RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 MARVELD3Q96A59 401 aa12.14□□□□□ -0.47
SDC2-203ENST00000519587 SGK3Q96BR1 496 aa12.14□□□□□ -0.47
SDC2-203ENST00000519587 HAVCR1Q96D42 359 aa12.14□□□□□ -0.47
SDC2-203ENST00000519587 PDCD1LG2Q9BQ51 273 aa12.14□□□□□ -0.47
SDC2-203ENST00000519587 POFUT1Q9H488 388 aa12.14□□□□□ -0.47
SDC2-203ENST00000519587 PLK3Q9H4B4 646 aa12.14□□□□□ -0.47
SDC2-203ENST00000519587 UBTD1Q9HAC8 227 aa12.14□□□□□ -0.47
SDC2-203ENST00000519587 ZNF319Q9P2F9 582 aa12.14□□□□□ -0.47
SDC2-203ENST00000519587 DUSP13Q9UII6 198 aa12.14□□□□□ -0.47
SDC2-203ENST00000519587 NOP16Q9Y3C1 178 aaKnown RBP12.14□□□□□ -0.47
SDC2-203ENST00000519587 SIRT4Q9Y6E7 314 aaPredicted RBP12.14□□□□□ -0.47
SDC2-203ENST00000519587 PLSCR5A0PG75 271 aa12.13□□□□□ -0.47
SDC2-203ENST00000519587 C5orf63A6NC05 138 aa12.13□□□□□ -0.47
SDC2-203ENST00000519587 CCRL2O00421 344 aa12.13□□□□□ -0.47
SDC2-203ENST00000519587 INMTO95050 263 aa12.13□□□□□ -0.47
SDC2-203ENST00000519587 SERPINA3P01011 423 aa12.13□□□□□ -0.47
SDC2-203ENST00000519587 IGLV3-1P01715 115 aa12.13□□□□□ -0.47
SDC2-203ENST00000519587 IGHV3-13P01766 116 aa12.13□□□□□ -0.47
SDC2-203ENST00000519587 ZNF20P17024 532 aa12.13□□□□□ -0.47
SDC2-203ENST00000519587 KITLGP21583 273 aa12.13□□□□□ -0.47
SDC2-203ENST00000519587 MAPK3P27361 379 aaPredicted RBP12.13□□□□□ -0.47
SDC2-203ENST00000519587 GABRA5P31644 462 aa12.13□□□□□ -0.47
SDC2-203ENST00000519587 LIPAP38571 399 aa12.13□□□□□ -0.47
SDC2-203ENST00000519587 EVX1P49640 407 aa12.13□□□□□ -0.47
SDC2-203ENST00000519587 SNRPD2P62316 118 aaKnown RBP12.13□□□□□ -0.47
SDC2-203ENST00000519587 FAM3AP98173 230 aa12.13□□□□□ -0.47
SDC2-203ENST00000519587 EFNB3Q15768 340 aa12.13□□□□□ -0.47
SDC2-203ENST00000519587 NKPD1Q17RQ9 610 aa12.13□□□□□ -0.47
SDC2-203ENST00000519587 ZBTB37Q5TC79 503 aa12.13□□□□□ -0.47
SDC2-203ENST00000519587 C20orf204Q6ZNR8 217 aa12.13□□□□□ -0.47
SDC2-203ENST00000519587 SEMA6DQ8NFY4 1073 aa12.13□□□□□ -0.47
SDC2-203ENST00000519587 OR56B2PQ8NGI1 322 aa12.13□□□□□ -0.47
SDC2-203ENST00000519587 C10orf35Q96D05 121 aa12.13□□□□□ -0.47
SDC2-203ENST00000519587 CMBLQ96DG6 245 aa12.13□□□□□ -0.47
SDC2-203ENST00000519587 LYZL4Q96KX0 146 aa12.13□□□□□ -0.47
SDC2-203ENST00000519587 PGLYRP3Q96LB9 341 aa12.13□□□□□ -0.47
SDC2-203ENST00000519587 SYT3Q9BQG1 590 aa12.13□□□□□ -0.47
SDC2-203ENST00000519587 ABCB9Q9NP78 766 aa12.13□□□□□ -0.47
SDC2-203ENST00000519587 CYSLTR2Q9NS75 346 aa12.13□□□□□ -0.47
SDC2-203ENST00000519587 NDUFB11Q9NX14 153 aa12.13□□□□□ -0.47
SDC2-203ENST00000519587 PURGQ9UJV8 347 aaKnown RBP12.13□□□□□ -0.47
SDC2-203ENST00000519587 FZR1Q9UM11 496 aa12.13□□□□□ -0.47
SDC2-203ENST00000519587 DHDHQ9UQ10 334 aa12.13□□□□□ -0.47
SDC2-203ENST00000519587 SETD2Q9BYW2 2564 aaPredicted RBP12.12□□□□□ -0.47
SDC2-203ENST00000519587 RAI1Q7Z5J4 1906 aaPredicted RBP12.12□□□□□ -0.47
SDC2-203ENST00000519587 HRNRQ86YZ3 2850 aaPredicted RBP12.12□□□□□ -0.47
SDC2-203ENST00000519587 IGLV3-9A0A075B6K5 115 aa12.12□□□□□ -0.47
SDC2-203ENST00000519587 ANKRD30BLA7E2S9 258 aa12.12□□□□□ -0.47
SDC2-203ENST00000519587 CD300LBA8K4G0 201 aa12.12□□□□□ -0.47
SDC2-203ENST00000519587 IQCF6A8MYZ5 107 aa12.12□□□□□ -0.47
SDC2-203ENST00000519587 B9A039 149 aa12.12□□□□□ -0.47
SDC2-203ENST00000519587 BMP4P12644 408 aa12.12□□□□□ -0.47
SDC2-203ENST00000519587 GNALP38405 381 aa12.12□□□□□ -0.47
SDC2-203ENST00000519587 MPV17P39210 176 aa12.12□□□□□ -0.47
SDC2-203ENST00000519587 RIPPLY1Q0D2K3 151 aa12.12□□□□□ -0.47
SDC2-203ENST00000519587 PSG7Q13046 419 aa12.12□□□□□ -0.47
SDC2-203ENST00000519587 AGAP6Q5VW22 663 aa12.12□□□□□ -0.47
SDC2-203ENST00000519587 PHC2Q8IXK0 858 aa12.12□□□□□ -0.47
SDC2-203ENST00000519587 MUC15Q8N387 334 aa12.12□□□□□ -0.47
SDC2-203ENST00000519587 ZNF611Q8N823 705 aa12.12□□□□□ -0.47
SDC2-203ENST00000519587 PLPP7Q8NBV4 271 aa12.12□□□□□ -0.47
SDC2-203ENST00000519587 NEUROG1Q92886 237 aa12.12□□□□□ -0.47
SDC2-203ENST00000519587 PPP1R14AQ96A00 147 aa12.12□□□□□ -0.47
SDC2-203ENST00000519587 TMED9Q9BVK6 235 aa12.12□□□□□ -0.47
SDC2-203ENST00000519587 MRPL37Q9BZE1 423 aaKnown RBP12.12□□□□□ -0.47
SDC2-203ENST00000519587 SLC22A4Q9H015 551 aa12.12□□□□□ -0.47
SDC2-203ENST00000519587 DYNLRB1Q9NP97 96 aa12.12□□□□□ -0.47
SDC2-203ENST00000519587 ENPP5Q9UJA9 477 aa12.12□□□□□ -0.47
SDC2-203ENST00000519587 V9GYS6 101 aa12.12□□□□□ -0.47
SDC2-203ENST00000519587 ZNF816-ZNF321PA0A0X1KG74 233 aa12.11□□□□□ -0.47
SDC2-203ENST00000519587 A0A1B0GTI1 187 aa12.11□□□□□ -0.47
SDC2-203ENST00000519587 M0R233 179 aa12.11□□□□□ -0.47
SDC2-203ENST00000519587 HLA-DPB1P04440 258 aa12.11□□□□□ -0.47
SDC2-203ENST00000519587 OCM2P0CE71 109 aa12.11□□□□□ -0.47
SDC2-203ENST00000519587 ANOS1P23352 680 aa12.11□□□□□ -0.47
SDC2-203ENST00000519587 TTKP33981 857 aa12.11□□□□□ -0.47
SDC2-203ENST00000519587 GP2P55259 537 aaKnown RBP12.11□□□□□ -0.47
SDC2-203ENST00000519587 DOC2BQ14184 412 aa12.11□□□□□ -0.47
SDC2-203ENST00000519587 TIMM50Q3ZCQ8 353 aa12.11□□□□□ -0.47
SDC2-203ENST00000519587 Q499Y3 187 aa12.11□□□□□ -0.47
SDC2-203ENST00000519587 OR2T2Q6IF00 324 aa12.11□□□□□ -0.47
SDC2-203ENST00000519587 Q6ZSR3 168 aa12.11□□□□□ -0.47
SDC2-203ENST00000519587 RDH10Q8IZV5 341 aa12.11□□□□□ -0.47
SDC2-203ENST00000519587 BHLHE23Q8NDY6 225 aa12.11□□□□□ -0.47
SDC2-203ENST00000519587 LILRB1Q8NHL6 650 aaPredicted RBP12.11□□□□□ -0.47
SDC2-203ENST00000519587 PP6455Q8WZ26 134 aa12.11□□□□□ -0.47
SDC2-203ENST00000519587 MRPL15Q9P015 296 aaKnown RBP12.11□□□□□ -0.47
SDC2-203ENST00000519587 TAAR3PQ9P1P4 343 aa12.11□□□□□ -0.47
SDC2-203ENST00000519587 CKLFQ9UBR5 152 aa12.11□□□□□ -0.47
SDC2-203ENST00000519587 EDARQ9UNE0 448 aa12.11□□□□□ -0.47
SDC2-203ENST00000519587 PIGLQ9Y2B2 252 aa12.11□□□□□ -0.47
SDC2-203ENST00000519587 NF1P21359 2839 aa12.1□□□□□ -0.47
SDC2-203ENST00000519587 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.1□□□□□ -0.47
SDC2-203ENST00000519587 GATBO75879 557 aaKnown RBP12.1□□□□□ -0.47
SDC2-203ENST00000519587 RGS9O75916 674 aaPredicted RBP12.1□□□□□ -0.47
SDC2-203ENST00000519587 FAHP16930 419 aa12.1□□□□□ -0.47
SDC2-203ENST00000519587 RPL5P46777 297 aaKnown RBP12.1□□□□□ -0.47
SDC2-203ENST00000519587 PAMR1Q6UXH9 720 aa12.1□□□□□ -0.47
SDC2-203ENST00000519587 ZNF295-AS1Q8N0V1 137 aa12.1□□□□□ -0.47
SDC2-203ENST00000519587 OR5AS1Q8N127 324 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms