RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 TMEM155Q4W5P6 130 aa9.62□□□□□ -0.87
VCAN-212ENST00000515397 AADACL4Q5VUY2 407 aa9.62□□□□□ -0.87
VCAN-212ENST00000515397 C12orf73Q69YU5 71 aa9.62□□□□□ -0.87
VCAN-212ENST00000515397 PLEKHG7Q6ZR37 379 aa9.62□□□□□ -0.87
VCAN-212ENST00000515397 MEPCEQ7L2J0 689 aaKnown RBP9.62□□□□□ -0.87
VCAN-212ENST00000515397 WDR86Q86TI4 376 aa9.62□□□□□ -0.87
VCAN-212ENST00000515397 ZNF454Q8N9F8 522 aa9.62□□□□□ -0.87
VCAN-212ENST00000515397 OR4M2Q8NGB6 313 aa9.62□□□□□ -0.87
VCAN-212ENST00000515397 DNAJC9Q8WXX5 260 aa9.62□□□□□ -0.87
VCAN-212ENST00000515397 SPSB4Q96A44 273 aa9.62□□□□□ -0.87
VCAN-212ENST00000515397 SEH1LQ96EE3 360 aa9.62□□□□□ -0.87
VCAN-212ENST00000515397 CENPNQ96H22 339 aaPredicted RBP9.62□□□□□ -0.87
VCAN-212ENST00000515397 TBX5Q99593 518 aa9.62□□□□□ -0.87
VCAN-212ENST00000515397 APOL4Q9BPW4 351 aa9.62□□□□□ -0.87
VCAN-212ENST00000515397 OR10A2Q9H208 303 aa9.62□□□□□ -0.87
VCAN-212ENST00000515397 MRPL15Q9P015 296 aaKnown RBP9.62□□□□□ -0.87
VCAN-212ENST00000515397 H2AFY2Q9P0M6 372 aaPredicted RBP9.62□□□□□ -0.87
VCAN-212ENST00000515397 PPIAL4AQ9Y536 164 aa9.62□□□□□ -0.87
VCAN-212ENST00000515397 TANC2Q9HCD6 1990 aa9.62□□□□□ -0.87
VCAN-212ENST00000515397 IGHV3OR16-10A0A075B7F0 116 aa9.61□□□□□ -0.87
VCAN-212ENST00000515397 hCG_38984A0A1B0GV85 526 aa9.61□□□□□ -0.87
VCAN-212ENST00000515397 hCG_1807616A0A1W2PRN6 198 aa9.61□□□□□ -0.87
VCAN-212ENST00000515397 ANKRD30BLA7E2S9 258 aa9.61□□□□□ -0.87
VCAN-212ENST00000515397 ZNF850A8MQ14 1090 aa9.61□□□□□ -0.87
VCAN-212ENST00000515397 F5H0A9 414 aaPredicted RBP9.61□□□□□ -0.87
VCAN-212ENST00000515397 H3BNX3 289 aa9.61□□□□□ -0.87
VCAN-212ENST00000515397 GMDSO60547 372 aa9.61□□□□□ -0.87
VCAN-212ENST00000515397 FOXH1O75593 365 aa9.61□□□□□ -0.87
VCAN-212ENST00000515397 VENTXO95231 258 aa9.61□□□□□ -0.87
VCAN-212ENST00000515397 FCGR1AP12314 374 aa9.61□□□□□ -0.87
VCAN-212ENST00000515397 RPS2P15880 293 aaKnown RBP9.61□□□□□ -0.87
VCAN-212ENST00000515397 EGR1P18146 543 aa9.61□□□□□ -0.87
VCAN-212ENST00000515397 PCMT1P22061 227 aa9.61□□□□□ -0.87
VCAN-212ENST00000515397 GATA4P43694 442 aa9.61□□□□□ -0.87
VCAN-212ENST00000515397 CSNK2BP67870 215 aa9.61□□□□□ -0.87
VCAN-212ENST00000515397 KLBQ86Z14 1044 aa9.61□□□□□ -0.87
VCAN-212ENST00000515397 C11orf53Q8IXP5 236 aa9.61□□□□□ -0.87
VCAN-212ENST00000515397 OR8B12Q8NGG6 310 aa9.61□□□□□ -0.87
VCAN-212ENST00000515397 OR52H1Q8NGJ2 320 aa9.61□□□□□ -0.87
VCAN-212ENST00000515397 OR11L1Q8NGX0 322 aa9.61□□□□□ -0.87
VCAN-212ENST00000515397 OR8S1Q8NH09 359 aa9.61□□□□□ -0.87
VCAN-212ENST00000515397 TMEM163Q8TC26 289 aa9.61□□□□□ -0.87
VCAN-212ENST00000515397 TMEM158Q8WZ71 300 aa9.61□□□□□ -0.87
VCAN-212ENST00000515397 PIGCQ92535 297 aa9.61□□□□□ -0.87
VCAN-212ENST00000515397 PAPOLGQ9BWT3 736 aaKnown RBP9.61□□□□□ -0.87
VCAN-212ENST00000515397 YIPF3Q9GZM5 350 aa9.61□□□□□ -0.87
VCAN-212ENST00000515397 GABARAPL1Q9H0R8 117 aa9.61□□□□□ -0.87
VCAN-212ENST00000515397 FN3KRPQ9HA64 309 aa9.61□□□□□ -0.87
VCAN-212ENST00000515397 RNF7Q9UBF6 113 aa9.61□□□□□ -0.87
VCAN-212ENST00000515397 AASSQ9UDR5 926 aa9.61□□□□□ -0.87
VCAN-212ENST00000515397 IKZF2Q9UKS7 526 aa9.61□□□□□ -0.87
VCAN-212ENST00000515397 SOX21Q9Y651 276 aaPredicted RBP9.61□□□□□ -0.87
VCAN-212ENST00000515397 H3BSH0 61 aa9.6□□□□□ -0.87
VCAN-212ENST00000515397 IFNL4K9M1U5 179 aa9.6□□□□□ -0.87
VCAN-212ENST00000515397 APOC1P02654 83 aa9.6□□□□□ -0.87
VCAN-212ENST00000515397 GYPAP02724 150 aa9.6□□□□□ -0.87
VCAN-212ENST00000515397 TFF1P04155 84 aa9.6□□□□□ -0.87
VCAN-212ENST00000515397 DDOSTP39656 456 aa9.6□□□□□ -0.87
VCAN-212ENST00000515397 CXCR4P61073 352 aa9.6□□□□□ -0.87
VCAN-212ENST00000515397 ACTR3P61158 418 aa9.6□□□□□ -0.87
VCAN-212ENST00000515397 MFGE8Q08431 387 aaPredicted RBP9.6□□□□□ -0.87
VCAN-212ENST00000515397 OR8B8Q15620 311 aa9.6□□□□□ -0.87
VCAN-212ENST00000515397 ZNF404Q494X3 552 aa9.6□□□□□ -0.87
VCAN-212ENST00000515397 ESCO2Q56NI9 601 aa9.6□□□□□ -0.87
VCAN-212ENST00000515397 SSX6Q7RTT6 188 aa9.6□□□□□ -0.87
VCAN-212ENST00000515397 SLC35F2Q8IXU6 374 aa9.6□□□□□ -0.87
VCAN-212ENST00000515397 C1orf87Q8N0U7 546 aa9.6□□□□□ -0.87
VCAN-212ENST00000515397 MUC20Q8N307 709 aaPredicted RBP9.6□□□□□ -0.87
VCAN-212ENST00000515397 CELF2-AS1Q8N7Q2 184 aa9.6□□□□□ -0.87
VCAN-212ENST00000515397 OR51G2Q8NGK0 314 aa9.6□□□□□ -0.87
VCAN-212ENST00000515397 Q8TCH9 128 aa9.6□□□□□ -0.87
VCAN-212ENST00000515397 CNN2Q99439 309 aaKnown RBP9.6□□□□□ -0.87
VCAN-212ENST00000515397 OSBPL10Q9BXB5 764 aa9.6□□□□□ -0.87
VCAN-212ENST00000515397 FGF23Q9GZV9 251 aaPredicted RBP9.6□□□□□ -0.87
VCAN-212ENST00000515397 SLC22A4Q9H015 551 aa9.6□□□□□ -0.87
VCAN-212ENST00000515397 SP140LQ9H930 580 aa9.6□□□□□ -0.87
VCAN-212ENST00000515397 GTF2A1LQ9UNN4 478 aa9.6□□□□□ -0.87
VCAN-212ENST00000515397 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.59□□□□□ -0.87
VCAN-212ENST00000515397 TMEM269A0A1B0GVZ9 245 aa9.59□□□□□ -0.87
VCAN-212ENST00000515397 A0A1B0GW55 424 aa9.59□□□□□ -0.87
VCAN-212ENST00000515397 A6NIN4 97 aa9.59□□□□□ -0.87
VCAN-212ENST00000515397 TCF21O43680 179 aa9.59□□□□□ -0.87
VCAN-212ENST00000515397 DUX4L2P0CJ85 424 aa9.59□□□□□ -0.87
VCAN-212ENST00000515397 DUX4L3P0CJ86 424 aa9.59□□□□□ -0.87
VCAN-212ENST00000515397 DUX4L4P0CJ87 422 aa9.59□□□□□ -0.87
VCAN-212ENST00000515397 DUX4L5P0CJ88 424 aa9.59□□□□□ -0.87
VCAN-212ENST00000515397 DUX4L6P0CJ89 424 aa9.59□□□□□ -0.87
VCAN-212ENST00000515397 DUX4L7P0CJ90 424 aa9.59□□□□□ -0.87
VCAN-212ENST00000515397 EPHA1P21709 976 aa9.59□□□□□ -0.87
VCAN-212ENST00000515397 THBS2P35442 1172 aa9.59□□□□□ -0.87
VCAN-212ENST00000515397 GNALP38405 381 aa9.59□□□□□ -0.87
VCAN-212ENST00000515397 PITPNBP48739 271 aa9.59□□□□□ -0.87
VCAN-212ENST00000515397 GNB2P62879 340 aa9.59□□□□□ -0.87
VCAN-212ENST00000515397 ZNF154Q13106 437 aa9.59□□□□□ -0.87
VCAN-212ENST00000515397 PRDX4Q13162 271 aa9.59□□□□□ -0.87
VCAN-212ENST00000515397 ZNF181Q2M3W8 571 aa9.59□□□□□ -0.87
VCAN-212ENST00000515397 LCN1P1Q5VSP4 162 aa9.59□□□□□ -0.87
VCAN-212ENST00000515397 DUX4L9Q6RFH8 374 aaPredicted RBP9.59□□□□□ -0.87
VCAN-212ENST00000515397 ZNF322Q6U7Q0 402 aaPredicted RBP9.59□□□□□ -0.87
VCAN-212ENST00000515397 KCTD8Q6ZWB6 473 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms