RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 ZNF75AQ96N20 296 aa0.64□□□□□ -2.31
RNU6-1088P-201ENST00000516850 ANKRD60Q9BZ19 345 aa0.64□□□□□ -2.31
RNU6-1088P-201ENST00000516850 RRAGDQ9NQL2 400 aaPredicted RBP0.64□□□□□ -2.31
RNU6-1088P-201ENST00000516850 CAB39Q9Y376 341 aaPredicted RBP0.64□□□□□ -2.31
RNU6-1088P-201ENST00000516850 CHTOPQ9Y3Y2 248 aaKnown RBP0.64□□□□□ -2.31
RNU6-1088P-201ENST00000516850 PCDH11XQ9BZA7 1347 aa0.64□□□□□ -2.31
RNU6-1088P-201ENST00000516850 A0A1W2PNM2 257 aa0.63□□□□□ -2.31
RNU6-1088P-201ENST00000516850 MYBPHLA2RUH7 354 aa0.63□□□□□ -2.31
RNU6-1088P-201ENST00000516850 IZUMO1RA6ND01 250 aa0.63□□□□□ -2.31
RNU6-1088P-201ENST00000516850 NCBP2LA6PVI3 153 aaKnown RBP0.63□□□□□ -2.31
RNU6-1088P-201ENST00000516850 H3BQ85 93 aa0.63□□□□□ -2.31
RNU6-1088P-201ENST00000516850 RAD1O60671 282 aa0.63□□□□□ -2.31
RNU6-1088P-201ENST00000516850 FLOT1O75955 427 aa0.63□□□□□ -2.31
RNU6-1088P-201ENST00000516850 TGM6O95932 706 aa0.63□□□□□ -2.31
RNU6-1088P-201ENST00000516850 ZNF708P17019 499 aa0.63□□□□□ -2.31
RNU6-1088P-201ENST00000516850 ZNF24P17028 368 aa0.63□□□□□ -2.31
RNU6-1088P-201ENST00000516850 OTX1P32242 354 aaPredicted RBP0.63□□□□□ -2.31
RNU6-1088P-201ENST00000516850 APLNRP35414 380 aa0.63□□□□□ -2.31
RNU6-1088P-201ENST00000516850 NDUFA8P51970 172 aa0.63□□□□□ -2.31
RNU6-1088P-201ENST00000516850 PPP1CAP62136 330 aa0.63□□□□□ -2.31
RNU6-1088P-201ENST00000516850 LIPEQ05469 1076 aa0.63□□□□□ -2.31
RNU6-1088P-201ENST00000516850 ZNF678Q5SXM1 525 aa0.63□□□□□ -2.31
RNU6-1088P-201ENST00000516850 MRPL2Q5T653 305 aaKnown RBP0.63□□□□□ -2.31
RNU6-1088P-201ENST00000516850 MFSD14CQ5VZR4 134 aa0.63□□□□□ -2.31
RNU6-1088P-201ENST00000516850 CDH26Q8IXH8 852 aa0.63□□□□□ -2.31
RNU6-1088P-201ENST00000516850 CPNE9Q8IYJ1 553 aa0.63□□□□□ -2.31
RNU6-1088P-201ENST00000516850 OR4K13Q8NH42 304 aa0.63□□□□□ -2.31
RNU6-1088P-201ENST00000516850 ZNF606Q8WXB4 792 aa0.63□□□□□ -2.31
RNU6-1088P-201ENST00000516850 RSPH1Q8WYR4 309 aa0.63□□□□□ -2.31
RNU6-1088P-201ENST00000516850 CCDC59Q9P031 241 aaKnown RBP0.63□□□□□ -2.31
RNU6-1088P-201ENST00000516850 STARD10Q9Y365 291 aa0.63□□□□□ -2.31
RNU6-1088P-201ENST00000516850 C2orf16Q68DN1 1984 aa0.63□□□□□ -2.31
RNU6-1088P-201ENST00000516850 SIGLEC1Q9BZZ2 1709 aa0.62□□□□□ -2.31
RNU6-1088P-201ENST00000516850 IGKV1D-43A0A0B4J1Z2 117 aa0.62□□□□□ -2.31
RNU6-1088P-201ENST00000516850 FAM240BA0A1B0GVZ2 78 aa0.62□□□□□ -2.31
RNU6-1088P-201ENST00000516850 SMCO2A6NFE2 343 aa0.62□□□□□ -2.31
RNU6-1088P-201ENST00000516850 GGTLC3B5MD39 225 aa0.62□□□□□ -2.31
RNU6-1088P-201ENST00000516850 H0YCG3 227 aa0.62□□□□□ -2.31
RNU6-1088P-201ENST00000516850 NMT2O60551 498 aa0.62□□□□□ -2.31
RNU6-1088P-201ENST00000516850 CLDN11O75508 207 aa0.62□□□□□ -2.31
RNU6-1088P-201ENST00000516850 IL1BP01584 269 aa0.62□□□□□ -2.31
RNU6-1088P-201ENST00000516850 SERPINE2P07093 398 aa0.62□□□□□ -2.31
RNU6-1088P-201ENST00000516850 ANXA5P08758 320 aa0.62□□□□□ -2.31
RNU6-1088P-201ENST00000516850 ZNF43P17038 809 aa0.62□□□□□ -2.31
RNU6-1088P-201ENST00000516850 SLC1A1P43005 524 aa0.62□□□□□ -2.31
RNU6-1088P-201ENST00000516850 TNNT2P45379 298 aaPredicted RBP0.62□□□□□ -2.31
RNU6-1088P-201ENST00000516850 OR1G1P47890 313 aa0.62□□□□□ -2.31
RNU6-1088P-201ENST00000516850 ACLYP53396 1101 aa0.62□□□□□ -2.31
RNU6-1088P-201ENST00000516850 TSC22D1Q15714 1073 aa0.62□□□□□ -2.31
RNU6-1088P-201ENST00000516850 TTC19Q6DKK2 380 aaPredicted RBP0.62□□□□□ -2.31
RNU6-1088P-201ENST00000516850 Q6ZSR3 168 aa0.62□□□□□ -2.31
RNU6-1088P-201ENST00000516850 FA2HQ7L5A8 372 aa0.62□□□□□ -2.31
RNU6-1088P-201ENST00000516850 DEFB119Q8N690 84 aa0.62□□□□□ -2.31
RNU6-1088P-201ENST00000516850 BPIFCQ8NFQ6 507 aa0.62□□□□□ -2.31
RNU6-1088P-201ENST00000516850 OR4D6Q8NGJ1 314 aa0.62□□□□□ -2.31
RNU6-1088P-201ENST00000516850 OR8K3Q8NH51 312 aa0.62□□□□□ -2.31
RNU6-1088P-201ENST00000516850 SLC25A44Q96H78 314 aaPredicted RBP0.62□□□□□ -2.31
RNU6-1088P-201ENST00000516850 ILKAPQ9H0C8 392 aaPredicted RBP0.62□□□□□ -2.31
RNU6-1088P-201ENST00000516850 SLC39A1Q9NY26 324 aa0.62□□□□□ -2.31
RNU6-1088P-201ENST00000516850 PSMC3IPQ9P2W1 217 aaPredicted RBP0.62□□□□□ -2.31
RNU6-1088P-201ENST00000516850 STX18Q9P2W9 335 aaKnown RBP0.62□□□□□ -2.31
RNU6-1088P-201ENST00000516850 COL4A1P02462 1669 aa0.62□□□□□ -2.31
RNU6-1088P-201ENST00000516850 BAZ1BQ9UIG0 1483 aaKnown RBP0.61□□□□□ -2.31
RNU6-1088P-201ENST00000516850 BRD4O60885 1362 aaPredicted RBP0.61□□□□□ -2.31
RNU6-1088P-201ENST00000516850 A6NDN8 102 aa0.61□□□□□ -2.31
RNU6-1088P-201ENST00000516850 SLC31A1O15431 190 aa0.61□□□□□ -2.31
RNU6-1088P-201ENST00000516850 FGFR1OPO95684 399 aaKnown RBP0.61□□□□□ -2.31
RNU6-1088P-201ENST00000516850 TSPAN13O95857 204 aa0.61□□□□□ -2.31
RNU6-1088P-201ENST00000516850 ANGP03950 147 aaKnown RBP0.61□□□□□ -2.31
RNU6-1088P-201ENST00000516850 OR5AC1P0C628 307 aa0.61□□□□□ -2.31
RNU6-1088P-201ENST00000516850 CD70P32970 193 aa0.61□□□□□ -2.31
RNU6-1088P-201ENST00000516850 CCL23P55773 120 aa0.61□□□□□ -2.31
RNU6-1088P-201ENST00000516850 ZNF121P58317 390 aaPredicted RBP0.61□□□□□ -2.31
RNU6-1088P-201ENST00000516850 BPIFB3P59826 476 aa0.61□□□□□ -2.31
RNU6-1088P-201ENST00000516850 ZNF829Q3KNS6 432 aaPredicted RBP0.61□□□□□ -2.31
RNU6-1088P-201ENST00000516850 RNASE11Q8TAA1 199 aaKnown RBP0.61□□□□□ -2.31
RNU6-1088P-201ENST00000516850 NUBPLQ8TB37 319 aa0.61□□□□□ -2.31
RNU6-1088P-201ENST00000516850 EMC6Q9BV81 110 aa0.61□□□□□ -2.31
RNU6-1088P-201ENST00000516850 MS4A8Q9BY19 250 aa0.61□□□□□ -2.31
RNU6-1088P-201ENST00000516850 OR51M1Q9H341 326 aa0.61□□□□□ -2.31
RNU6-1088P-201ENST00000516850 RGS18Q9NS28 235 aa0.61□□□□□ -2.31
RNU6-1088P-201ENST00000516850 CES1P1Q9UKY3 287 aa0.61□□□□□ -2.31
RNU6-1088P-201ENST00000516850 ACOT9Q9Y305 439 aa0.61□□□□□ -2.31
RNU6-1088P-201ENST00000516850 TRAPPC1Q9Y5R8 145 aa0.61□□□□□ -2.31
RNU6-1088P-201ENST00000516850 RP1L1Q8IWN7 2480 aaPredicted RBP0.61□□□□□ -2.31
RNU6-1088P-201ENST00000516850 MROH5Q6ZUA9 1318 aa0.61□□□□□ -2.31
RNU6-1088P-201ENST00000516850 H7C0C1 242 aa0.6□□□□□ -2.31
RNU6-1088P-201ENST00000516850 AQP8O94778 261 aa0.6□□□□□ -2.31
RNU6-1088P-201ENST00000516850 S1PR2O95136 353 aa0.6□□□□□ -2.31
RNU6-1088P-201ENST00000516850 HPRT1P00492 218 aa0.6□□□□□ -2.31
RNU6-1088P-201ENST00000516850 GLRA2P23416 452 aa0.6□□□□□ -2.31
RNU6-1088P-201ENST00000516850 HNRNPH3P31942 346 aaKnown RBP0.6□□□□□ -2.31
RNU6-1088P-201ENST00000516850 ATP5OP48047 213 aa0.6□□□□□ -2.31
RNU6-1088P-201ENST00000516850 PPP1R7Q15435 360 aa0.6□□□□□ -2.31
RNU6-1088P-201ENST00000516850 LRRC8AQ8IWT6 810 aa0.6□□□□□ -2.31
RNU6-1088P-201ENST00000516850 CMTM1Q8IZ96 169 aa0.6□□□□□ -2.31
RNU6-1088P-201ENST00000516850 IQCKQ8N0W5 287 aa0.6□□□□□ -2.31
RNU6-1088P-201ENST00000516850 DNAAF3Q8N9W5 541 aa0.6□□□□□ -2.31
RNU6-1088P-201ENST00000516850 KIFAP3Q92845 792 aa0.6□□□□□ -2.31
RNU6-1088P-201ENST00000516850 YIPF6Q96EC8 236 aa0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms