RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 ERICH4A6NGS2 130 aa3.55□□□□□ -1.84
RFC1-216ENST00000514572 GJE1A6NN92 205 aa3.55□□□□□ -1.84
RFC1-216ENST00000514572 PAHP00439 452 aa3.55□□□□□ -1.84
RFC1-216ENST00000514572 KLK1P06870 262 aa3.55□□□□□ -1.84
RFC1-216ENST00000514572 PTNP21246 168 aa3.55□□□□□ -1.84
RFC1-216ENST00000514572 ZBTB25P24278 435 aa3.55□□□□□ -1.84
RFC1-216ENST00000514572 RFC3P40938 356 aa3.55□□□□□ -1.84
RFC1-216ENST00000514572 GPR1P46091 355 aa3.55□□□□□ -1.84
RFC1-216ENST00000514572 ATP6V0D1P61421 351 aa3.55□□□□□ -1.84
RFC1-216ENST00000514572 PRR3P79522 188 aaKnown RBP3.55□□□□□ -1.84
RFC1-216ENST00000514572 SEMG2Q02383 582 aa3.55□□□□□ -1.84
RFC1-216ENST00000514572 ORC2Q13416 577 aaPredicted RBP3.55□□□□□ -1.84
RFC1-216ENST00000514572 ZNF239Q16600 458 aaKnown RBP3.55□□□□□ -1.84
RFC1-216ENST00000514572 TMEM255AQ5JRV8 349 aa3.55□□□□□ -1.84
RFC1-216ENST00000514572 COA6Q5JTJ3 125 aaKnown RBP3.55□□□□□ -1.84
RFC1-216ENST00000514572 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.55□□□□□ -1.84
RFC1-216ENST00000514572 LYPD2Q6UXB3 125 aa3.55□□□□□ -1.84
RFC1-216ENST00000514572 H2AFVQ71UI9 128 aa3.55□□□□□ -1.84
RFC1-216ENST00000514572 ZBED8Q8IZ13 594 aa3.55□□□□□ -1.84
RFC1-216ENST00000514572 MYOCDQ8IZQ8 938 aa3.55□□□□□ -1.84
RFC1-216ENST00000514572 TRAM1L1Q8N609 369 aa3.55□□□□□ -1.84
RFC1-216ENST00000514572 FAM86B1Q8N7N1 296 aa3.55□□□□□ -1.84
RFC1-216ENST00000514572 ZFP41Q8N8Y5 198 aa3.55□□□□□ -1.84
RFC1-216ENST00000514572 FBXO36Q8NEA4 188 aa3.55□□□□□ -1.84
RFC1-216ENST00000514572 OR13C9Q8NGT0 318 aa3.55□□□□□ -1.84
RFC1-216ENST00000514572 EEF1AKMT3Q96AZ1 226 aa3.55□□□□□ -1.84
RFC1-216ENST00000514572 TMIGD2Q96BF3 282 aa3.55□□□□□ -1.84
RFC1-216ENST00000514572 SEH1LQ96EE3 360 aa3.55□□□□□ -1.84
RFC1-216ENST00000514572 IMMP1LQ96LU5 166 aa3.55□□□□□ -1.84
RFC1-216ENST00000514572 TSSK3Q96PN8 268 aa3.55□□□□□ -1.84
RFC1-216ENST00000514572 OR2M2Q96R28 347 aa3.55□□□□□ -1.84
RFC1-216ENST00000514572 PATZ1Q9HBE1 687 aaKnown RBP3.55□□□□□ -1.84
RFC1-216ENST00000514572 SLCO1B3Q9NPD5 702 aa3.55□□□□□ -1.84
RFC1-216ENST00000514572 ZC4H2Q9NQZ6 224 aa3.55□□□□□ -1.84
RFC1-216ENST00000514572 BZW2Q9Y6E2 419 aaKnown RBP3.55□□□□□ -1.84
RFC1-216ENST00000514572 RALGAPA2Q2PPJ7 1873 aa3.55□□□□□ -1.84
RFC1-216ENST00000514572 KMT2BQ9UMN6 2715 aaPredicted RBP3.55□□□□□ -1.84
RFC1-216ENST00000514572 ZFYVE26Q68DK2 2539 aa3.54□□□□□ -1.84
RFC1-216ENST00000514572 FLNBO75369 2602 aaKnown RBP3.54□□□□□ -1.84
RFC1-216ENST00000514572 LOC100653049A0A140TA62 436 aa3.54□□□□□ -1.84
RFC1-216ENST00000514572 XRCC2O43543 280 aa3.54□□□□□ -1.84
RFC1-216ENST00000514572 GMDSO60547 372 aa3.54□□□□□ -1.84
RFC1-216ENST00000514572 KRT34O76011 436 aa3.54□□□□□ -1.84
RFC1-216ENST00000514572 IGLV2-23P01705 113 aa3.54□□□□□ -1.84
RFC1-216ENST00000514572 BGLAPP02818 100 aa3.54□□□□□ -1.84
RFC1-216ENST00000514572 KRT16P08779 473 aa3.54□□□□□ -1.84
RFC1-216ENST00000514572 OR5H8P0DN80 308 aa3.54□□□□□ -1.84
RFC1-216ENST00000514572 IL9P15248 144 aa3.54□□□□□ -1.84
RFC1-216ENST00000514572 ZNF30P17039 623 aa3.54□□□□□ -1.84
RFC1-216ENST00000514572 ATF6P18850 670 aa3.54□□□□□ -1.84
RFC1-216ENST00000514572 CSNK2A2P19784 350 aaPredicted RBP3.54□□□□□ -1.84
RFC1-216ENST00000514572 PMCHP20382 165 aa3.54□□□□□ -1.84
RFC1-216ENST00000514572 ZNF138P52744 262 aa3.54□□□□□ -1.84
RFC1-216ENST00000514572 PSMD4P55036 377 aaKnown RBP3.54□□□□□ -1.84
RFC1-216ENST00000514572 SLAQ13239 276 aa3.54□□□□□ -1.84
RFC1-216ENST00000514572 TSC22D1Q15714 1073 aa3.54□□□□□ -1.84
RFC1-216ENST00000514572 FAM83EQ2M2I3 478 aa3.54□□□□□ -1.84
RFC1-216ENST00000514572 RFX4Q33E94 735 aa3.54□□□□□ -1.84
RFC1-216ENST00000514572 ZNF829Q3KNS6 432 aaPredicted RBP3.54□□□□□ -1.84
RFC1-216ENST00000514572 ZNF621Q6ZSS3 439 aa3.54□□□□□ -1.84
RFC1-216ENST00000514572 MBOAT2Q6ZWT7 520 aa3.54□□□□□ -1.84
RFC1-216ENST00000514572 NPWQ8N729 165 aa3.54□□□□□ -1.84
RFC1-216ENST00000514572 SPERTQ8NA61 448 aa3.54□□□□□ -1.84
RFC1-216ENST00000514572 TMEM104Q8NE00 496 aa3.54□□□□□ -1.84
RFC1-216ENST00000514572 OR4S2Q8NH73 311 aa3.54□□□□□ -1.84
RFC1-216ENST00000514572 MCOLN3Q8TDD5 553 aa3.54□□□□□ -1.84
RFC1-216ENST00000514572 ISOC2Q96AB3 205 aa3.54□□□□□ -1.84
RFC1-216ENST00000514572 RPEQ96AT9 228 aa3.54□□□□□ -1.84
RFC1-216ENST00000514572 FAM3DQ96BQ1 224 aa3.54□□□□□ -1.84
RFC1-216ENST00000514572 FOXC2Q99958 501 aa3.54□□□□□ -1.84
RFC1-216ENST00000514572 TMEM9BQ9NQ34 198 aa3.54□□□□□ -1.84
RFC1-216ENST00000514572 SLC25A37Q9NYZ2 338 aa3.54□□□□□ -1.84
RFC1-216ENST00000514572 ZNF629Q9UEG4 869 aaPredicted RBP3.54□□□□□ -1.84
RFC1-216ENST00000514572 KPTNQ9Y664 436 aa3.54□□□□□ -1.84
RFC1-216ENST00000514572 MRPS18BQ9Y676 258 aaKnown RBP3.54□□□□□ -1.84
RFC1-216ENST00000514572 USP24Q9UPU5 2620 aa3.54□□□□□ -1.84
RFC1-216ENST00000514572 GPR179Q6PRD1 2367 aa3.53□□□□□ -1.84
RFC1-216ENST00000514572 ZBED9Q6R2W3 1325 aa3.53□□□□□ -1.84
RFC1-216ENST00000514572 LCTP09848 1927 aa3.53□□□□□ -1.84
RFC1-216ENST00000514572 XKRYO14609 159 aa3.53□□□□□ -1.84
RFC1-216ENST00000514572 POLR1CO15160 346 aaPredicted RBP3.53□□□□□ -1.84
RFC1-216ENST00000514572 LY6G6DO95868 133 aa3.53□□□□□ -1.84
RFC1-216ENST00000514572 INSP01308 110 aa3.53□□□□□ -1.84
RFC1-216ENST00000514572 GNAO1P09471 354 aa3.53□□□□□ -1.84
RFC1-216ENST00000514572 ZDHHC11BP0C7U3 371 aa3.53□□□□□ -1.84
RFC1-216ENST00000514572 CALM1P0DP23 149 aa3.53□□□□□ -1.84
RFC1-216ENST00000514572 CALM2P0DP24 149 aa3.53□□□□□ -1.84
RFC1-216ENST00000514572 CALM3P0DP25 149 aa3.53□□□□□ -1.84
RFC1-216ENST00000514572 MAS1LP35410 378 aa3.53□□□□□ -1.84
RFC1-216ENST00000514572 CSKP41240 450 aa3.53□□□□□ -1.84
RFC1-216ENST00000514572 CRISP3P54108 245 aa3.53□□□□□ -1.84
RFC1-216ENST00000514572 DEFB103AP81534 67 aa3.53□□□□□ -1.84
RFC1-216ENST00000514572 SLC7A9P82251 487 aa3.53□□□□□ -1.84
RFC1-216ENST00000514572 STK38Q15208 465 aa3.53□□□□□ -1.84
RFC1-216ENST00000514572 PSG5Q15238 335 aa3.53□□□□□ -1.84
RFC1-216ENST00000514572 STK11Q15831 433 aa3.53□□□□□ -1.84
RFC1-216ENST00000514572 TTLL9Q3SXZ7 439 aa3.53□□□□□ -1.84
RFC1-216ENST00000514572 ZBED5Q49AG3 693 aa3.53□□□□□ -1.84
RFC1-216ENST00000514572 HSP90AA4PQ58FG1 418 aa3.53□□□□□ -1.84
RFC1-216ENST00000514572 TCEAL5Q5H9L2 206 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms