RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 SPERTQ8NA61 448 aa17.23■□□□□ 0.35
SDCBP-209ENST00000522243 OR8S1Q8NH09 359 aa17.23■□□□□ 0.35
SDCBP-209ENST00000522243 RNF133Q8WVZ7 376 aa17.23■□□□□ 0.35
SDCBP-209ENST00000522243 TOR3AQ9H497 397 aa17.23■□□□□ 0.35
SDCBP-209ENST00000522243 OPA3Q9H6K4 179 aa17.23■□□□□ 0.35
SDCBP-209ENST00000522243 PPP1R3EQ9H7J1 279 aa17.23■□□□□ 0.35
SDCBP-209ENST00000522243 ZNF319Q9P2F9 582 aa17.23■□□□□ 0.35
SDCBP-209ENST00000522243 ERVK-18Q9QC07 812 aa17.23■□□□□ 0.35
SDCBP-209ENST00000522243 PRR23D1E9PI22 279 aaPredicted RBP17.22■□□□□ 0.35
SDCBP-209ENST00000522243 PHYHO14832 338 aa17.22■□□□□ 0.35
SDCBP-209ENST00000522243 ADAM20O43506 726 aa17.22■□□□□ 0.35
SDCBP-209ENST00000522243 SELENOFO60613 162 aa17.22■□□□□ 0.35
SDCBP-209ENST00000522243 E2F6O75461 281 aa17.22■□□□□ 0.35
SDCBP-209ENST00000522243 PRR23D2P0DMB1 279 aaPredicted RBP17.22■□□□□ 0.35
SDCBP-209ENST00000522243 PPIAL4GP0DN37 164 aa17.22■□□□□ 0.35
SDCBP-209ENST00000522243 EGR1P18146 543 aa17.22■□□□□ 0.35
SDCBP-209ENST00000522243 PAICSP22234 425 aaKnown RBP17.22■□□□□ 0.35
SDCBP-209ENST00000522243 PRTN3P24158 256 aa17.22■□□□□ 0.35
SDCBP-209ENST00000522243 KLHL12Q53G59 568 aa17.22■□□□□ 0.35
SDCBP-209ENST00000522243 SHFQ7M4L6 423 aa17.22■□□□□ 0.35
SDCBP-209ENST00000522243 PRSS45Q7RTY3 260 aa17.22■□□□□ 0.35
SDCBP-209ENST00000522243 SPATA24Q86W54 205 aa17.22■□□□□ 0.35
SDCBP-209ENST00000522243 GCSAMQ8N6F7 178 aa17.22■□□□□ 0.35
SDCBP-209ENST00000522243 PLPP7Q8NBV4 271 aa17.22■□□□□ 0.35
SDCBP-209ENST00000522243 RASSF4Q9H2L5 321 aa17.22■□□□□ 0.35
SDCBP-209ENST00000522243 MARCH7Q9H992 704 aa17.22■□□□□ 0.35
SDCBP-209ENST00000522243 C14orf119Q9NWQ9 140 aa17.22■□□□□ 0.35
SDCBP-209ENST00000522243 IGHV3OR15-7A0A075B7D8 119 aa17.21■□□□□ 0.35
SDCBP-209ENST00000522243 MDFIC2A0A1B0GVS7 189 aa17.21■□□□□ 0.35
SDCBP-209ENST00000522243 OOEPA6NGQ2 149 aa17.21■□□□□ 0.35
SDCBP-209ENST00000522243 PLATP00750 562 aa17.21■□□□□ 0.35
SDCBP-209ENST00000522243 GYPAP02724 150 aa17.21■□□□□ 0.35
SDCBP-209ENST00000522243 H2BFMP0C1H6 154 aa17.21■□□□□ 0.35
SDCBP-209ENST00000522243 DDOSTP39656 456 aa17.21■□□□□ 0.35
SDCBP-209ENST00000522243 FGF12P61328 243 aa17.21■□□□□ 0.35
SDCBP-209ENST00000522243 KCNJ8Q15842 424 aa17.21■□□□□ 0.35
SDCBP-209ENST00000522243 BRD3OSQ6XYD6 125 aa17.21■□□□□ 0.35
SDCBP-209ENST00000522243 TRPM8Q7Z2W7 1104 aa17.21■□□□□ 0.35
SDCBP-209ENST00000522243 WDR86Q86TI4 376 aa17.21■□□□□ 0.35
SDCBP-209ENST00000522243 THEM6Q8WUY1 208 aa17.21■□□□□ 0.35
SDCBP-209ENST00000522243 PGAM5Q96HS1 289 aa17.21■□□□□ 0.35
SDCBP-209ENST00000522243 SMURF1Q9HCE7 757 aa17.21■□□□□ 0.35
SDCBP-209ENST00000522243 TRAV38-1A0A0B4J264 116 aa17.2■□□□□ 0.34
SDCBP-209ENST00000522243 hCG_38984A0A1B0GV85 526 aa17.2■□□□□ 0.34
SDCBP-209ENST00000522243 TNFRSF13BO14836 293 aaPredicted RBP17.2■□□□□ 0.34
SDCBP-209ENST00000522243 GYG2O15488 501 aa17.2■□□□□ 0.34
SDCBP-209ENST00000522243 ENSAO43768 121 aaKnown RBP17.2■□□□□ 0.34
SDCBP-209ENST00000522243 OSMP13725 252 aa17.2■□□□□ 0.34
SDCBP-209ENST00000522243 OPRL1P41146 370 aa17.2■□□□□ 0.34
SDCBP-209ENST00000522243 NAA10P41227 235 aaPredicted RBP17.2■□□□□ 0.34
SDCBP-209ENST00000522243 NPY4RP50391 375 aa17.2■□□□□ 0.34
SDCBP-209ENST00000522243 CBX1P83916 185 aa17.2■□□□□ 0.34
SDCBP-209ENST00000522243 MZT1Q08AG7 82 aa17.2■□□□□ 0.34
SDCBP-209ENST00000522243 FLOT2Q14254 428 aa17.2■□□□□ 0.34
SDCBP-209ENST00000522243 TMEM236Q5W0B7 351 aa17.2■□□□□ 0.34
SDCBP-209ENST00000522243 CPOQ8IVL8 374 aa17.2■□□□□ 0.34
SDCBP-209ENST00000522243 C11orf53Q8IXP5 236 aa17.2■□□□□ 0.34
SDCBP-209ENST00000522243 OR10A2Q9H208 303 aa17.2■□□□□ 0.34
SDCBP-209ENST00000522243 SP140LQ9H930 580 aa17.2■□□□□ 0.34
SDCBP-209ENST00000522243 ZNF556Q9HAH1 456 aa17.2■□□□□ 0.34
SDCBP-209ENST00000522243 APOC1P02654 83 aa17.19■□□□□ 0.34
SDCBP-209ENST00000522243 LYNP07948 512 aa17.19■□□□□ 0.34
SDCBP-209ENST00000522243 HKR1P10072 659 aa17.19■□□□□ 0.34
SDCBP-209ENST00000522243 MTNR1AP48039 350 aa17.19■□□□□ 0.34
SDCBP-209ENST00000522243 GSK3AP49840 483 aa17.19■□□□□ 0.34
SDCBP-209ENST00000522243 CSNK2BP67870 215 aa17.19■□□□□ 0.34
SDCBP-209ENST00000522243 CDK5Q00535 292 aa17.19■□□□□ 0.34
SDCBP-209ENST00000522243 FAM90A1Q86YD7 464 aa17.19■□□□□ 0.34
SDCBP-209ENST00000522243 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.19■□□□□ 0.34
SDCBP-209ENST00000522243 BBS1Q8NFJ9 593 aa17.19■□□□□ 0.34
SDCBP-209ENST00000522243 OR52H1Q8NGJ2 320 aa17.19■□□□□ 0.34
SDCBP-209ENST00000522243 OTOSQ8NHW6 89 aa17.19■□□□□ 0.34
SDCBP-209ENST00000522243 LRRC29Q8WV35 223 aa17.19■□□□□ 0.34
SDCBP-209ENST00000522243 TAF15Q92804 592 aaKnown RBP eCLIP17.19■□□□□ 0.34
SDCBP-209ENST00000522243 PCGF1Q9BSM1 259 aa17.19■□□□□ 0.34
SDCBP-209ENST00000522243 KLHDC2Q9Y2U9 406 aa17.19■□□□□ 0.34
SDCBP-209ENST00000522243 RHBDD3Q9Y3P4 386 aa17.19■□□□□ 0.34
SDCBP-209ENST00000522243 PCDHGB1Q9Y5G3 927 aa17.19■□□□□ 0.34
SDCBP-209ENST00000522243 DYNC1I1O14576 645 aa17.18■□□□□ 0.34
SDCBP-209ENST00000522243 FKBP6O75344 327 aa17.18■□□□□ 0.34
SDCBP-209ENST00000522243 LHBP01229 141 aa17.18■□□□□ 0.34
SDCBP-209ENST00000522243 HMGN1P05114 100 aa17.18■□□□□ 0.34
SDCBP-209ENST00000522243 SFTPBP07988 381 aa17.18■□□□□ 0.34
SDCBP-209ENST00000522243 RPS7P62081 194 aaKnown RBP17.18■□□□□ 0.34
SDCBP-209ENST00000522243 ELF3P78545 371 aaPredicted RBP17.18■□□□□ 0.34
SDCBP-209ENST00000522243 SLC9A3R2Q15599 337 aa17.18■□□□□ 0.34
SDCBP-209ENST00000522243 DNAL1Q4LDG9 190 aa17.18■□□□□ 0.34
SDCBP-209ENST00000522243 C9orf139Q6ZV77 190 aa17.18■□□□□ 0.34
SDCBP-209ENST00000522243 OR1M1Q8NGA1 313 aa17.18■□□□□ 0.34
SDCBP-209ENST00000522243 BCAS4Q8TDM0 211 aa17.18■□□□□ 0.34
SDCBP-209ENST00000522243 PAPOLGQ9BWT3 736 aaKnown RBP17.18■□□□□ 0.34
SDCBP-209ENST00000522243 TRIM36Q9NQ86 728 aa17.18■□□□□ 0.34
SDCBP-209ENST00000522243 NDUFA2O43678 99 aa17.17■□□□□ 0.34
SDCBP-209ENST00000522243 FCN3O75636 299 aa17.17■□□□□ 0.34
SDCBP-209ENST00000522243 ANXA8P13928 327 aa17.17■□□□□ 0.34
SDCBP-209ENST00000522243 CFL1P23528 166 aaKnown RBP17.17■□□□□ 0.34
SDCBP-209ENST00000522243 CFHR2P36980 270 aa17.17■□□□□ 0.34
SDCBP-209ENST00000522243 HCCSP53701 268 aa17.17■□□□□ 0.34
SDCBP-209ENST00000522243 FOXL1Q12952 345 aa17.17■□□□□ 0.34
SDCBP-209ENST00000522243 DEFB112Q30KQ8 113 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms