RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 CAV3P56539 151 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 FAM3BP58499 235 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 TAS2R31P59538 309 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 UBE2NP61088 152 aaKnown RBP4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 RPS14P62263 151 aaKnown RBP4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 SLC6A3Q01959 620 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 ZNF763Q0D2J5 394 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 ZNF154Q13106 437 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 CTBP1Q13363 440 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 PRSS8Q16651 343 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 QRICH1Q2TAL8 776 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 MST1LQ2TV78 715 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 SYT14P1Q58G82 188 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 LDLRAD2Q5SZI1 272 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 MARC1Q5VT66 337 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 SDHAF4Q5VUM1 108 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 NCBP2-AS2Q69YL0 99 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 PODNL1Q6PEZ8 512 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 FRRS1Q6ZNA5 592 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 DNM1P46Q6ZS02 220 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 Q6ZSR9 355 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 TMPPEQ6ZT21 453 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 GTF2H5Q6ZYL4 71 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 TAS1R1Q7RTX1 841 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 SERPINA9Q86WD7 417 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 C4orf19Q8IY42 314 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 NXPE1Q8N323 547 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 D2HGDHQ8N465 521 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 RNF175Q8N4F7 328 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 STXBP6Q8NFX7 210 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 GPR150Q8NGU9 434 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 PPP1R1CQ8WVI7 109 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 SKA2Q8WVK7 121 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 PSMF1Q92530 271 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 NINJ1Q92982 152 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 TSLPQ969D9 159 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 SLC25A28Q96A46 364 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 MOAP1Q96BY2 351 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 RAX2Q96IS3 184 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 ZNF582Q96NG8 517 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 PGLYRP2Q96PD5 576 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 SCGB3A2Q96PL1 93 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 AQP10Q96PS8 301 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 ATOH8Q96SQ7 321 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 CD180Q99467 661 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 NDC1Q9BTX1 674 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 SLC46A2Q9BY10 475 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 RAB33BQ9H082 229 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 SPATC1LQ9H0A9 340 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 MFSD1Q9H3U5 465 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 TMEM231Q9H6L2 316 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 GREM2Q9H772 168 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 RDH14Q9HBH5 336 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 LRTM1Q9HBL6 345 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 TAF9BQ9HBM6 251 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 GPR35Q9HC97 309 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 ACER3Q9NUN7 267 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 DNAJC27Q9NZQ0 273 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 B4GALT6Q9UBX8 382 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 TBC1D29Q9UFV1 150 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 PADI3Q9ULW8 664 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 LAMTOR2Q9Y2Q5 125 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 WIPI2Q9Y4P8 454 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 OR51B2Q9Y5P1 312 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 ZNF646O15015 1829 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 RICTORQ6R327 1708 aa4.29□□□□□ -1.72
HMGB1P19-201ENST00000517578 ARID2Q68CP9 1835 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 PATJQ8NI35 1801 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 ARFGEF1Q9Y6D6 1849 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 A0A1W2PPE2 198 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 FAM230AA0A1W2PPH8 454 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 OR5B21A6NL26 309 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 AQP7P3A6NL99 342 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 PEX12O00623 359 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 SLC16A5O15375 505 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 IRAK2O43187 625 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 RBFOX2O43251 390 aaKnown RBP eCLIP4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 ZNF354AO60765 605 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 DIRAS1O95057 198 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 WISP3O95389 354 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 TXNDC12O95881 172 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 HBE1P02100 147 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 PGA3P0DJD8 388 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 ESDP10768 282 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 LIPCP11150 499 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 LYL1P12980 280 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 PGAM2P15259 253 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 SELEP16581 610 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 TUBG1P23258 451 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 APLNRP35414 380 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 MPLP40238 635 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 OPRD1P41143 372 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 PTGER3P43115 390 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 PPICP45877 212 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 XCR1P46094 333 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 METAP1P53582 386 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 TPPP2P59282 170 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 ARF3P61204 181 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 TBPL1P62380 186 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 ARF1P84077 181 aaKnown RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms