RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 C2orf54Q08AI8 447 aa3.35□□□□□ -1.87
HMGB1P46-201ENST00000520062 SYCNQ0VAF6 134 aa3.35□□□□□ -1.87
HMGB1P46-201ENST00000520062 SMUG1Q53HV7 270 aa3.35□□□□□ -1.87
HMGB1P46-201ENST00000520062 C6orf183Q5T699 404 aa3.35□□□□□ -1.87
HMGB1P46-201ENST00000520062 DUPD1Q68J44 220 aa3.35□□□□□ -1.87
HMGB1P46-201ENST00000520062 SLC16A13Q7RTY0 426 aa3.35□□□□□ -1.87
HMGB1P46-201ENST00000520062 KRTAP11-1Q8IUC1 163 aa3.35□□□□□ -1.87
HMGB1P46-201ENST00000520062 CYB561D1Q8N8Q1 229 aa3.35□□□□□ -1.87
HMGB1P46-201ENST00000520062 OR6N1Q8NGY5 312 aa3.35□□□□□ -1.87
HMGB1P46-201ENST00000520062 OR6N2Q8NGY6 317 aa3.35□□□□□ -1.87
HMGB1P46-201ENST00000520062 CACNG8Q8WXS5 425 aa3.35□□□□□ -1.87
HMGB1P46-201ENST00000520062 FLYWCH2Q96CP2 140 aaKnown RBP3.35□□□□□ -1.87
HMGB1P46-201ENST00000520062 NARS2Q96I59 477 aaKnown RBP3.35□□□□□ -1.87
HMGB1P46-201ENST00000520062 SULT4A1Q9BR01 284 aa3.35□□□□□ -1.87
HMGB1P46-201ENST00000520062 EMC6Q9BV81 110 aa3.35□□□□□ -1.87
HMGB1P46-201ENST00000520062 PLA2G2FQ9BZM2 168 aa3.35□□□□□ -1.87
HMGB1P46-201ENST00000520062 RAB1BQ9H0U4 201 aa3.35□□□□□ -1.87
HMGB1P46-201ENST00000520062 SYT4Q9H2B2 425 aa3.35□□□□□ -1.87
HMGB1P46-201ENST00000520062 OR52D1Q9H346 318 aa3.35□□□□□ -1.87
HMGB1P46-201ENST00000520062 ANKHQ9HCJ1 492 aa3.35□□□□□ -1.87
HMGB1P46-201ENST00000520062 CSNK1G1Q9HCP0 422 aa3.35□□□□□ -1.87
HMGB1P46-201ENST00000520062 FBXO8Q9NRD0 319 aa3.35□□□□□ -1.87
HMGB1P46-201ENST00000520062 SIGLEC9Q9Y336 463 aa3.35□□□□□ -1.87
HMGB1P46-201ENST00000520062 KLF12Q9Y4X4 402 aa3.35□□□□□ -1.87
HMGB1P46-201ENST00000520062 TSSC4Q9Y5U2 329 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P46-201ENST00000520062 V9GYY9 64 aa3.35□□□□□ -1.87
HMGB1P46-201ENST00000520062 GPATCH8Q9UKJ3 1502 aaKnown RBP3.34□□□□□ -1.87
HMGB1P46-201ENST00000520062 IGLV3-16A0A075B6K0 115 aa3.34□□□□□ -1.87
HMGB1P46-201ENST00000520062 A0A0A6YYD5 115 aa3.34□□□□□ -1.87
HMGB1P46-201ENST00000520062 M0QX08 132 aa3.34□□□□□ -1.87
HMGB1P46-201ENST00000520062 RAD51BO15315 384 aa3.34□□□□□ -1.87
HMGB1P46-201ENST00000520062 RNF113AO15541 343 aaKnown RBP3.34□□□□□ -1.87
HMGB1P46-201ENST00000520062 ALOX12BO75342 701 aa3.34□□□□□ -1.87
HMGB1P46-201ENST00000520062 APCSP02743 223 aa3.34□□□□□ -1.87
HMGB1P46-201ENST00000520062 ARR3P36575 388 aa3.34□□□□□ -1.87
HMGB1P46-201ENST00000520062 RPS9P46781 194 aaKnown RBP3.34□□□□□ -1.87
HMGB1P46-201ENST00000520062 PPOXP50336 477 aa3.34□□□□□ -1.87
HMGB1P46-201ENST00000520062 UCNP55089 124 aa3.34□□□□□ -1.87
HMGB1P46-201ENST00000520062 ATP5J2P56134 94 aa3.34□□□□□ -1.87
HMGB1P46-201ENST00000520062 IFITM3Q01628 133 aa3.34□□□□□ -1.87
HMGB1P46-201ENST00000520062 PNOCQ13519 176 aa3.34□□□□□ -1.87
HMGB1P46-201ENST00000520062 RBMY1FQ15415 496 aaKnown RBP3.34□□□□□ -1.87
HMGB1P46-201ENST00000520062 TFDP3Q5H9I0 405 aa3.34□□□□□ -1.87
HMGB1P46-201ENST00000520062 FBXW9Q5XUX1 488 aa3.34□□□□□ -1.87
HMGB1P46-201ENST00000520062 WDR86Q86TI4 376 aa3.34□□□□□ -1.87
HMGB1P46-201ENST00000520062 WDFY1Q8IWB7 410 aa3.34□□□□□ -1.87
HMGB1P46-201ENST00000520062 RIMKLAQ8IXN7 391 aa3.34□□□□□ -1.87
HMGB1P46-201ENST00000520062 OR51A7Q8NH64 312 aa3.34□□□□□ -1.87
HMGB1P46-201ENST00000520062 RERGQ96A58 199 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P46-201ENST00000520062 TMEM243Q9BU79 118 aa3.34□□□□□ -1.87
HMGB1P46-201ENST00000520062 VCX3AQ9NNX9 186 aa3.34□□□□□ -1.87
HMGB1P46-201ENST00000520062 ZNF355PQ9NSJ1 428 aa3.34□□□□□ -1.87
HMGB1P46-201ENST00000520062 STMN3Q9NZ72 180 aa3.34□□□□□ -1.87
HMGB1P46-201ENST00000520062 CFL2Q9Y281 166 aa3.34□□□□□ -1.87
HMGB1P46-201ENST00000520062 JCADQ9P266 1359 aa3.34□□□□□ -1.88
HMGB1P46-201ENST00000520062 IGHV2OR16-5A0A0B4J2B6 119 aa3.33□□□□□ -1.88
HMGB1P46-201ENST00000520062 ANKRD20A5PA0PJZ0 165 aa3.33□□□□□ -1.88
HMGB1P46-201ENST00000520062 RSPH10B2B2RC85 870 aa3.33□□□□□ -1.88
HMGB1P46-201ENST00000520062 SEC14L6B5MCN3 397 aa3.33□□□□□ -1.88
HMGB1P46-201ENST00000520062 YKT6O15498 198 aa3.33□□□□□ -1.88
HMGB1P46-201ENST00000520062 GLSO94925 669 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P46-201ENST00000520062 CTDNEP1O95476 244 aa3.33□□□□□ -1.88
HMGB1P46-201ENST00000520062 CISD3P0C7P0 127 aa3.33□□□□□ -1.88
HMGB1P46-201ENST00000520062 RSPH10BP0C881 870 aa3.33□□□□□ -1.88
HMGB1P46-201ENST00000520062 CCL2P13500 99 aa3.33□□□□□ -1.88
HMGB1P46-201ENST00000520062 LOXP28300 417 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P46-201ENST00000520062 GNRHRP30968 328 aa3.33□□□□□ -1.88
HMGB1P46-201ENST00000520062 ERFP50548 548 aa3.33□□□□□ -1.88
HMGB1P46-201ENST00000520062 KRTAP10-7P60409 375 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P46-201ENST00000520062 RPL31P62899 125 aaKnown RBP3.33□□□□□ -1.88
HMGB1P46-201ENST00000520062 SLC35A1P78382 337 aa3.33□□□□□ -1.88
HMGB1P46-201ENST00000520062 C18orf21Q32NC0 220 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P46-201ENST00000520062 MPV17L2Q567V2 206 aa3.33□□□□□ -1.88
HMGB1P46-201ENST00000520062 STEAP4Q687X5 459 aa3.33□□□□□ -1.88
HMGB1P46-201ENST00000520062 ZFP2Q6ZN57 461 aa3.33□□□□□ -1.88
HMGB1P46-201ENST00000520062 RBM45Q8IUH3 476 aaKnown RBP3.33□□□□□ -1.88
HMGB1P46-201ENST00000520062 OR10G2Q8NGC3 310 aa3.33□□□□□ -1.88
HMGB1P46-201ENST00000520062 OR4K5Q8NGD3 323 aa3.33□□□□□ -1.88
HMGB1P46-201ENST00000520062 RXFP4Q8TDU9 374 aa3.33□□□□□ -1.88
HMGB1P46-201ENST00000520062 SMARCD1Q96GM5 515 aa3.33□□□□□ -1.88
HMGB1P46-201ENST00000520062 ZNF414Q96IQ9 312 aa3.33□□□□□ -1.88
HMGB1P46-201ENST00000520062 ZNF488Q96MN9 340 aa3.33□□□□□ -1.88
HMGB1P46-201ENST00000520062 ZNF302Q9NR11 478 aa3.33□□□□□ -1.88
HMGB1P46-201ENST00000520062 PSG11Q9UQ72 335 aa3.33□□□□□ -1.88
HMGB1P46-201ENST00000520062 ARHGAP21Q5T5U3 1957 aa3.32□□□□□ -1.88
HMGB1P46-201ENST00000520062 PIKFYVEQ9Y2I7 2098 aa3.32□□□□□ -1.88
HMGB1P46-201ENST00000520062 K7ERQ8 282 aa3.32□□□□□ -1.88
HMGB1P46-201ENST00000520062 PSPHP1O15172 72 aa3.32□□□□□ -1.88
HMGB1P46-201ENST00000520062 CHST10O43529 356 aa3.32□□□□□ -1.88
HMGB1P46-201ENST00000520062 ZNF207O43670 478 aaKnown RBP3.32□□□□□ -1.88
HMGB1P46-201ENST00000520062 SMC2O95347 1197 aa3.32□□□□□ -1.88
HMGB1P46-201ENST00000520062 OR5AL1P0C617 328 aa3.32□□□□□ -1.88
HMGB1P46-201ENST00000520062 SLC35G6P0C7Q6 338 aa3.32□□□□□ -1.88
HMGB1P46-201ENST00000520062 OR56A5P0C7T3 313 aa3.32□□□□□ -1.88
HMGB1P46-201ENST00000520062 CXCR1P25024 350 aa3.32□□□□□ -1.88
HMGB1P46-201ENST00000520062 DEKP35659 375 aaKnown RBP3.32□□□□□ -1.88
HMGB1P46-201ENST00000520062 POLR2IP36954 125 aaKnown RBP3.32□□□□□ -1.88
HMGB1P46-201ENST00000520062 GPR4P46093 362 aa3.32□□□□□ -1.88
HMGB1P46-201ENST00000520062 MLF1P58340 268 aa3.32□□□□□ -1.88
HMGB1P46-201ENST00000520062 SIGLEC14Q08ET2 396 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms