RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 DSPPQ9NZW4 1301 aa10.15□□□□□ -0.78
TCOF1-211ENST00000513346 C5orf67F2Z3F1 127 aa10.15□□□□□ -0.78
TCOF1-211ENST00000513346 DDAH2O95865 285 aa10.15□□□□□ -0.78
TCOF1-211ENST00000513346 CRHP06850 196 aa10.15□□□□□ -0.78
TCOF1-211ENST00000513346 GSTP1P09211 210 aaKnown RBP10.15□□□□□ -0.78
TCOF1-211ENST00000513346 SLC25A4P12235 298 aa10.15□□□□□ -0.78
TCOF1-211ENST00000513346 DAOP14920 347 aa10.15□□□□□ -0.78
TCOF1-211ENST00000513346 CCR5P51681 352 aa10.15□□□□□ -0.78
TCOF1-211ENST00000513346 IQCJQ1A5X6 159 aa10.15□□□□□ -0.78
TCOF1-211ENST00000513346 TMEM176BQ3YBM2 270 aaPredicted RBP10.15□□□□□ -0.78
TCOF1-211ENST00000513346 WDR34Q96EX3 536 aa10.15□□□□□ -0.78
TCOF1-211ENST00000513346 ZNF2Q9BSG1 426 aaPredicted RBP10.15□□□□□ -0.78
TCOF1-211ENST00000513346 SLCO1C1Q9NYB5 712 aa10.15□□□□□ -0.78
TCOF1-211ENST00000513346 POU2F2P09086 479 aa10.14□□□□□ -0.79
TCOF1-211ENST00000513346 RPL27P61353 136 aaKnown RBP10.14□□□□□ -0.79
TCOF1-211ENST00000513346 THSD4Q6ZMP0 1018 aa10.14□□□□□ -0.79
TCOF1-211ENST00000513346 NRIP2Q9BQI9 281 aa10.14□□□□□ -0.79
TCOF1-211ENST00000513346 NUDT9Q9BW91 350 aa10.14□□□□□ -0.79
TCOF1-211ENST00000513346 ADAM19Q9H013 955 aa10.14□□□□□ -0.79
TCOF1-211ENST00000513346 ALX4Q9H161 411 aaPredicted RBP10.14□□□□□ -0.79
TCOF1-211ENST00000513346 DAPP1Q9UN19 280 aa10.14□□□□□ -0.79
TCOF1-211ENST00000513346 A0A0A6YYD5 115 aa10.14□□□□□ -0.79
TCOF1-211ENST00000513346 GCM2O75603 506 aaPredicted RBP10.14□□□□□ -0.79
TCOF1-211ENST00000513346 PDGFBP01127 241 aaPredicted RBP10.14□□□□□ -0.79
TCOF1-211ENST00000513346 RAB32Q13637 225 aa10.14□□□□□ -0.79
TCOF1-211ENST00000513346 MELKQ14680 651 aa10.14□□□□□ -0.79
TCOF1-211ENST00000513346 C21orf62-AS1Q17RA5 79 aa10.14□□□□□ -0.79
TCOF1-211ENST00000513346 FAHD2BQ6P2I3 314 aaPredicted RBP10.14□□□□□ -0.79
TCOF1-211ENST00000513346 MED25Q71SY5 747 aa10.14□□□□□ -0.79
TCOF1-211ENST00000513346 TSLPQ969D9 159 aa10.14□□□□□ -0.79
TCOF1-211ENST00000513346 ALG14Q96F25 216 aa10.14□□□□□ -0.79
TCOF1-211ENST00000513346 FAHD2AQ96GK7 314 aa10.14□□□□□ -0.79
TCOF1-211ENST00000513346 GPA33Q99795 319 aa10.14□□□□□ -0.79
TCOF1-211ENST00000513346 SIRT3Q9NTG7 399 aaPredicted RBP10.14□□□□□ -0.79
TCOF1-211ENST00000513346 COA3Q9Y2R0 106 aaPredicted RBP10.14□□□□□ -0.79
TCOF1-211ENST00000513346 MDFIC2A0A1B0GVS7 189 aa10.14□□□□□ -0.79
TCOF1-211ENST00000513346 A0A1B0GX78 115 aa10.14□□□□□ -0.79
TCOF1-211ENST00000513346 OLFM2O95897 454 aa10.14□□□□□ -0.79
TCOF1-211ENST00000513346 MT-CO2P00403 227 aa10.14□□□□□ -0.79
TCOF1-211ENST00000513346 TCN2P20062 427 aa10.14□□□□□ -0.79
TCOF1-211ENST00000513346 LIMS1P48059 325 aa10.14□□□□□ -0.79
TCOF1-211ENST00000513346 SSR4P51571 173 aa10.14□□□□□ -0.79
TCOF1-211ENST00000513346 MTCP1P56278 107 aa10.14□□□□□ -0.79
TCOF1-211ENST00000513346 ATPAF1Q5TC12 328 aaPredicted RBP10.14□□□□□ -0.79
TCOF1-211ENST00000513346 RPL7L1Q6DKI1 246 aaKnown RBP10.14□□□□□ -0.79
TCOF1-211ENST00000513346 MARCH3Q86UD3 253 aa10.14□□□□□ -0.79
TCOF1-211ENST00000513346 CCL4L1Q8NHW4 92 aa10.14□□□□□ -0.79
TCOF1-211ENST00000513346 VPS25Q9BRG1 176 aa10.14□□□□□ -0.79
TCOF1-211ENST00000513346 TMEM9BQ9NQ34 198 aa10.14□□□□□ -0.79
TCOF1-211ENST00000513346 ZNF346Q9UL40 294 aaKnown RBP10.14□□□□□ -0.79
TCOF1-211ENST00000513346 SIRT4Q9Y6E7 314 aaPredicted RBP10.14□□□□□ -0.79
TCOF1-211ENST00000513346 TMEM272A0A1B0GTI8 110 aa10.14□□□□□ -0.79
TCOF1-211ENST00000513346 A0A1W2PPC4 97 aa10.14□□□□□ -0.79
TCOF1-211ENST00000513346 IGHG1P01857 330 aa10.14□□□□□ -0.79
TCOF1-211ENST00000513346 VSIG10L2P0DP72 767 aa10.14□□□□□ -0.79
TCOF1-211ENST00000513346 DPP4P27487 766 aa10.14□□□□□ -0.79
TCOF1-211ENST00000513346 NPBWR1P48145 328 aa10.14□□□□□ -0.79
TCOF1-211ENST00000513346 ZNF133P52736 654 aaPredicted RBP10.14□□□□□ -0.79
TCOF1-211ENST00000513346 RNF4P78317 190 aa10.14□□□□□ -0.79
TCOF1-211ENST00000513346 DCAF12L2Q5VW00 463 aa10.14□□□□□ -0.79
TCOF1-211ENST00000513346 SSX7Q7RTT5 188 aa10.14□□□□□ -0.79
TCOF1-211ENST00000513346 MRPL21Q7Z2W9 205 aaKnown RBP10.14□□□□□ -0.79
TCOF1-211ENST00000513346 ARIH2OSQ8N7S6 290 aa10.14□□□□□ -0.79
TCOF1-211ENST00000513346 GPR119Q8TDV5 335 aa10.14□□□□□ -0.79
TCOF1-211ENST00000513346 PIK3IP1Q96FE7 263 aa10.14□□□□□ -0.79
TCOF1-211ENST00000513346 UTP23Q9BRU9 249 aaKnown RBP10.14□□□□□ -0.79
TCOF1-211ENST00000513346 SLC5A6Q9Y289 635 aa10.14□□□□□ -0.79
TCOF1-211ENST00000513346 TNS1Q9HBL0 1735 aaKnown RBP10.14□□□□□ -0.79
TCOF1-211ENST00000513346 IDSB3KWA1 339 aa10.13□□□□□ -0.79
TCOF1-211ENST00000513346 CLDN34H7C241 214 aa10.13□□□□□ -0.79
TCOF1-211ENST00000513346 M0R143 59 aa10.13□□□□□ -0.79
TCOF1-211ENST00000513346 IRF2P14316 349 aa10.13□□□□□ -0.79
TCOF1-211ENST00000513346 AADACP22760 399 aa10.13□□□□□ -0.79
TCOF1-211ENST00000513346 CD1CP29017 333 aa10.13□□□□□ -0.79
TCOF1-211ENST00000513346 FASLGP48023 281 aa10.13□□□□□ -0.79
TCOF1-211ENST00000513346 SULT1A1P50225 295 aa10.13□□□□□ -0.79
TCOF1-211ENST00000513346 POLR2HP52434 150 aaKnown RBP10.13□□□□□ -0.79
TCOF1-211ENST00000513346 HSD17B7P56937 341 aa10.13□□□□□ -0.79
TCOF1-211ENST00000513346 CNEP1R1Q8N9A8 125 aa10.13□□□□□ -0.79
TCOF1-211ENST00000513346 SEMA6DQ8NFY4 1073 aa10.13□□□□□ -0.79
TCOF1-211ENST00000513346 OR5L1Q8NGL2 311 aa10.13□□□□□ -0.79
TCOF1-211ENST00000513346 MITD1Q8WV92 249 aa10.13□□□□□ -0.79
TCOF1-211ENST00000513346 ULBP2Q9BZM5 246 aa10.13□□□□□ -0.79
TCOF1-211ENST00000513346 PLEKHA3Q9HB20 300 aa10.13□□□□□ -0.79
TCOF1-211ENST00000513346 LAMP3Q9UQV4 416 aa10.13□□□□□ -0.79
TCOF1-211ENST00000513346 PRAMEF4O60810 478 aa10.13□□□□□ -0.79
TCOF1-211ENST00000513346 SFT2D2O95562 160 aa10.13□□□□□ -0.79
TCOF1-211ENST00000513346 MT-ATP6P00846 226 aa10.13□□□□□ -0.79
TCOF1-211ENST00000513346 ENPP1P22413 925 aa10.13□□□□□ -0.79
TCOF1-211ENST00000513346 APLNRP35414 380 aa10.13□□□□□ -0.79
TCOF1-211ENST00000513346 RRADP55042 308 aa10.13□□□□□ -0.79
TCOF1-211ENST00000513346 LSM11P83369 360 aaKnown RBP eCLIP10.13□□□□□ -0.79
TCOF1-211ENST00000513346 NKAIN1Q4KMZ8 207 aa10.13□□□□□ -0.79
TCOF1-211ENST00000513346 FAM210BQ96KR6 192 aa10.13□□□□□ -0.79
TCOF1-211ENST00000513346 LYRM4Q9HD34 91 aa10.13□□□□□ -0.79
TCOF1-211ENST00000513346 CHRNA9Q9UGM1 479 aa10.13□□□□□ -0.79
TCOF1-211ENST00000513346 KCNMB2Q9Y691 235 aa10.13□□□□□ -0.79
TCOF1-211ENST00000513346 ARGFXA6NJG6 315 aa10.13□□□□□ -0.79
TCOF1-211ENST00000513346 PLRG1O43660 514 aaKnown RBP10.13□□□□□ -0.79
TCOF1-211ENST00000513346 METTL15P1P0C7V9 234 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms