RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 PPP1R3EQ9H7J1 279 aa11.5□□□□□ -0.57
CLK4-210ENST00000522136 BATF3Q9NR55 127 aa11.5□□□□□ -0.57
CLK4-210ENST00000522136 PIGLQ9Y2B2 252 aa11.5□□□□□ -0.57
CLK4-210ENST00000522136 SPEF1Q9Y4P9 236 aa11.5□□□□□ -0.57
CLK4-210ENST00000522136 TRBV5-7A0A0A0MS05 114 aa11.49□□□□□ -0.57
CLK4-210ENST00000522136 SMIM31A0A1B0GVY4 71 aa11.49□□□□□ -0.57
CLK4-210ENST00000522136 SHISA3A0PJX4 238 aa11.49□□□□□ -0.57
CLK4-210ENST00000522136 GGT3PA6NGU5 568 aa11.49□□□□□ -0.57
CLK4-210ENST00000522136 J3QW42 95 aa11.49□□□□□ -0.57
CLK4-210ENST00000522136 LILRA1O75019 489 aa11.49□□□□□ -0.57
CLK4-210ENST00000522136 CLDN1O95832 211 aa11.49□□□□□ -0.57
CLK4-210ENST00000522136 CD3EP07766 207 aa11.49□□□□□ -0.57
CLK4-210ENST00000522136 FGF9P31371 208 aaPredicted RBP11.49□□□□□ -0.57
CLK4-210ENST00000522136 THBS4P35443 961 aa11.49□□□□□ -0.57
CLK4-210ENST00000522136 TMBIM6P55061 237 aa11.49□□□□□ -0.57
CLK4-210ENST00000522136 TIMM50Q3ZCQ8 353 aa11.49□□□□□ -0.57
CLK4-210ENST00000522136 ASPHD2Q6ICH7 369 aa11.49□□□□□ -0.57
CLK4-210ENST00000522136 UNQ6126/PRO20091Q6UXV3 157 aa11.49□□□□□ -0.57
CLK4-210ENST00000522136 FBXW12Q6X9E4 464 aa11.49□□□□□ -0.57
CLK4-210ENST00000522136 Q6ZSR3 168 aa11.49□□□□□ -0.57
CLK4-210ENST00000522136 BHLHE23Q8NDY6 225 aa11.49□□□□□ -0.57
CLK4-210ENST00000522136 OR56B2PQ8NGI1 322 aa11.49□□□□□ -0.57
CLK4-210ENST00000522136 C12orf43Q96C57 262 aaKnown RBP11.49□□□□□ -0.57
CLK4-210ENST00000522136 ZNF391Q9UJN7 358 aa11.49□□□□□ -0.57
CLK4-210ENST00000522136 POU2F3Q9UKI9 436 aa11.49□□□□□ -0.57
CLK4-210ENST00000522136 KLF2Q9Y5W3 355 aaPredicted RBP11.49□□□□□ -0.57
CLK4-210ENST00000522136 PKDREJQ9NTG1 2253 aa11.49□□□□□ -0.57
CLK4-210ENST00000522136 TRAV8-7A0A075B6U6 113 aa11.48□□□□□ -0.57
CLK4-210ENST00000522136 LOC390937A0A1W2PQ73 354 aa11.48□□□□□ -0.57
CLK4-210ENST00000522136 H3BMQ9 156 aa11.48□□□□□ -0.57
CLK4-210ENST00000522136 MTRF1O75570 445 aaKnown RBP11.48□□□□□ -0.57
CLK4-210ENST00000522136 GATBO75879 557 aaKnown RBP11.48□□□□□ -0.57
CLK4-210ENST00000522136 UCHL1P09936 223 aa11.48□□□□□ -0.57
CLK4-210ENST00000522136 GALP22466 123 aa11.48□□□□□ -0.57
CLK4-210ENST00000522136 CALRP27797 417 aaKnown RBP11.48□□□□□ -0.57
CLK4-210ENST00000522136 GLRXP35754 106 aa11.48□□□□□ -0.57
CLK4-210ENST00000522136 PSG7Q13046 419 aa11.48□□□□□ -0.57
CLK4-210ENST00000522136 OR8B8Q15620 311 aa11.48□□□□□ -0.57
CLK4-210ENST00000522136 RGS7BPQ6MZT1 257 aaPredicted RBP11.48□□□□□ -0.57
CLK4-210ENST00000522136 LRP11Q86VZ4 500 aa11.48□□□□□ -0.57
CLK4-210ENST00000522136 OR5AS1Q8N127 324 aa11.48□□□□□ -0.57
CLK4-210ENST00000522136 SEMA6DQ8NFY4 1073 aa11.48□□□□□ -0.57
CLK4-210ENST00000522136 FAM222BQ8WU58 562 aa11.48□□□□□ -0.57
CLK4-210ENST00000522136 TMEM171Q8WVE6 324 aa11.48□□□□□ -0.57
CLK4-210ENST00000522136 SMIM30A4D0T7 59 aa11.48□□□□□ -0.57
CLK4-210ENST00000522136 CD300LBA8K4G0 201 aa11.48□□□□□ -0.57
CLK4-210ENST00000522136 ZNF20P17024 532 aa11.48□□□□□ -0.57
CLK4-210ENST00000522136 CFL1P23528 166 aaKnown RBP11.48□□□□□ -0.57
CLK4-210ENST00000522136 GNALP38405 381 aa11.48□□□□□ -0.57
CLK4-210ENST00000522136 PEX19P40855 299 aa11.48□□□□□ -0.57
CLK4-210ENST00000522136 MAP2K3P46734 347 aa11.48□□□□□ -0.57
CLK4-210ENST00000522136 SPCS2Q15005 226 aa11.48□□□□□ -0.57
CLK4-210ENST00000522136 ZNF718Q3SXZ3 478 aa11.48□□□□□ -0.57
CLK4-210ENST00000522136 GDPGP1Q6ZNW5 385 aa11.48□□□□□ -0.57
CLK4-210ENST00000522136 RAB2BQ8WUD1 216 aa11.48□□□□□ -0.57
CLK4-210ENST00000522136 HAVCR1Q96D42 359 aa11.48□□□□□ -0.57
CLK4-210ENST00000522136 DGCR14Q96DF8 476 aaKnown RBP11.48□□□□□ -0.57
CLK4-210ENST00000522136 PLEKHA1Q9HB21 404 aa11.48□□□□□ -0.57
CLK4-210ENST00000522136 CA10Q9NS85 328 aa11.48□□□□□ -0.57
CLK4-210ENST00000522136 TAS2R4Q9NYW5 299 aa11.48□□□□□ -0.57
CLK4-210ENST00000522136 RSL24D1Q9UHA3 163 aaKnown RBP11.48□□□□□ -0.57
CLK4-210ENST00000522136 GSTK1Q9Y2Q3 226 aa11.48□□□□□ -0.57
CLK4-210ENST00000522136 RHBDD3Q9Y3P4 386 aa11.48□□□□□ -0.57
CLK4-210ENST00000522136 RNF115Q9Y4L5 304 aa11.48□□□□□ -0.57
CLK4-210ENST00000522136 CD2P06729 351 aa11.47□□□□□ -0.57
CLK4-210ENST00000522136 RAC2P15153 192 aa11.47□□□□□ -0.57
CLK4-210ENST00000522136 ZNF12P17014 697 aa11.47□□□□□ -0.57
CLK4-210ENST00000522136 MAPK3P27361 379 aaPredicted RBP11.47□□□□□ -0.57
CLK4-210ENST00000522136 RIPPLY1Q0D2K3 151 aa11.47□□□□□ -0.57
CLK4-210ENST00000522136 HSD17B12Q53GQ0 312 aa11.47□□□□□ -0.57
CLK4-210ENST00000522136 PARP16Q8N5Y8 322 aa11.47□□□□□ -0.57
CLK4-210ENST00000522136 ACBD4Q8NC06 268 aa11.47□□□□□ -0.57
CLK4-210ENST00000522136 NUP37Q8NFH4 326 aa11.47□□□□□ -0.57
CLK4-210ENST00000522136 LILRB1Q8NHL6 650 aaPredicted RBP11.47□□□□□ -0.57
CLK4-210ENST00000522136 ZNF420Q8TAQ5 688 aaPredicted RBP11.47□□□□□ -0.57
CLK4-210ENST00000522136 NDNFQ8TB73 568 aa11.47□□□□□ -0.57
CLK4-210ENST00000522136 KCTD7Q96MP8 289 aa11.47□□□□□ -0.57
CLK4-210ENST00000522136 SYT3Q9BQG1 590 aa11.47□□□□□ -0.57
CLK4-210ENST00000522136 NDUFA13Q9P0J0 144 aa11.47□□□□□ -0.57
CLK4-210ENST00000522136 MYEF2Q9P2K5 600 aaKnown RBP11.47□□□□□ -0.57
CLK4-210ENST00000522136 DUSP13Q9UII6 198 aa11.47□□□□□ -0.57
CLK4-210ENST00000522136 LRRK2Q5S007 2527 aa11.47□□□□□ -0.57
CLK4-210ENST00000522136 E7EQL1 145 aa11.47□□□□□ -0.57
CLK4-210ENST00000522136 NOL3O60936 208 aaKnown RBP11.47□□□□□ -0.57
CLK4-210ENST00000522136 CLEC2LP0C7M8 214 aa11.47□□□□□ -0.57
CLK4-210ENST00000522136 SRMP19623 302 aa11.47□□□□□ -0.57
CLK4-210ENST00000522136 GCH1P30793 250 aa11.47□□□□□ -0.57
CLK4-210ENST00000522136 SDC2P34741 201 aa11.47□□□□□ -0.57
CLK4-210ENST00000522136 MXD1Q05195 221 aa11.47□□□□□ -0.57
CLK4-210ENST00000522136 MBNL2Q5VZF2 373 aaKnown RBP11.47□□□□□ -0.57
CLK4-210ENST00000522136 OR51A2Q8NGJ7 313 aa11.47□□□□□ -0.57
CLK4-210ENST00000522136 OPA3Q9H6K4 179 aa11.47□□□□□ -0.57
CLK4-210ENST00000522136 PURGQ9UJV8 347 aaKnown RBP11.47□□□□□ -0.57
CLK4-210ENST00000522136 ZNF250P15622 560 aa11.46□□□□□ -0.58
CLK4-210ENST00000522136 PAMR1Q6UXH9 720 aa11.46□□□□□ -0.58
CLK4-210ENST00000522136 SERPINA12Q8IW75 414 aa11.46□□□□□ -0.58
CLK4-210ENST00000522136 C1orf174Q8IYL3 243 aa11.46□□□□□ -0.58
CLK4-210ENST00000522136 OR13C9Q8NGT0 318 aa11.46□□□□□ -0.58
CLK4-210ENST00000522136 SYNPRQ8TBG9 265 aa11.46□□□□□ -0.58
CLK4-210ENST00000522136 PIGCQ92535 297 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms