RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 JAGN1Q8N5M9 183 aa7.3□□□□□ -1.24
RNF4-220ENST00000513578 CELF2-AS1Q8N7Q2 184 aa7.3□□□□□ -1.24
RNF4-220ENST00000513578 OR52N4Q8NGI2 321 aa7.3□□□□□ -1.24
RNF4-220ENST00000513578 OR4D6Q8NGJ1 314 aa7.3□□□□□ -1.24
RNF4-220ENST00000513578 FGFBP3Q8TAT2 258 aa7.3□□□□□ -1.24
RNF4-220ENST00000513578 WNT2BQ93097 391 aa7.3□□□□□ -1.24
RNF4-220ENST00000513578 CREB3L1Q96BA8 519 aa7.3□□□□□ -1.24
RNF4-220ENST00000513578 TECTBQ96PL2 329 aa7.3□□□□□ -1.24
RNF4-220ENST00000513578 CHST5Q9GZS9 411 aa7.3□□□□□ -1.24
RNF4-220ENST00000513578 CNTD2Q9H8S5 307 aa7.3□□□□□ -1.24
RNF4-220ENST00000513578 NEK6Q9HC98 313 aa7.3□□□□□ -1.24
RNF4-220ENST00000513578 TAS2R8Q9NYW2 309 aa7.3□□□□□ -1.24
RNF4-220ENST00000513578 MTFP1Q9UDX5 166 aa7.3□□□□□ -1.24
RNF4-220ENST00000513578 CGGBP1Q9UFW8 167 aaPredicted RBP7.3□□□□□ -1.24
RNF4-220ENST00000513578 ZNF107Q9UII5 783 aaPredicted RBP7.3□□□□□ -1.24
RNF4-220ENST00000513578 KLK13Q9UKR3 277 aa7.3□□□□□ -1.24
RNF4-220ENST00000513578 CLEC4AQ9UMR7 237 aa7.3□□□□□ -1.24
RNF4-220ENST00000513578 MRPS7Q9Y2R9 242 aaKnown RBP7.3□□□□□ -1.24
RNF4-220ENST00000513578 GTF3C1Q12789 2109 aa7.3□□□□□ -1.24
RNF4-220ENST00000513578 CEP250Q9BV73 2442 aa7.29□□□□□ -1.24
RNF4-220ENST00000513578 MEIOCA2RUB1 952 aa7.29□□□□□ -1.24
RNF4-220ENST00000513578 METTL21EPA6NDL7 271 aa7.29□□□□□ -1.24
RNF4-220ENST00000513578 SERPINA5P05154 406 aa7.29□□□□□ -1.24
RNF4-220ENST00000513578 CHRM2P08172 466 aa7.29□□□□□ -1.24
RNF4-220ENST00000513578 MELTFP08582 738 aa7.29□□□□□ -1.24
RNF4-220ENST00000513578 DBHP09172 617 aa7.29□□□□□ -1.24
RNF4-220ENST00000513578 CD3GP09693 182 aa7.29□□□□□ -1.24
RNF4-220ENST00000513578 NAT2P11245 290 aa7.29□□□□□ -1.24
RNF4-220ENST00000513578 BTCP35070 178 aa7.29□□□□□ -1.24
RNF4-220ENST00000513578 GDNFP39905 211 aa7.29□□□□□ -1.24
RNF4-220ENST00000513578 EFNB2P52799 333 aa7.29□□□□□ -1.24
RNF4-220ENST00000513578 RIPPLY1Q0D2K3 151 aa7.29□□□□□ -1.24
RNF4-220ENST00000513578 PLA2G7Q13093 441 aa7.29□□□□□ -1.24
RNF4-220ENST00000513578 MADCAM1Q13477 382 aa7.29□□□□□ -1.24
RNF4-220ENST00000513578 OR8B8Q15620 311 aa7.29□□□□□ -1.24
RNF4-220ENST00000513578 C3AR1Q16581 482 aa7.29□□□□□ -1.24
RNF4-220ENST00000513578 SNAI3Q3KNW1 292 aa7.29□□□□□ -1.24
RNF4-220ENST00000513578 PABPC1L2AQ5JQF8 200 aa7.29□□□□□ -1.24
RNF4-220ENST00000513578 TMEM42Q69YG0 159 aa7.29□□□□□ -1.24
RNF4-220ENST00000513578 OR2A2Q6IF42 318 aa7.29□□□□□ -1.24
RNF4-220ENST00000513578 TMEM53Q6P2H8 277 aa7.29□□□□□ -1.24
RNF4-220ENST00000513578 FAM214BQ7L5A3 538 aa7.29□□□□□ -1.24
RNF4-220ENST00000513578 BIVMQ86UB2 503 aa7.29□□□□□ -1.24
RNF4-220ENST00000513578 COMMD2Q86X83 199 aa7.29□□□□□ -1.24
RNF4-220ENST00000513578 PAQR4Q8N4S7 273 aaPredicted RBP7.29□□□□□ -1.24
RNF4-220ENST00000513578 DTX3Q8N9I9 347 aa7.29□□□□□ -1.24
RNF4-220ENST00000513578 SEMA6DQ8NFY4 1073 aa7.29□□□□□ -1.24
RNF4-220ENST00000513578 OR1K1Q8NGR3 316 aa7.29□□□□□ -1.24
RNF4-220ENST00000513578 OR13C9Q8NGT0 318 aa7.29□□□□□ -1.24
RNF4-220ENST00000513578 OR52I2Q8NH67 350 aa7.29□□□□□ -1.24
RNF4-220ENST00000513578 AKR7LQ8NHP1 331 aa7.29□□□□□ -1.24
RNF4-220ENST00000513578 GPX8Q8TED1 209 aa7.29□□□□□ -1.24
RNF4-220ENST00000513578 SLC7A6Q92536 515 aa7.29□□□□□ -1.24
RNF4-220ENST00000513578 AKAP1Q92667 903 aaKnown RBP eCLIP7.29□□□□□ -1.24
RNF4-220ENST00000513578 BCL2L2Q92843 193 aaPredicted RBP7.29□□□□□ -1.24
RNF4-220ENST00000513578 PHF21AQ96BD5 680 aa7.29□□□□□ -1.24
RNF4-220ENST00000513578 SPSB1Q96BD6 273 aa7.29□□□□□ -1.24
RNF4-220ENST00000513578 FAM71F1Q96KD3 344 aaPredicted RBP7.29□□□□□ -1.24
RNF4-220ENST00000513578 C1orf147Q96MC9 270 aaPredicted RBP7.29□□□□□ -1.24
RNF4-220ENST00000513578 SOX7Q9BT81 388 aa7.29□□□□□ -1.24
RNF4-220ENST00000513578 ACTR6Q9GZN1 396 aa7.29□□□□□ -1.24
RNF4-220ENST00000513578 DPAGT1Q9H3H5 408 aa7.29□□□□□ -1.24
RNF4-220ENST00000513578 OPA3Q9H6K4 179 aa7.29□□□□□ -1.24
RNF4-220ENST00000513578 B3GNT2Q9NY97 397 aa7.29□□□□□ -1.24
RNF4-220ENST00000513578 MSRB2Q9Y3D2 182 aa7.29□□□□□ -1.24
RNF4-220ENST00000513578 NUBP2Q9Y5Y2 271 aa7.29□□□□□ -1.24
RNF4-220ENST00000513578 RTTNQ86VV8 2226 aa7.29□□□□□ -1.24
RNF4-220ENST00000513578 WDFY3Q8IZQ1 3526 aa7.28□□□□□ -1.24
RNF4-220ENST00000513578 IGKV1-9A0A0C4DH69 117 aa7.28□□□□□ -1.24
RNF4-220ENST00000513578 hCG_38984A0A1B0GV85 526 aa7.28□□□□□ -1.24
RNF4-220ENST00000513578 LINC00854A0A1B0GVQ3 168 aa7.28□□□□□ -1.24
RNF4-220ENST00000513578 C5orf63A6NC05 138 aa7.28□□□□□ -1.24
RNF4-220ENST00000513578 HMX3A6NHT5 357 aa7.28□□□□□ -1.24
RNF4-220ENST00000513578 J3QW42 95 aa7.28□□□□□ -1.24
RNF4-220ENST00000513578 RAB27BO00194 218 aa7.28□□□□□ -1.24
RNF4-220ENST00000513578 ICMTO60725 284 aa7.28□□□□□ -1.24
RNF4-220ENST00000513578 RBBP9O75884 186 aa7.28□□□□□ -1.24
RNF4-220ENST00000513578 IL18BPO95998 194 aa7.28□□□□□ -1.24
RNF4-220ENST00000513578 CRYABP02511 175 aaKnown RBP7.28□□□□□ -1.24
RNF4-220ENST00000513578 LCATP04180 440 aa7.28□□□□□ -1.24
RNF4-220ENST00000513578 CRHP06850 196 aa7.28□□□□□ -1.24
RNF4-220ENST00000513578 HNRNPCP07910 306 aaKnown RBP eCLIP7.28□□□□□ -1.24
RNF4-220ENST00000513578 TMIGD3P0DMS9 266 aaPredicted RBP7.28□□□□□ -1.24
RNF4-220ENST00000513578 PRKACBP22694 351 aa7.28□□□□□ -1.24
RNF4-220ENST00000513578 PRSS3P35030 304 aa7.28□□□□□ -1.24
RNF4-220ENST00000513578 PTGER4P35408 488 aa7.28□□□□□ -1.24
RNF4-220ENST00000513578 HGFACQ04756 655 aa7.28□□□□□ -1.24
RNF4-220ENST00000513578 FAPQ12884 760 aa7.28□□□□□ -1.24
RNF4-220ENST00000513578 SNTB2Q13425 540 aaKnown RBP7.28□□□□□ -1.24
RNF4-220ENST00000513578 CNN3Q15417 329 aaKnown RBP7.28□□□□□ -1.24
RNF4-220ENST00000513578 EIF2S3LQ2VIR3 472 aaKnown RBP7.28□□□□□ -1.24
RNF4-220ENST00000513578 SFRP5Q5T4F7 317 aa7.28□□□□□ -1.24
RNF4-220ENST00000513578 CRIP3Q6Q6R5 217 aa7.28□□□□□ -1.24
RNF4-220ENST00000513578 ASCL4Q6XD76 172 aa7.28□□□□□ -1.24
RNF4-220ENST00000513578 P4HA3Q7Z4N8 544 aa7.28□□□□□ -1.24
RNF4-220ENST00000513578 IZUMO1Q8IYV9 350 aa7.28□□□□□ -1.24
RNF4-220ENST00000513578 PNLDC1Q8NA58 520 aaKnown RBP7.28□□□□□ -1.24
RNF4-220ENST00000513578 DRAXINQ8NBI3 349 aaPredicted RBP7.28□□□□□ -1.24
RNF4-220ENST00000513578 CPEB3Q8NE35 698 aaKnown RBP7.28□□□□□ -1.24
RNF4-220ENST00000513578 OR6K3Q8NGY3 331 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms