST00000522504 HOPXQ9BPY8 73 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC9-213ENST00000522504 KCTD14Q9BQ13 255 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC9-213ENST00000522504 NSRP1Q9H0G5 558 aaKnown RBP12.52□□□□□ -0.41
TRAPPC9-213ENST00000522504 N6AMT1Q9Y5N5 214 aa12.52□□□□□ -0.41
TRAPPC9-213ENST00000522504 NOTCH3Q9UM47 2321 aa12.52□□□□□ -0.41
TRAPPC9-213ENST00000522504 BHLHE40O14503 412 aa12.51□□□□□ -0.41
TRAPPC9-213ENST00000522504 ACOT8O14734 319 aa12.51□□□□□ -0.41
TRAPPC9-213ENST00000522504 NPFFO15130 113 aa12.51□□□□□ -0.41
TRAPPC9-213ENST00000522504 SLC22A2O15244 555 aa12.51□□□□□ -0.41
TRAPPC9-213ENST00000522504 TFF1P04155 84 aa12.51□□□□□ -0.41
TRAPPC9-213ENST00000522504 FBP1P09467 338 aa12.51□□□□□ -0.41
TRAPPC9-213ENST00000522504 CSF1P09603 554 aa12.51□□□□□ -0.41
TRAPPC9-213ENST00000522504 PRKXP51817 358 aa12.51□□□□□ -0.41
TRAPPC9-213ENST00000522504 GYS2P54840 703 aa12.51□□□□□ -0.41
TRAPPC9-213ENST00000522504 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.51□□□□□ -0.41
TRAPPC9-213ENST00000522504 METAP1DQ6UB28 335 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC9-213ENST00000522504 DRAM2Q6UX65 266 aa12.51□□□□□ -0.41
TRAPPC9-213ENST00000522504 Q6ZPA2 131 aa12.51□□□□□ -0.41
TRAPPC9-213ENST00000522504 SPERTQ8NA61 448 aa12.51□□□□□ -0.41
TRAPPC9-213ENST00000522504 OR51L1Q8NGJ5 315 aa12.51□□□□□ -0.41
TRAPPC9-213ENST00000522504 LRRC29Q8WV35 223 aa12.51□□□□□ -0.41
TRAPPC9-213ENST00000522504 LRTOMTQ8WZ04 291 aa12.51□□□□□ -0.41
TRAPPC9-213ENST00000522504 DCAF13Q9NV06 445 aaKnown RBP12.51□□□□□ -0.41
TRAPPC9-213ENST00000522504 ABCD2Q9UBJ2 740 aa12.51□□□□□ -0.41
TRAPPC9-213ENST00000522504 KCNG2Q9UJ96 466 aa12.51□□□□□ -0.41
TRAPPC9-213ENST00000522504 V9GYQ6 96 aa12.51□□□□□ -0.41
TRAPPC9-213ENST00000522504 SEMG1P04279 462 aa12.5□□□□□ -0.41
TRAPPC9-213ENST00000522504 ZNF823P16415 610 aa12.5□□□□□ -0.41
TRAPPC9-213ENST00000522504 NOS3P29474 1203 aa12.5□□□□□ -0.41
TRAPPC9-213ENST00000522504 GSSP48637 474 aa12.5□□□□□ -0.41
TRAPPC9-213ENST00000522504 IKZF1Q13422 519 aa12.5□□□□□ -0.41
TRAPPC9-213ENST00000522504 MICBQ29980 383 aa12.5□□□□□ -0.41
TRAPPC9-213ENST00000522504 KPRPQ5T749 579 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC9-213ENST00000522504 GLYATQ6IB77 296 aa12.5□□□□□ -0.41
TRAPPC9-213ENST00000522504 WDR82Q6UXN9 313 aa12.5□□□□□ -0.41
TRAPPC9-213ENST00000522504 DCXRQ7Z4W1 244 aa12.5□□□□□ -0.41
TRAPPC9-213ENST00000522504 OR1M1Q8NGA1 313 aa12.5□□□□□ -0.41
TRAPPC9-213ENST00000522504 OR5T2Q8NGG2 359 aa12.5□□□□□ -0.41
TRAPPC9-213ENST00000522504 C17orf50Q8WW18 174 aa12.5□□□□□ -0.41
TRAPPC9-213ENST00000522504 SPSB4Q96A44 273 aa12.5□□□□□ -0.41
TRAPPC9-213ENST00000522504 COPS4Q9BT78 406 aa12.5□□□□□ -0.41
TRAPPC9-213ENST00000522504 PPA2Q9H2U2 334 aa12.5□□□□□ -0.41
TRAPPC9-213ENST00000522504 EGLN3Q9H6Z9 239 aa12.5□□□□□ -0.41
TRAPPC9-213ENST00000522504 KRCC1Q9NPI7 259 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC9-213ENST00000522504 C14orf119Q9NWQ9 140 aa12.5□□□□□ -0.41
TRAPPC9-213ENST00000522504 ZNF281Q9Y2X9 895 aa12.5□□□□□ -0.41
TRAPPC9-213ENST00000522504 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC9-213ENST00000522504 IDH3BO43837 385 aa12.49□□□□□ -0.41
TRAPPC9-213ENST00000522504 MUC1P15941 1255 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC9-213ENST00000522504 SAA4P35542 130 aa12.49□□□□□ -0.41
TRAPPC9-213ENST00000522504 TGFBR2P37173 567 aa12.49□□□□□ -0.41
TRAPPC9-213ENST00000522504 TGM4P49221 684 aa12.49□□□□□ -0.41
TRAPPC9-213ENST00000522504 NUDT2P50583 147 aa12.49□□□□□ -0.41
TRAPPC9-213ENST00000522504 FAM3AP98173 230 aa12.49□□□□□ -0.41
TRAPPC9-213ENST00000522504 SPIBQ01892 262 aa12.49□□□□□ -0.41
TRAPPC9-213ENST00000522504 SAMD5Q5TGI4 173 aa12.49□□□□□ -0.41
TRAPPC9-213ENST00000522504 C11orf44Q8N8P7 122 aa12.49□□□□□ -0.41
TRAPPC9-213ENST00000522504 PROKR2Q8NFJ6 384 aa12.49□□□□□ -0.41
TRAPPC9-213ENST00000522504 NPRL2Q8WTW4 380 aa12.49□□□□□ -0.41
TRAPPC9-213ENST00000522504 AJUBAQ96IF1 538 aa12.49□□□□□ -0.41
TRAPPC9-213ENST00000522504 DCTN5Q9BTE1 182 aa12.49□□□□□ -0.41
TRAPPC9-213ENST00000522504 WDR13Q9H1Z4 485 aa12.49□□□□□ -0.41
TRAPPC9-213ENST00000522504 RNPEPL1Q9HAU8 725 aa12.49□□□□□ -0.41
TRAPPC9-213ENST00000522504 PRPF19Q9UMS4 504 aaKnown RBP12.49□□□□□ -0.41
TRAPPC9-213ENST00000522504 FOXJ3Q9UPW0 622 aa12.49□□□□□ -0.41
TRAPPC9-213ENST00000522504 COMMD3-BMI1R4GMX3 469 aa12.49□□□□□ -0.41
TRAPPC9-213ENST00000522504 DNAH9Q9NYC9 4486 aa12.49□□□□□ -0.41
TRAPPC9-213ENST00000522504 MEIOCA2RUB1 952 aa12.48□□□□□ -0.41
TRAPPC9-213ENST00000522504 MEGF11A6BM72 1044 aa12.48□□□□□ -0.41
TRAPPC9-213ENST00000522504 CDIPTO14735 213 aa12.48□□□□□ -0.41
TRAPPC9-213ENST00000522504 GADD45GO95257 159 aa12.48□□□□□ -0.41
TRAPPC9-213ENST00000522504 OPN1MWP04001 364 aa12.48□□□□□ -0.41
TRAPPC9-213ENST00000522504 OPN1MW2P0DN77 364 aa12.48□□□□□ -0.41
TRAPPC9-213ENST00000522504 OPN1MW3P0DN78 364 aa12.48□□□□□ -0.41
TRAPPC9-213ENST00000522504 GMFBP60983 142 aa12.48□□□□□ -0.41
TRAPPC9-213ENST00000522504 PSME3P61289 254 aa12.48□□□□□ -0.41
TRAPPC9-213ENST00000522504 KRT72Q14CN4 511 aa12.48□□□□□ -0.41
TRAPPC9-213ENST00000522504 KLHL12Q53G59 568 aa12.48□□□□□ -0.41
TRAPPC9-213ENST00000522504 STUMQ69YW2 141 aa12.48□□□□□ -0.41
TRAPPC9-213ENST00000522504 HACD2Q6Y1H2 254 aa12.48□□□□□ -0.41
TRAPPC9-213ENST00000522504 C1orf122Q6ZSJ8 110 aa12.48□□□□□ -0.41
TRAPPC9-213ENST00000522504 SLC16A9Q7RTY1 509 aa12.48□□□□□ -0.41
TRAPPC9-213ENST00000522504 DPY19L4Q7Z388 723 aa12.48□□□□□ -0.41
TRAPPC9-213ENST00000522504 ZDHHC21Q8IVQ6 265 aa12.48□□□□□ -0.41
TRAPPC9-213ENST00000522504 RNF148Q8N7C7 305 aa12.48□□□□□ -0.41
TRAPPC9-213ENST00000522504 ZNF511Q8NB15 262 aa12.48□□□□□ -0.41
TRAPPC9-213ENST00000522504 OR9Q1Q8NGQ5 310 aa12.48□□□□□ -0.41
TRAPPC9-213ENST00000522504 OR8S1Q8NH09 359 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms