RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 R4GMQ9 66 aa11.8□□□□□ -0.52
USP46-209ENST00000514536 LOC110117498-PIK3R3F6TDL0 507 aa11.79□□□□□ -0.52
USP46-209ENST00000514536 H0YAE9 185 aa11.79□□□□□ -0.52
USP46-209ENST00000514536 HAX1O00165 279 aa11.79□□□□□ -0.52
USP46-209ENST00000514536 GMDSO60547 372 aa11.79□□□□□ -0.52
USP46-209ENST00000514536 SULT1C4O75897 302 aa11.79□□□□□ -0.52
USP46-209ENST00000514536 TACSTD2P09758 323 aa11.79□□□□□ -0.52
USP46-209ENST00000514536 ACTC1P68032 377 aa11.79□□□□□ -0.52
USP46-209ENST00000514536 ACTA1P68133 377 aa11.79□□□□□ -0.52
USP46-209ENST00000514536 MAB21L1Q13394 359 aa11.79□□□□□ -0.52
USP46-209ENST00000514536 TMEM249Q2WGJ8 235 aa11.79□□□□□ -0.52
USP46-209ENST00000514536 TP53I3Q53FA7 332 aa11.79□□□□□ -0.52
USP46-209ENST00000514536 LIPNQ5VXI9 398 aa11.79□□□□□ -0.52
USP46-209ENST00000514536 ACBD7Q8N6N7 88 aa11.79□□□□□ -0.52
USP46-209ENST00000514536 SETD9Q8NE22 299 aa11.79□□□□□ -0.52
USP46-209ENST00000514536 NARFLQ9H6Q4 476 aa11.79□□□□□ -0.52
USP46-209ENST00000514536 GCM1Q9NP62 436 aa11.79□□□□□ -0.52
USP46-209ENST00000514536 G6PC2Q9NQR9 355 aa11.79□□□□□ -0.52
USP46-209ENST00000514536 TMEM106BQ9NUM4 274 aa11.79□□□□□ -0.52
USP46-209ENST00000514536 NUFIP1Q9UHK0 495 aaKnown RBP11.79□□□□□ -0.52
USP46-209ENST00000514536 GNG8Q9UK08 70 aa11.79□□□□□ -0.52
USP46-209ENST00000514536 OR52A1Q9UKL2 312 aa11.79□□□□□ -0.52
USP46-209ENST00000514536 SLC22A13Q9Y226 551 aa11.79□□□□□ -0.52
USP46-209ENST00000514536 SNX5Q9Y5X3 404 aa11.79□□□□□ -0.52
USP46-209ENST00000514536 VPS13CQ709C8 3753 aa11.79□□□□□ -0.52
USP46-209ENST00000514536 A0A0U1RQV5 110 aa11.79□□□□□ -0.52
USP46-209ENST00000514536 CLDN25C9JDP6 229 aa11.79□□□□□ -0.52
USP46-209ENST00000514536 WNT9BO14905 357 aa11.79□□□□□ -0.52
USP46-209ENST00000514536 TTRP02766 147 aa11.79□□□□□ -0.52
USP46-209ENST00000514536 GNAO1P09471 354 aa11.79□□□□□ -0.52
USP46-209ENST00000514536 HOXB4P17483 251 aaPredicted RBP11.79□□□□□ -0.52
USP46-209ENST00000514536 ACKR3P25106 362 aa11.79□□□□□ -0.52
USP46-209ENST00000514536 CHN2P52757 468 aa11.79□□□□□ -0.52
USP46-209ENST00000514536 ISL1P61371 349 aa11.79□□□□□ -0.52
USP46-209ENST00000514536 KRTAP1-1Q07627 177 aa11.79□□□□□ -0.52
USP46-209ENST00000514536 OR8B8Q15620 311 aa11.79□□□□□ -0.52
USP46-209ENST00000514536 LHFPL3Q86UP9 236 aa11.79□□□□□ -0.52
USP46-209ENST00000514536 MOGAT3Q86VF5 341 aa11.79□□□□□ -0.52
USP46-209ENST00000514536 COMMD2Q86X83 199 aa11.79□□□□□ -0.52
USP46-209ENST00000514536 CSNK2A3Q8NEV1 391 aa11.79□□□□□ -0.52
USP46-209ENST00000514536 ZNF420Q8TAQ5 688 aaPredicted RBP11.79□□□□□ -0.52
USP46-209ENST00000514536 OR51E1Q8TCB6 317 aa11.79□□□□□ -0.52
USP46-209ENST00000514536 RAB1CQ92928 201 aa11.79□□□□□ -0.52
USP46-209ENST00000514536 ADAT1Q9BUB4 502 aaKnown RBP11.79□□□□□ -0.52
USP46-209ENST00000514536 PPP1R3EQ9H7J1 279 aa11.79□□□□□ -0.52
USP46-209ENST00000514536 GPR84Q9NQS5 396 aa11.79□□□□□ -0.52
USP46-209ENST00000514536 MRPS18AQ9NVS2 196 aaKnown RBP11.79□□□□□ -0.52
USP46-209ENST00000514536 ZNF391Q9UJN7 358 aa11.79□□□□□ -0.52
USP46-209ENST00000514536 MYRFQ9Y2G1 1151 aa11.79□□□□□ -0.52
USP46-209ENST00000514536 NOP16Q9Y3C1 178 aaKnown RBP11.79□□□□□ -0.52
USP46-209ENST00000514536 RHBDD3Q9Y3P4 386 aa11.79□□□□□ -0.52
USP46-209ENST00000514536 CHD3Q12873 2000 aaKnown RBP11.78□□□□□ -0.52
USP46-209ENST00000514536 NIPBLQ6KC79 2804 aaeCLIP11.78□□□□□ -0.52
USP46-209ENST00000514536 FADS2O95864 444 aaKnown RBP11.78□□□□□ -0.52
USP46-209ENST00000514536 HEXAP06865 529 aa11.78□□□□□ -0.52
USP46-209ENST00000514536 IL2RGP31785 369 aa11.78□□□□□ -0.52
USP46-209ENST00000514536 PSMB10P40306 273 aa11.78□□□□□ -0.52
USP46-209ENST00000514536 CD200P41217 278 aa11.78□□□□□ -0.52
USP46-209ENST00000514536 SLC3A1Q07837 685 aa11.78□□□□□ -0.52
USP46-209ENST00000514536 RAB40BQ12829 278 aa11.78□□□□□ -0.52
USP46-209ENST00000514536 IL18R1Q13478 541 aa11.78□□□□□ -0.52
USP46-209ENST00000514536 KLHL22Q53GT1 634 aa11.78□□□□□ -0.52
USP46-209ENST00000514536 BCL2L15Q5TBC7 163 aa11.78□□□□□ -0.52
USP46-209ENST00000514536 ELMOD2Q8IZ81 293 aa11.78□□□□□ -0.52
USP46-209ENST00000514536 OR52I1Q8NGK6 324 aa11.78□□□□□ -0.52
USP46-209ENST00000514536 RORBQ92753 470 aa11.78□□□□□ -0.52
USP46-209ENST00000514536 TIMD4Q96H15 378 aa11.78□□□□□ -0.52
USP46-209ENST00000514536 FAM71F1Q96KD3 344 aaPredicted RBP11.78□□□□□ -0.52
USP46-209ENST00000514536 PAPOLGQ9BWT3 736 aaKnown RBP11.78□□□□□ -0.52
USP46-209ENST00000514536 WIPI2Q9Y4P8 454 aa11.78□□□□□ -0.52
USP46-209ENST00000514536 CSPG4Q6UVK1 2322 aa11.77□□□□□ -0.52
USP46-209ENST00000514536 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.77□□□□□ -0.53
USP46-209ENST00000514536 J3QLW9 94 aa11.77□□□□□ -0.53
USP46-209ENST00000514536 FAM20BO75063 409 aa11.77□□□□□ -0.53
USP46-209ENST00000514536 IGHV4-31P0DP07 118 aa11.77□□□□□ -0.53
USP46-209ENST00000514536 ZNF19P17023 458 aa11.77□□□□□ -0.53
USP46-209ENST00000514536 GNALP38405 381 aa11.77□□□□□ -0.53
USP46-209ENST00000514536 PMELP40967 661 aa11.77□□□□□ -0.53
USP46-209ENST00000514536 MAP2K3P46734 347 aa11.77□□□□□ -0.53
USP46-209ENST00000514536 AQP4P55087 323 aa11.77□□□□□ -0.53
USP46-209ENST00000514536 OR12D2P58182 307 aa11.77□□□□□ -0.53
USP46-209ENST00000514536 ODF4Q2M2E3 257 aa11.77□□□□□ -0.53
USP46-209ENST00000514536 CDONQ4KMG0 1287 aa11.77□□□□□ -0.53
USP46-209ENST00000514536 PRAMEF6Q5VXH4 476 aa11.77□□□□□ -0.53
USP46-209ENST00000514536 CYB5R2Q6BCY4 276 aa11.77□□□□□ -0.53
USP46-209ENST00000514536 FAM220AQ7Z4H9 259 aa11.77□□□□□ -0.53
USP46-209ENST00000514536 KCTD20Q7Z5Y7 419 aa11.77□□□□□ -0.53
USP46-209ENST00000514536 PEG10Q86TG7 708 aaKnown RBP11.77□□□□□ -0.53
USP46-209ENST00000514536 CATSPERDQ86XM0 798 aa11.77□□□□□ -0.53
USP46-209ENST00000514536 KLBQ86Z14 1044 aa11.77□□□□□ -0.53
USP46-209ENST00000514536 C8orf59Q8N0T1 100 aaPredicted RBP11.77□□□□□ -0.53
USP46-209ENST00000514536 CELF2-AS1Q8N7Q2 184 aa11.77□□□□□ -0.53
USP46-209ENST00000514536 SPERTQ8NA61 448 aa11.77□□□□□ -0.53
USP46-209ENST00000514536 OR8S1Q8NH09 359 aa11.77□□□□□ -0.53
USP46-209ENST00000514536 CLDND2Q8NHS1 167 aa11.77□□□□□ -0.53
USP46-209ENST00000514536 PIGCQ92535 297 aa11.77□□□□□ -0.53
USP46-209ENST00000514536 TFAP2CQ92754 450 aa11.77□□□□□ -0.53
USP46-209ENST00000514536 MOB1AQ9H8S9 216 aa11.77□□□□□ -0.53
USP46-209ENST00000514536 UFSP2Q9NUQ7 469 aa11.77□□□□□ -0.53
USP46-209ENST00000514536 ACOXLQ9NUZ1 547 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms