RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 OR8B2Q96RD0 313 aa20.5■□□□□ 0.87
SNF8-213ENST00000514929 MRI1Q9BV20 369 aa20.5■□□□□ 0.87
SNF8-213ENST00000514929 C14orf119Q9NWQ9 140 aa20.5■□□□□ 0.87
SNF8-213ENST00000514929 AUP1Q9Y679 476 aa20.5■□□□□ 0.87
SNF8-213ENST00000514929 G3V2T6 193 aa20.49■□□□□ 0.87
SNF8-213ENST00000514929 SLC2A5P22732 501 aa20.49■□□□□ 0.87
SNF8-213ENST00000514929 FASP25445 335 aa20.49■□□□□ 0.87
SNF8-213ENST00000514929 PTGES3Q15185 160 aaKnown RBP20.49■□□□□ 0.87
SNF8-213ENST00000514929 DCDC5Q6ZRR9 648 aa20.49■□□□□ 0.87
SNF8-213ENST00000514929 BPIFB2Q8N4F0 458 aa20.49■□□□□ 0.87
SNF8-213ENST00000514929 BOLLQ8N9W6 283 aaKnown RBP20.49■□□□□ 0.87
SNF8-213ENST00000514929 C19orf18Q8NEA5 215 aa20.49■□□□□ 0.87
SNF8-213ENST00000514929 PRRG3Q9BZD7 231 aa20.49■□□□□ 0.87
SNF8-213ENST00000514929 KRT84Q9NSB2 600 aa20.49■□□□□ 0.87
SNF8-213ENST00000514929 LAMP5Q9UJQ1 280 aa20.49■□□□□ 0.87
SNF8-213ENST00000514929 KLHDC2Q9Y2U9 406 aa20.49■□□□□ 0.87
SNF8-213ENST00000514929 AP4S1Q9Y587 144 aa20.49■□□□□ 0.87
SNF8-213ENST00000514929 hCG_38984A0A1B0GV85 526 aa20.48■□□□□ 0.87
SNF8-213ENST00000514929 A6NLC8 198 aa20.48■□□□□ 0.87
SNF8-213ENST00000514929 FSHBP01225 129 aa20.48■□□□□ 0.87
SNF8-213ENST00000514929 PITPNBP48739 271 aa20.48■□□□□ 0.87
SNF8-213ENST00000514929 ESRRGP62508 458 aa20.48■□□□□ 0.87
SNF8-213ENST00000514929 ARMCX4Q5H9R4 360 aa20.48■□□□□ 0.87
SNF8-213ENST00000514929 LRRN1Q6UXK5 716 aa20.48■□□□□ 0.87
SNF8-213ENST00000514929 C1orf123Q9NWV4 160 aa20.48■□□□□ 0.87
SNF8-213ENST00000514929 ZNF319Q9P2F9 582 aa20.48■□□□□ 0.87
SNF8-213ENST00000514929 FPR2P25090 351 aa20.47■□□□□ 0.87
SNF8-213ENST00000514929 GSK3AP49840 483 aa20.47■□□□□ 0.87
SNF8-213ENST00000514929 KCNJ8Q15842 424 aa20.47■□□□□ 0.87
SNF8-213ENST00000514929 LCN1P1Q5VSP4 162 aa20.47■□□□□ 0.87
SNF8-213ENST00000514929 LYPD2Q6UXB3 125 aa20.47■□□□□ 0.87
SNF8-213ENST00000514929 BTNL3Q6UXE8 466 aa20.47■□□□□ 0.87
SNF8-213ENST00000514929 KRT77Q7Z794 578 aa20.47■□□□□ 0.87
SNF8-213ENST00000514929 ZDHHC13Q8IUH4 622 aa20.47■□□□□ 0.87
SNF8-213ENST00000514929 SEMA6DQ8NFY4 1073 aa20.47■□□□□ 0.87
SNF8-213ENST00000514929 TEAD3Q99594 435 aa20.47■□□□□ 0.87
SNF8-213ENST00000514929 SLC6A7Q99884 636 aa20.47■□□□□ 0.87
SNF8-213ENST00000514929 SUCNR1Q9BXA5 334 aa20.47■□□□□ 0.87
SNF8-213ENST00000514929 RGCCQ9H4X1 137 aa20.47■□□□□ 0.87
SNF8-213ENST00000514929 NIPAL2Q9H841 368 aa20.47■□□□□ 0.87
SNF8-213ENST00000514929 CLN8Q9UBY8 286 aa20.47■□□□□ 0.87
SNF8-213ENST00000514929 hCG_1807616A0A1W2PRN6 198 aa20.46■□□□□ 0.87
SNF8-213ENST00000514929 MRPL3P09001 348 aaKnown RBP20.46■□□□□ 0.87
SNF8-213ENST00000514929 FCGR1AP12314 374 aa20.46■□□□□ 0.87
SNF8-213ENST00000514929 ALOX5APP20292 161 aa20.46■□□□□ 0.87
SNF8-213ENST00000514929 CD80P33681 288 aa20.46■□□□□ 0.87
SNF8-213ENST00000514929 GNALP38405 381 aa20.46■□□□□ 0.87
SNF8-213ENST00000514929 HCCSP53701 268 aa20.46■□□□□ 0.87
SNF8-213ENST00000514929 HILS1P60008 231 aa20.46■□□□□ 0.87
SNF8-213ENST00000514929 HOXA4Q00056 320 aaPredicted RBP20.46■□□□□ 0.87
SNF8-213ENST00000514929 OR8B8Q15620 311 aa20.46■□□□□ 0.87
SNF8-213ENST00000514929 SNCBQ16143 134 aa20.46■□□□□ 0.87
SNF8-213ENST00000514929 SFRP4Q6FHJ7 346 aaPredicted RBP20.46■□□□□ 0.87
SNF8-213ENST00000514929 USP43Q70EL4 1123 aa20.46■□□□□ 0.87
SNF8-213ENST00000514929 CSNK2A3Q8NEV1 391 aa20.46■□□□□ 0.87
SNF8-213ENST00000514929 C22orf15Q8WYQ4 148 aa20.46■□□□□ 0.87
SNF8-213ENST00000514929 JMJD8Q96S16 334 aa20.46■□□□□ 0.87
SNF8-213ENST00000514929 YIPF3Q9GZM5 350 aa20.46■□□□□ 0.87
SNF8-213ENST00000514929 C3orf80F5H4A9 247 aa20.45■□□□□ 0.86
SNF8-213ENST00000514929 LGALS8O00214 317 aa20.45■□□□□ 0.86
SNF8-213ENST00000514929 MITFO75030 526 aaPredicted RBP20.45■□□□□ 0.86
SNF8-213ENST00000514929 CIB2O75838 187 aa20.45■□□□□ 0.86
SNF8-213ENST00000514929 PSMA6P60900 246 aaKnown RBP20.45■□□□□ 0.86
SNF8-213ENST00000514929 KCTD18Q6PI47 426 aaPredicted RBP20.45■□□□□ 0.86
SNF8-213ENST00000514929 ZNF826PQ6ZT77 177 aa20.45■□□□□ 0.86
SNF8-213ENST00000514929 AMIGO2Q86SJ2 522 aa20.45■□□□□ 0.86
SNF8-213ENST00000514929 FTMTQ8N4E7 242 aa20.45■□□□□ 0.86
SNF8-213ENST00000514929 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP20.45■□□□□ 0.86
SNF8-213ENST00000514929 RAB40AQ8WXH6 277 aa20.45■□□□□ 0.86
SNF8-213ENST00000514929 PAPOLGQ9BWT3 736 aaKnown RBP20.45■□□□□ 0.86
SNF8-213ENST00000514929 TRIM36Q9NQ86 728 aa20.45■□□□□ 0.86
SNF8-213ENST00000514929 LRP12Q9Y561 859 aa20.45■□□□□ 0.86
SNF8-213ENST00000514929 CCDC182A6NF36 153 aa20.44■□□□□ 0.86
SNF8-213ENST00000514929 PRKYO43930 277 aa20.44■□□□□ 0.86
SNF8-213ENST00000514929 PAX2Q02962 417 aa20.44■□□□□ 0.86
SNF8-213ENST00000514929 ZFAND2BQ8WV99 257 aa20.44■□□□□ 0.86
SNF8-213ENST00000514929 LRTOMTQ8WZ04 291 aa20.44■□□□□ 0.86
SNF8-213ENST00000514929 DUS3LQ96G46 650 aaKnown RBP20.44■□□□□ 0.86
SNF8-213ENST00000514929 NUP50Q9UKX7 468 aa20.44■□□□□ 0.86
SNF8-213ENST00000514929 RHBDD3Q9Y3P4 386 aa20.44■□□□□ 0.86
SNF8-213ENST00000514929 TRAV38-1A0A0B4J264 116 aa20.43■□□□□ 0.86
SNF8-213ENST00000514929 IGHV2-70DA0A0C4DH43 119 aa20.43■□□□□ 0.86
SNF8-213ENST00000514929 OOEPA6NGQ2 149 aa20.43■□□□□ 0.86
SNF8-213ENST00000514929 PHYHO14832 338 aa20.43■□□□□ 0.86
SNF8-213ENST00000514929 PSMB10P40306 273 aa20.43■□□□□ 0.86
SNF8-213ENST00000514929 PAX8Q06710 450 aa20.43■□□□□ 0.86
SNF8-213ENST00000514929 WDR25Q64LD2 544 aaPredicted RBP20.43■□□□□ 0.86
SNF8-213ENST00000514929 OR8B12Q8NGG6 310 aa20.43■□□□□ 0.86
SNF8-213ENST00000514929 GABARAPL1Q9H0R8 117 aa20.43■□□□□ 0.86
SNF8-213ENST00000514929 H2AFY2Q9P0M6 372 aaPredicted RBP20.43■□□□□ 0.86
SNF8-213ENST00000514929 ENOPH1Q9UHY7 261 aa20.43■□□□□ 0.86
SNF8-213ENST00000514929 TMEM14AQ9Y6G1 99 aa20.43■□□□□ 0.86
SNF8-213ENST00000514929 ANXA2P2A6NMY6 339 aa20.42■□□□□ 0.86
SNF8-213ENST00000514929 TRIM77I1YAP6 450 aa20.42■□□□□ 0.86
SNF8-213ENST00000514929 M0R129 80 aa20.42■□□□□ 0.86
SNF8-213ENST00000514929 PSMD9O00233 223 aa20.42■□□□□ 0.86
SNF8-213ENST00000514929 SLX4IPQ5VYV7 408 aa20.42■□□□□ 0.86
SNF8-213ENST00000514929 KDM4DQ6B0I6 523 aa20.42■□□□□ 0.86
SNF8-213ENST00000514929 DEGS2Q6QHC5 323 aa20.42■□□□□ 0.86
SNF8-213ENST00000514929 WDR86Q86TI4 376 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms