RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 ZNF799Q96GE5 643 aa7.86□□□□□ -1.15
HDAC3-215ENST00000519474 CMTM3Q96MX0 182 aa7.86□□□□□ -1.15
HDAC3-215ENST00000519474 TMPRSS13Q9BYE2 586 aa7.86□□□□□ -1.15
HDAC3-215ENST00000519474 MARCH7Q9H992 704 aa7.86□□□□□ -1.15
HDAC3-215ENST00000519474 IGHV3-64DA0A0J9YX35 117 aa7.85□□□□□ -1.15
HDAC3-215ENST00000519474 CD300LBA8K4G0 201 aa7.85□□□□□ -1.15
HDAC3-215ENST00000519474 H3BN98 237 aa7.85□□□□□ -1.15
HDAC3-215ENST00000519474 TRAPPC2LH3BP13 241 aa7.85□□□□□ -1.15
HDAC3-215ENST00000519474 BET1O15155 118 aa7.85□□□□□ -1.15
HDAC3-215ENST00000519474 FKBP6O75344 327 aa7.85□□□□□ -1.15
HDAC3-215ENST00000519474 GLCEO94923 617 aa7.85□□□□□ -1.15
HDAC3-215ENST00000519474 ZNF205O95201 554 aa7.85□□□□□ -1.15
HDAC3-215ENST00000519474 CRYZL1O95825 349 aa7.85□□□□□ -1.15
HDAC3-215ENST00000519474 CYB5R3P00387 301 aaPredicted RBP7.85□□□□□ -1.15
HDAC3-215ENST00000519474 IFNGP01579 166 aa7.85□□□□□ -1.15
HDAC3-215ENST00000519474 ANXA8P13928 327 aa7.85□□□□□ -1.15
HDAC3-215ENST00000519474 HOXB6P17509 224 aaKnown RBP7.85□□□□□ -1.15
HDAC3-215ENST00000519474 PCMT1P22061 227 aa7.85□□□□□ -1.15
HDAC3-215ENST00000519474 POU1F1P28069 291 aa7.85□□□□□ -1.15
HDAC3-215ENST00000519474 SLC6A9P48067 706 aa7.85□□□□□ -1.15
HDAC3-215ENST00000519474 SRP9P49458 86 aaKnown RBP7.85□□□□□ -1.15
HDAC3-215ENST00000519474 DAPP51397 102 aa7.85□□□□□ -1.15
HDAC3-215ENST00000519474 TSPAN5P62079 268 aa7.85□□□□□ -1.15
HDAC3-215ENST00000519474 MALLQ13021 153 aa7.85□□□□□ -1.15
HDAC3-215ENST00000519474 LSAMPQ13449 338 aa7.85□□□□□ -1.15
HDAC3-215ENST00000519474 ZMYND11Q15326 602 aa7.85□□□□□ -1.15
HDAC3-215ENST00000519474 TMEM155Q4W5P6 130 aa7.85□□□□□ -1.15
HDAC3-215ENST00000519474 FAM201AQ5SY85 155 aa7.85□□□□□ -1.15
HDAC3-215ENST00000519474 GLYATL3Q5SZD4 288 aa7.85□□□□□ -1.15
HDAC3-215ENST00000519474 TMEM236Q5W0B7 351 aa7.85□□□□□ -1.15
HDAC3-215ENST00000519474 DRAM2Q6UX65 266 aa7.85□□□□□ -1.15
HDAC3-215ENST00000519474 PGAP1Q75T13 922 aa7.85□□□□□ -1.15
HDAC3-215ENST00000519474 DPY19L4Q7Z388 723 aa7.85□□□□□ -1.15
HDAC3-215ENST00000519474 CLVS1Q8IUQ0 354 aaPredicted RBP7.85□□□□□ -1.15
HDAC3-215ENST00000519474 TIGD4Q8IY51 512 aa7.85□□□□□ -1.15
HDAC3-215ENST00000519474 OR10AD1Q8NGE0 317 aa7.85□□□□□ -1.15
HDAC3-215ENST00000519474 SPTSSAQ969W0 71 aa7.85□□□□□ -1.15
HDAC3-215ENST00000519474 UTP4Q969X6 686 aaKnown RBP7.85□□□□□ -1.15
HDAC3-215ENST00000519474 OPALINQ96PE5 141 aa7.85□□□□□ -1.15
HDAC3-215ENST00000519474 ABHD6Q9BV23 337 aa7.85□□□□□ -1.15
HDAC3-215ENST00000519474 OR51V1Q9H2C8 321 aa7.85□□□□□ -1.15
HDAC3-215ENST00000519474 METTL17Q9H7H0 456 aaPredicted RBP7.85□□□□□ -1.15
HDAC3-215ENST00000519474 MMP26Q9NRE1 261 aa7.85□□□□□ -1.15
HDAC3-215ENST00000519474 RHBDL2Q9NX52 303 aa7.85□□□□□ -1.15
HDAC3-215ENST00000519474 ZNF319Q9P2F9 582 aa7.85□□□□□ -1.15
HDAC3-215ENST00000519474 DNAJB9Q9UBS3 223 aa7.85□□□□□ -1.15
HDAC3-215ENST00000519474 OPN4Q9UHM6 478 aa7.85□□□□□ -1.15
HDAC3-215ENST00000519474 POLR3KQ9Y2Y1 108 aaPredicted RBP7.85□□□□□ -1.15
HDAC3-215ENST00000519474 DMRT1Q9Y5R6 373 aa7.85□□□□□ -1.15
HDAC3-215ENST00000519474 FBN1P35555 2871 aaKnown RBP7.85□□□□□ -1.15
HDAC3-215ENST00000519474 PPIAL4EA0A075B759 164 aa7.84□□□□□ -1.15
HDAC3-215ENST00000519474 LOC105371242A0A075B767 164 aa7.84□□□□□ -1.15
HDAC3-215ENST00000519474 PPIAL4CA0A0B4J2A2 164 aa7.84□□□□□ -1.15
HDAC3-215ENST00000519474 ISPDA4D126 451 aa7.84□□□□□ -1.15
HDAC3-215ENST00000519474 ANKRD34BA5PLL1 514 aa7.84□□□□□ -1.15
HDAC3-215ENST00000519474 RIIAD1A6NNX1 92 aa7.84□□□□□ -1.15
HDAC3-215ENST00000519474 F5H0A9 414 aaPredicted RBP7.84□□□□□ -1.15
HDAC3-215ENST00000519474 PPIAL4DF5H284 164 aa7.84□□□□□ -1.15
HDAC3-215ENST00000519474 IFNL4K9M1U5 179 aa7.84□□□□□ -1.15
HDAC3-215ENST00000519474 NDUFA2O43678 99 aa7.84□□□□□ -1.15
HDAC3-215ENST00000519474 GATCO43716 136 aaKnown RBP7.84□□□□□ -1.15
HDAC3-215ENST00000519474 PNPP00491 289 aa7.84□□□□□ -1.15
HDAC3-215ENST00000519474 SPARCP09486 303 aa7.84□□□□□ -1.15
HDAC3-215ENST00000519474 PPIAL4FP0DN26 164 aa7.84□□□□□ -1.15
HDAC3-215ENST00000519474 SLC2A1P11166 492 aa7.84□□□□□ -1.15
HDAC3-215ENST00000519474 CA6P23280 308 aa7.84□□□□□ -1.15
HDAC3-215ENST00000519474 GSTT1P30711 240 aa7.84□□□□□ -1.15
HDAC3-215ENST00000519474 GATA4P43694 442 aa7.84□□□□□ -1.15
HDAC3-215ENST00000519474 RAB14P61106 215 aa7.84□□□□□ -1.15
HDAC3-215ENST00000519474 SEC61A1P61619 476 aaKnown RBP7.84□□□□□ -1.15
HDAC3-215ENST00000519474 BTG1P62324 171 aa7.84□□□□□ -1.15
HDAC3-215ENST00000519474 LCN2P80188 198 aa7.84□□□□□ -1.15
HDAC3-215ENST00000519474 EIF2B1Q14232 305 aaKnown RBP7.84□□□□□ -1.15
HDAC3-215ENST00000519474 TAF13Q15543 124 aa7.84□□□□□ -1.15
HDAC3-215ENST00000519474 MPPED2Q15777 294 aa7.84□□□□□ -1.15
HDAC3-215ENST00000519474 ZNF181Q2M3W8 571 aa7.84□□□□□ -1.15
HDAC3-215ENST00000519474 MAJINQ3KP22 176 aa7.84□□□□□ -1.15
HDAC3-215ENST00000519474 LIPNQ5VXI9 398 aa7.84□□□□□ -1.15
HDAC3-215ENST00000519474 SPATC1Q76KD6 591 aa7.84□□□□□ -1.15
HDAC3-215ENST00000519474 SHFQ7M4L6 423 aa7.84□□□□□ -1.15
HDAC3-215ENST00000519474 PRSS45Q7RTY3 260 aa7.84□□□□□ -1.15
HDAC3-215ENST00000519474 CROCCP3Q8IVE0 287 aa7.84□□□□□ -1.15
HDAC3-215ENST00000519474 CPOQ8IVL8 374 aa7.84□□□□□ -1.15
HDAC3-215ENST00000519474 RFLNBQ8N5W9 214 aa7.84□□□□□ -1.15
HDAC3-215ENST00000519474 CELF2-AS1Q8N7Q2 184 aa7.84□□□□□ -1.15
HDAC3-215ENST00000519474 OR6K6Q8NGW6 343 aa7.84□□□□□ -1.15
HDAC3-215ENST00000519474 OR2AE1Q8NHA4 323 aa7.84□□□□□ -1.15
HDAC3-215ENST00000519474 AMELYQ99218 206 aa7.84□□□□□ -1.15
HDAC3-215ENST00000519474 C7orf69Q9H7B7 122 aa7.84□□□□□ -1.15
HDAC3-215ENST00000519474 PCDHB10Q9UN67 800 aa7.84□□□□□ -1.15
HDAC3-215ENST00000519474 CUBNO60494 3623 aa7.83□□□□□ -1.16
HDAC3-215ENST00000519474 TANC2Q9HCD6 1990 aa7.83□□□□□ -1.16
HDAC3-215ENST00000519474 GGT3PA6NGU5 568 aa7.83□□□□□ -1.16
HDAC3-215ENST00000519474 PRR23D1E9PI22 279 aaPredicted RBP7.83□□□□□ -1.16
HDAC3-215ENST00000519474 J3QLI3 93 aa7.83□□□□□ -1.16
HDAC3-215ENST00000519474 TNFRSF13BO14836 293 aaPredicted RBP7.83□□□□□ -1.16
HDAC3-215ENST00000519474 FOXH1O75593 365 aa7.83□□□□□ -1.16
HDAC3-215ENST00000519474 VENTXO95231 258 aa7.83□□□□□ -1.16
HDAC3-215ENST00000519474 FSTL3O95633 263 aa7.83□□□□□ -1.16
HDAC3-215ENST00000519474 PTBP3O95758 552 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms