RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 VHLLQ6RSH7 139 aa10.75□□□□□ -0.69
PDPN-210ENST00000513143 TMEM91Q6ZNR0 172 aa10.75□□□□□ -0.69
PDPN-210ENST00000513143 KRT74Q7RTS7 529 aa10.75□□□□□ -0.69
PDPN-210ENST00000513143 SATL1Q86VE3 508 aa10.75□□□□□ -0.69
PDPN-210ENST00000513143 SEMA6DQ8NFY4 1073 aa10.75□□□□□ -0.69
PDPN-210ENST00000513143 SYNPRQ8TBG9 265 aa10.75□□□□□ -0.69
PDPN-210ENST00000513143 NEUROG1Q92886 237 aa10.75□□□□□ -0.69
PDPN-210ENST00000513143 FUNDC2Q9BWH2 189 aa10.75□□□□□ -0.69
PDPN-210ENST00000513143 ZNF275Q9NSD4 429 aaPredicted RBP10.75□□□□□ -0.69
PDPN-210ENST00000513143 STUB1Q9UNE7 303 aa10.75□□□□□ -0.69
PDPN-210ENST00000513143 CMAHPQ9Y471 501 aa10.75□□□□□ -0.69
PDPN-210ENST00000513143 UTP20O75691 2785 aaKnown RBP10.74□□□□□ -0.69
PDPN-210ENST00000513143 IGLV3-9A0A075B6K5 115 aa10.74□□□□□ -0.69
PDPN-210ENST00000513143 TRDV1A0A1B0GX56 115 aa10.74□□□□□ -0.69
PDPN-210ENST00000513143 GGT3PA6NGU5 568 aa10.74□□□□□ -0.69
PDPN-210ENST00000513143 CD300LBA8K4G0 201 aa10.74□□□□□ -0.69
PDPN-210ENST00000513143 VSTM5A8MXK1 200 aa10.74□□□□□ -0.69
PDPN-210ENST00000513143 ZNF879B4DU55 563 aa10.74□□□□□ -0.69
PDPN-210ENST00000513143 GABRPO00591 440 aa10.74□□□□□ -0.69
PDPN-210ENST00000513143 LMX1BO60663 402 aa10.74□□□□□ -0.69
PDPN-210ENST00000513143 GPX5O75715 221 aa10.74□□□□□ -0.69
PDPN-210ENST00000513143 GATBO75879 557 aaKnown RBP10.74□□□□□ -0.69
PDPN-210ENST00000513143 RGS9O75916 674 aaPredicted RBP10.74□□□□□ -0.69
PDPN-210ENST00000513143 OCM2P0CE71 109 aa10.74□□□□□ -0.69
PDPN-210ENST00000513143 COX6B1P14854 86 aa10.74□□□□□ -0.69
PDPN-210ENST00000513143 SELEP16581 610 aa10.74□□□□□ -0.69
PDPN-210ENST00000513143 KITLGP21583 273 aa10.74□□□□□ -0.69
PDPN-210ENST00000513143 GADD45AP24522 165 aa10.74□□□□□ -0.69
PDPN-210ENST00000513143 GCH1P30793 250 aa10.74□□□□□ -0.69
PDPN-210ENST00000513143 DDOSTP39656 456 aa10.74□□□□□ -0.69
PDPN-210ENST00000513143 FABP6P51161 128 aa10.74□□□□□ -0.69
PDPN-210ENST00000513143 PRSS12P56730 875 aa10.74□□□□□ -0.69
PDPN-210ENST00000513143 RIPPLY1Q0D2K3 151 aa10.74□□□□□ -0.69
PDPN-210ENST00000513143 INSL4Q14641 139 aa10.74□□□□□ -0.69
PDPN-210ENST00000513143 ADIPOQQ15848 244 aa10.74□□□□□ -0.69
PDPN-210ENST00000513143 ZBTB37Q5TC79 503 aa10.74□□□□□ -0.69
PDPN-210ENST00000513143 OR2T2Q6IF00 324 aa10.74□□□□□ -0.69
PDPN-210ENST00000513143 ANKRD13BQ86YJ7 626 aa10.74□□□□□ -0.69
PDPN-210ENST00000513143 OR56B2PQ8NGI1 322 aa10.74□□□□□ -0.69
PDPN-210ENST00000513143 OR13C3Q8NGS6 347 aa10.74□□□□□ -0.69
PDPN-210ENST00000513143 TSEN15Q8WW01 171 aaKnown RBP10.74□□□□□ -0.69
PDPN-210ENST00000513143 THRSPQ92748 146 aa10.74□□□□□ -0.69
PDPN-210ENST00000513143 MRPL24Q96A35 216 aaKnown RBP10.74□□□□□ -0.69
PDPN-210ENST00000513143 C10orf35Q96D05 121 aa10.74□□□□□ -0.69
PDPN-210ENST00000513143 OR14A2Q96R54 314 aa10.74□□□□□ -0.69
PDPN-210ENST00000513143 OR51E2Q9H255 320 aa10.74□□□□□ -0.69
PDPN-210ENST00000513143 PURGQ9UJV8 347 aaKnown RBP10.74□□□□□ -0.69
PDPN-210ENST00000513143 DHDHQ9UQ10 334 aa10.74□□□□□ -0.69
PDPN-210ENST00000513143 FASNP49327 2511 aaKnown RBP10.73□□□□□ -0.69
PDPN-210ENST00000513143 GCN1Q92616 2671 aaKnown RBP10.73□□□□□ -0.69
PDPN-210ENST00000513143 TRBV5-7A0A0A0MS05 114 aa10.73□□□□□ -0.69
PDPN-210ENST00000513143 IQCF6A8MYZ5 107 aa10.73□□□□□ -0.69
PDPN-210ENST00000513143 IGHV3-13P01766 116 aa10.73□□□□□ -0.69
PDPN-210ENST00000513143 RAF1P04049 648 aa10.73□□□□□ -0.69
PDPN-210ENST00000513143 CD2P06729 351 aa10.73□□□□□ -0.69
PDPN-210ENST00000513143 OR4A8P0C604 315 aa10.73□□□□□ -0.69
PDPN-210ENST00000513143 MAPK3P27361 379 aaPredicted RBP10.73□□□□□ -0.69
PDPN-210ENST00000513143 FGF9P31371 208 aaPredicted RBP10.73□□□□□ -0.69
PDPN-210ENST00000513143 APOBEC3AP31941 199 aaPredicted RBP10.73□□□□□ -0.69
PDPN-210ENST00000513143 SOX2P48431 317 aa10.73□□□□□ -0.69
PDPN-210ENST00000513143 KLF3P57682 345 aaPredicted RBP10.73□□□□□ -0.69
PDPN-210ENST00000513143 ALKBH6Q3KRA9 238 aa10.73□□□□□ -0.69
PDPN-210ENST00000513143 TIMM50Q3ZCQ8 353 aa10.73□□□□□ -0.69
PDPN-210ENST00000513143 ZMAT1Q5H9K5 638 aa10.73□□□□□ -0.69
PDPN-210ENST00000513143 GPR107Q5VW38 600 aa10.73□□□□□ -0.69
PDPN-210ENST00000513143 GDPGP1Q6ZNW5 385 aa10.73□□□□□ -0.69
PDPN-210ENST00000513143 CEACAM19Q7Z692 300 aa10.73□□□□□ -0.69
PDPN-210ENST00000513143 LRP11Q86VZ4 500 aa10.73□□□□□ -0.69
PDPN-210ENST00000513143 PARP16Q8N5Y8 322 aa10.73□□□□□ -0.69
PDPN-210ENST00000513143 CSNK2A3Q8NEV1 391 aa10.73□□□□□ -0.69
PDPN-210ENST00000513143 PHYHIPQ92561 330 aa10.73□□□□□ -0.69
PDPN-210ENST00000513143 TMEM106AQ96A25 262 aa10.73□□□□□ -0.69
PDPN-210ENST00000513143 FGGYQ96C11 551 aa10.73□□□□□ -0.69
PDPN-210ENST00000513143 ADAT3Q96EY9 351 aaPredicted RBP10.73□□□□□ -0.69
PDPN-210ENST00000513143 TRMT61AQ96FX7 289 aaKnown RBP10.73□□□□□ -0.69
PDPN-210ENST00000513143 DERL3Q96Q80 235 aa10.73□□□□□ -0.69
PDPN-210ENST00000513143 DHRS9Q9BPW9 319 aa10.73□□□□□ -0.69
PDPN-210ENST00000513143 MRPL37Q9BZE1 423 aaKnown RBP10.73□□□□□ -0.69
PDPN-210ENST00000513143 CISD1Q9NZ45 108 aaKnown RBP10.73□□□□□ -0.69
PDPN-210ENST00000513143 DUSP13Q9UII6 198 aa10.73□□□□□ -0.69
PDPN-210ENST00000513143 FZR1Q9UM11 496 aa10.73□□□□□ -0.69
PDPN-210ENST00000513143 SSR3Q9UNL2 185 aa10.73□□□□□ -0.69
PDPN-210ENST00000513143 PIGLQ9Y2B2 252 aa10.73□□□□□ -0.69
PDPN-210ENST00000513143 RAI1Q7Z5J4 1906 aaPredicted RBP10.73□□□□□ -0.69
PDPN-210ENST00000513143 HRNRQ86YZ3 2850 aaPredicted RBP10.72□□□□□ -0.69
PDPN-210ENST00000513143 ZNF816-ZNF321PA0A0X1KG74 233 aa10.72□□□□□ -0.69
PDPN-210ENST00000513143 A0A1W2PPR1 153 aa10.72□□□□□ -0.69
PDPN-210ENST00000513143 PIN1P1O15428 100 aa10.72□□□□□ -0.69
PDPN-210ENST00000513143 AIREO43918 545 aa10.72□□□□□ -0.69
PDPN-210ENST00000513143 CTAG2O75638 210 aa10.72□□□□□ -0.69
PDPN-210ENST00000513143 CST4P01036 141 aa10.72□□□□□ -0.69
PDPN-210ENST00000513143 UCHL1P09936 223 aa10.72□□□□□ -0.69
PDPN-210ENST00000513143 FAHP16930 419 aa10.72□□□□□ -0.69
PDPN-210ENST00000513143 EVX1P49640 407 aa10.72□□□□□ -0.69
PDPN-210ENST00000513143 SELENOVP59797 346 aa10.72□□□□□ -0.69
PDPN-210ENST00000513143 TMEM42Q69YG0 159 aa10.72□□□□□ -0.69
PDPN-210ENST00000513143 PAMR1Q6UXH9 720 aa10.72□□□□□ -0.69
PDPN-210ENST00000513143 SLC16A12Q6ZSM3 486 aa10.72□□□□□ -0.69
PDPN-210ENST00000513143 SERPINA12Q8IW75 414 aa10.72□□□□□ -0.69
PDPN-210ENST00000513143 FTMTQ8N4E7 242 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms