RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 TIMM8AO60220 97 aaPredicted RBP8.72□□□□□ -1.01
NEDD9-214ENST00000513989 IGHV3-13P01766 116 aa8.72□□□□□ -1.01
NEDD9-214ENST00000513989 ZNF250P15622 560 aa8.72□□□□□ -1.01
NEDD9-214ENST00000513989 CPEP16870 476 aa8.72□□□□□ -1.01
NEDD9-214ENST00000513989 ACHEP22303 614 aa8.72□□□□□ -1.01
NEDD9-214ENST00000513989 ZNF92Q03936 586 aa8.72□□□□□ -1.01
NEDD9-214ENST00000513989 MFGE8Q08431 387 aaPredicted RBP8.72□□□□□ -1.01
NEDD9-214ENST00000513989 MZT1Q08AG7 82 aa8.72□□□□□ -1.01
NEDD9-214ENST00000513989 TPBGQ13641 420 aa8.72□□□□□ -1.01
NEDD9-214ENST00000513989 HLXQ14774 488 aaPredicted RBP8.72□□□□□ -1.01
NEDD9-214ENST00000513989 CDK5R1Q15078 307 aa8.72□□□□□ -1.01
NEDD9-214ENST00000513989 NEDD8Q15843 81 aa8.72□□□□□ -1.01
NEDD9-214ENST00000513989 ODF4Q2M2E3 257 aa8.72□□□□□ -1.01
NEDD9-214ENST00000513989 ZMAT1Q5H9K5 638 aa8.72□□□□□ -1.01
NEDD9-214ENST00000513989 DMKNQ6E0U4 476 aaPredicted RBP8.72□□□□□ -1.01
NEDD9-214ENST00000513989 RFPL4BQ6ZWI9 263 aa8.72□□□□□ -1.01
NEDD9-214ENST00000513989 TMEM200AQ86VY9 491 aa8.72□□□□□ -1.01
NEDD9-214ENST00000513989 MUC15Q8N387 334 aa8.72□□□□□ -1.01
NEDD9-214ENST00000513989 SEMA6DQ8NFY4 1073 aa8.72□□□□□ -1.01
NEDD9-214ENST00000513989 KBTBD8Q8NFY9 601 aa8.72□□□□□ -1.01
NEDD9-214ENST00000513989 GPR148Q8TDV2 347 aa8.72□□□□□ -1.01
NEDD9-214ENST00000513989 PPP1R14AQ96A00 147 aa8.72□□□□□ -1.01
NEDD9-214ENST00000513989 MRPL24Q96A35 216 aaKnown RBP8.72□□□□□ -1.01
NEDD9-214ENST00000513989 C10orf35Q96D05 121 aa8.72□□□□□ -1.01
NEDD9-214ENST00000513989 FAM71F1Q96KD3 344 aaPredicted RBP8.72□□□□□ -1.01
NEDD9-214ENST00000513989 HIST1H2AAQ96QV6 131 aa8.72□□□□□ -1.01
NEDD9-214ENST00000513989 SLC22A4Q9H015 551 aa8.72□□□□□ -1.01
NEDD9-214ENST00000513989 LIME1Q9H400 295 aa8.72□□□□□ -1.01
NEDD9-214ENST00000513989 PLEKHA1Q9HB21 404 aa8.72□□□□□ -1.01
NEDD9-214ENST00000513989 NEK6Q9HC98 313 aa8.72□□□□□ -1.01
NEDD9-214ENST00000513989 TMEM100Q9NV29 134 aa8.72□□□□□ -1.01
NEDD9-214ENST00000513989 CGGBP1Q9UFW8 167 aaPredicted RBP8.72□□□□□ -1.01
NEDD9-214ENST00000513989 DHDHQ9UQ10 334 aa8.72□□□□□ -1.01
NEDD9-214ENST00000513989 LSM2Q9Y333 95 aaKnown RBP8.72□□□□□ -1.01
NEDD9-214ENST00000513989 PNMA8CA0A1B0GUJ8 204 aa8.71□□□□□ -1.02
NEDD9-214ENST00000513989 TRIM64CA6NLI5 447 aa8.71□□□□□ -1.02
NEDD9-214ENST00000513989 CD300LBA8K4G0 201 aa8.71□□□□□ -1.02
NEDD9-214ENST00000513989 DHRS3O75911 302 aa8.71□□□□□ -1.02
NEDD9-214ENST00000513989 ZFPL1O95159 310 aa8.71□□□□□ -1.02
NEDD9-214ENST00000513989 PLAUP00749 431 aa8.71□□□□□ -1.02
NEDD9-214ENST00000513989 TTRP02766 147 aa8.71□□□□□ -1.02
NEDD9-214ENST00000513989 HLA-DPB1P04440 258 aa8.71□□□□□ -1.02
NEDD9-214ENST00000513989 CD2P06729 351 aa8.71□□□□□ -1.02
NEDD9-214ENST00000513989 ERCC1P07992 297 aaPredicted RBP8.71□□□□□ -1.02
NEDD9-214ENST00000513989 JUNBP17275 347 aaPredicted RBP8.71□□□□□ -1.02
NEDD9-214ENST00000513989 KITLGP21583 273 aa8.71□□□□□ -1.02
NEDD9-214ENST00000513989 LOXP28300 417 aaPredicted RBP8.71□□□□□ -1.02
NEDD9-214ENST00000513989 TTKP33981 857 aa8.71□□□□□ -1.02
NEDD9-214ENST00000513989 GSK3AP49840 483 aa8.71□□□□□ -1.02
NEDD9-214ENST00000513989 NANOS3P60323 173 aaKnown RBP8.71□□□□□ -1.02
NEDD9-214ENST00000513989 FAM3AP98173 230 aa8.71□□□□□ -1.02
NEDD9-214ENST00000513989 PSG7Q13046 419 aa8.71□□□□□ -1.02
NEDD9-214ENST00000513989 NKPD1Q17RQ9 610 aa8.71□□□□□ -1.02
NEDD9-214ENST00000513989 SYT6Q5T7P8 510 aaPredicted RBP8.71□□□□□ -1.02
NEDD9-214ENST00000513989 ZBTB37Q5TC79 503 aa8.71□□□□□ -1.02
NEDD9-214ENST00000513989 LIPKQ5VXJ0 399 aa8.71□□□□□ -1.02
NEDD9-214ENST00000513989 PAMR1Q6UXH9 720 aa8.71□□□□□ -1.02
NEDD9-214ENST00000513989 C20orf204Q6ZNR8 217 aa8.71□□□□□ -1.02
NEDD9-214ENST00000513989 RDH10Q8IZV5 341 aa8.71□□□□□ -1.02
NEDD9-214ENST00000513989 OR13C3Q8NGS6 347 aa8.71□□□□□ -1.02
NEDD9-214ENST00000513989 OR13G1Q8NGZ3 307 aa8.71□□□□□ -1.02
NEDD9-214ENST00000513989 OR2AE1Q8NHA4 323 aa8.71□□□□□ -1.02
NEDD9-214ENST00000513989 TSEN15Q8WW01 171 aaKnown RBP8.71□□□□□ -1.02
NEDD9-214ENST00000513989 HS3ST6Q96QI5 342 aa8.71□□□□□ -1.02
NEDD9-214ENST00000513989 PDCD1LG2Q9BQ51 273 aa8.71□□□□□ -1.02
NEDD9-214ENST00000513989 MS4A5Q9H3V2 200 aa8.71□□□□□ -1.02
NEDD9-214ENST00000513989 UBTD1Q9HAC8 227 aa8.71□□□□□ -1.02
NEDD9-214ENST00000513989 ABCB9Q9NP78 766 aa8.71□□□□□ -1.02
NEDD9-214ENST00000513989 MRPL15Q9P015 296 aaKnown RBP8.71□□□□□ -1.02
NEDD9-214ENST00000513989 TAAR3PQ9P1P4 343 aa8.71□□□□□ -1.02
NEDD9-214ENST00000513989 ZNF319Q9P2F9 582 aa8.71□□□□□ -1.02
NEDD9-214ENST00000513989 ST6GALNAC2Q9UJ37 374 aa8.71□□□□□ -1.02
NEDD9-214ENST00000513989 ENPP5Q9UJA9 477 aa8.71□□□□□ -1.02
NEDD9-214ENST00000513989 PURGQ9UJV8 347 aaKnown RBP8.71□□□□□ -1.02
NEDD9-214ENST00000513989 FZR1Q9UM11 496 aa8.71□□□□□ -1.02
NEDD9-214ENST00000513989 PMF1-BGLAPU3KQ54 211 aa8.71□□□□□ -1.02
NEDD9-214ENST00000513989 ROS1P08922 2347 aa8.71□□□□□ -1.02
NEDD9-214ENST00000513989 DNHD1Q96M86 4753 aa8.7□□□□□ -1.02
NEDD9-214ENST00000513989 LOC107986453A0A1B0GWG9 222 aa8.7□□□□□ -1.02
NEDD9-214ENST00000513989 INMTO95050 263 aa8.7□□□□□ -1.02
NEDD9-214ENST00000513989 OCM2P0CE71 109 aa8.7□□□□□ -1.02
NEDD9-214ENST00000513989 OCMP0CE72 109 aaPredicted RBP8.7□□□□□ -1.02
NEDD9-214ENST00000513989 ZNF20P17024 532 aa8.7□□□□□ -1.02
NEDD9-214ENST00000513989 CCL1P22362 96 aa8.7□□□□□ -1.02
NEDD9-214ENST00000513989 TNFSF4P23510 183 aa8.7□□□□□ -1.02
NEDD9-214ENST00000513989 MAPK3P27361 379 aaPredicted RBP8.7□□□□□ -1.02
NEDD9-214ENST00000513989 GNALP38405 381 aa8.7□□□□□ -1.02
NEDD9-214ENST00000513989 KIR3DL2P43630 455 aa8.7□□□□□ -1.02
NEDD9-214ENST00000513989 RPL5P46777 297 aaKnown RBP8.7□□□□□ -1.02
NEDD9-214ENST00000513989 ART1P52961 327 aa8.7□□□□□ -1.02
NEDD9-214ENST00000513989 ERVS71-1P61550 626 aa8.7□□□□□ -1.02
NEDD9-214ENST00000513989 SNRPD2P62316 118 aaKnown RBP8.7□□□□□ -1.02
NEDD9-214ENST00000513989 EFNB3Q15768 340 aa8.7□□□□□ -1.02
NEDD9-214ENST00000513989 ADIPOQQ15848 244 aa8.7□□□□□ -1.02
NEDD9-214ENST00000513989 TSTQ16762 297 aaKnown RBP8.7□□□□□ -1.02
NEDD9-214ENST00000513989 TIMM50Q3ZCQ8 353 aa8.7□□□□□ -1.02
NEDD9-214ENST00000513989 XAF1Q6GPH4 301 aa8.7□□□□□ -1.02
NEDD9-214ENST00000513989 OR2T2Q6IF00 324 aa8.7□□□□□ -1.02
NEDD9-214ENST00000513989 SERPINA12Q8IW75 414 aa8.7□□□□□ -1.02
NEDD9-214ENST00000513989 PHC2Q8IXK0 858 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms