RNA–Protein interactions for RNA: ENST00000512632.5

LIMCH1-215, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMCH1, Length 4,792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-215ENST00000512632 OR2AJ1Q8NGZ0 328 aa8.19□□□□□ -1.1
LIMCH1-215ENST00000512632 FGF21Q9NSA1 209 aa8.19□□□□□ -1.1
LIMCH1-215ENST00000512632 KLRF1Q9NZS2 232 aa8.19□□□□□ -1.1
LIMCH1-215ENST00000512632 GPR132Q9UNW8 380 aa8.19□□□□□ -1.1
LIMCH1-215ENST00000512632 LAP3P28838 519 aa8.19□□□□□ -1.1
LIMCH1-215ENST00000512632 CSNK1EP49674 416 aaKnown RBP8.19□□□□□ -1.1
LIMCH1-215ENST00000512632 ZNF121P58317 390 aaPredicted RBP8.19□□□□□ -1.1
LIMCH1-215ENST00000512632 C17orf67Q0P5P2 114 aa8.19□□□□□ -1.1
LIMCH1-215ENST00000512632 FAM57BQ71RH2 274 aa8.19□□□□□ -1.1
LIMCH1-215ENST00000512632 TSTD1Q8NFU3 115 aa8.19□□□□□ -1.1
LIMCH1-215ENST00000512632 C2CD4CQ8TF44 421 aa8.19□□□□□ -1.1
LIMCH1-215ENST00000512632 UQCC2Q9BRT2 126 aa8.19□□□□□ -1.1
LIMCH1-215ENST00000512632 ZNF175Q9Y473 711 aa8.19□□□□□ -1.1
LIMCH1-215ENST00000512632 LHFPL6Q9Y693 200 aa8.19□□□□□ -1.1
LIMCH1-215ENST00000512632 LRP4O75096 1905 aa8.19□□□□□ -1.1
LIMCH1-215ENST00000512632 DBX1A6NMT0 343 aa8.19□□□□□ -1.1
LIMCH1-215ENST00000512632 FGF16O43320 207 aa8.19□□□□□ -1.1
LIMCH1-215ENST00000512632 FBXO24O75426 580 aa8.19□□□□□ -1.1
LIMCH1-215ENST00000512632 SFTPDP35247 375 aa8.19□□□□□ -1.1
LIMCH1-215ENST00000512632 CLRN1P58418 232 aa8.19□□□□□ -1.1
LIMCH1-215ENST00000512632 MYBPHQ13203 477 aa8.19□□□□□ -1.1
LIMCH1-215ENST00000512632 C14orf28Q4W4Y0 310 aa8.19□□□□□ -1.1
LIMCH1-215ENST00000512632 UQCC3Q6UW78 93 aa8.19□□□□□ -1.1
LIMCH1-215ENST00000512632 ZNF441Q8N8Z8 693 aa8.19□□□□□ -1.1
LIMCH1-215ENST00000512632 OR5T2Q8NGG2 359 aa8.19□□□□□ -1.1
LIMCH1-215ENST00000512632 OR8B12Q8NGG6 310 aa8.19□□□□□ -1.1
LIMCH1-215ENST00000512632 OR5H2Q8NGV7 314 aa8.19□□□□□ -1.1
LIMCH1-215ENST00000512632 STT3BQ8TCJ2 826 aa8.19□□□□□ -1.1
LIMCH1-215ENST00000512632 LIN37Q96GY3 246 aaPredicted RBP8.19□□□□□ -1.1
LIMCH1-215ENST00000512632 PARP12Q9H0J9 701 aaKnown RBP8.19□□□□□ -1.1
LIMCH1-215ENST00000512632 RAMP1O60894 148 aa8.19□□□□□ -1.1
LIMCH1-215ENST00000512632 CHRM2P08172 466 aa8.19□□□□□ -1.1
LIMCH1-215ENST00000512632 HIST1H1DP16402 221 aaKnown RBP8.19□□□□□ -1.1
LIMCH1-215ENST00000512632 KLK2P20151 261 aa8.19□□□□□ -1.1
LIMCH1-215ENST00000512632 NME2P22392 152 aa8.19□□□□□ -1.1
LIMCH1-215ENST00000512632 FAHD2BQ6P2I3 314 aaPredicted RBP8.19□□□□□ -1.1
LIMCH1-215ENST00000512632 DRAM2Q6UX65 266 aa8.19□□□□□ -1.1
LIMCH1-215ENST00000512632 C1QL2Q7Z5L3 287 aa8.19□□□□□ -1.1
LIMCH1-215ENST00000512632 SPAG16Q8N0X2 631 aa8.19□□□□□ -1.1
LIMCH1-215ENST00000512632 ZNF283Q8N7M2 679 aa8.19□□□□□ -1.1
LIMCH1-215ENST00000512632 SLC30A7Q8NEW0 376 aa8.19□□□□□ -1.1
LIMCH1-215ENST00000512632 MVB12AQ96EY5 273 aa8.19□□□□□ -1.1
LIMCH1-215ENST00000512632 FAHD2AQ96GK7 314 aa8.19□□□□□ -1.1
LIMCH1-215ENST00000512632 SLC22A11Q9NSA0 550 aa8.19□□□□□ -1.1
LIMCH1-215ENST00000512632 RPH3AQ9Y2J0 694 aaPredicted RBP8.19□□□□□ -1.1
LIMCH1-215ENST00000512632 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.18□□□□□ -1.1
LIMCH1-215ENST00000512632 LTBRP36941 435 aa8.18□□□□□ -1.1
LIMCH1-215ENST00000512632 CSNK2A1P68400 391 aaPredicted RBP8.18□□□□□ -1.1
LIMCH1-215ENST00000512632 CYCSP99999 105 aaKnown RBP8.18□□□□□ -1.1
LIMCH1-215ENST00000512632 CSNK2A3Q8NEV1 391 aa8.18□□□□□ -1.1
LIMCH1-215ENST00000512632 FLVCR1Q9Y5Y0 555 aa8.18□□□□□ -1.1
LIMCH1-215ENST00000512632 IGHV1OR21-1A0A087WYE8 117 aa8.18□□□□□ -1.1
LIMCH1-215ENST00000512632 IGHV1OR15-9A0A0B4J2B8 117 aa8.18□□□□□ -1.1
LIMCH1-215ENST00000512632 LIPT2A6NK58 231 aa8.18□□□□□ -1.1
LIMCH1-215ENST00000512632 C2CD4DB7Z1M9 353 aa8.18□□□□□ -1.1
LIMCH1-215ENST00000512632 F8VVB4 439 aa8.18□□□□□ -1.1
LIMCH1-215ENST00000512632 F8VWA3 439 aa8.18□□□□□ -1.1
LIMCH1-215ENST00000512632 CDC14BO60729 498 aa8.18□□□□□ -1.1
LIMCH1-215ENST00000512632 SFT2D2O95562 160 aa8.18□□□□□ -1.1
LIMCH1-215ENST00000512632 RCC1P18754 421 aaPredicted RBP8.18□□□□□ -1.1
LIMCH1-215ENST00000512632 ID4P47928 161 aa8.18□□□□□ -1.1
LIMCH1-215ENST00000512632 CX3CR1P49238 355 aa8.18□□□□□ -1.1
LIMCH1-215ENST00000512632 SUPT4H1P63272 117 aaKnown RBP8.18□□□□□ -1.1
LIMCH1-215ENST00000512632 ZP4Q12836 540 aa8.18□□□□□ -1.1
LIMCH1-215ENST00000512632 HFEQ30201 348 aa8.18□□□□□ -1.1
LIMCH1-215ENST00000512632 RPL7L1Q6DKI1 246 aaKnown RBP8.18□□□□□ -1.1
LIMCH1-215ENST00000512632 PGAP1Q75T13 922 aa8.18□□□□□ -1.1
LIMCH1-215ENST00000512632 KCNG3Q8TAE7 436 aa8.18□□□□□ -1.1
LIMCH1-215ENST00000512632 NUBPLQ8TB37 319 aa8.18□□□□□ -1.1
LIMCH1-215ENST00000512632 DDIT4LQ96D03 193 aa8.18□□□□□ -1.1
LIMCH1-215ENST00000512632 SLC2A4RGQ9NR83 387 aa8.18□□□□□ -1.1
LIMCH1-215ENST00000512632 B3GAT1Q9P2W7 334 aa8.18□□□□□ -1.1
LIMCH1-215ENST00000512632 ANKUB1A6NFN9 424 aa8.18□□□□□ -1.1
LIMCH1-215ENST00000512632 C10orf142B7Z368 130 aa8.18□□□□□ -1.1
LIMCH1-215ENST00000512632 ZNF814B7Z6K7 855 aa8.18□□□□□ -1.1
LIMCH1-215ENST00000512632 LRP3O75074 770 aa8.18□□□□□ -1.1
LIMCH1-215ENST00000512632 FAM157CP0CG43 387 aa8.18□□□□□ -1.1
LIMCH1-215ENST00000512632 TAS2R31P59538 309 aa8.18□□□□□ -1.1
LIMCH1-215ENST00000512632 RBM39Q14498 530 aaKnown RBP8.18□□□□□ -1.1
LIMCH1-215ENST00000512632 FAM69BQ5VUD6 431 aa8.18□□□□□ -1.1
LIMCH1-215ENST00000512632 LCN10Q6JVE6 187 aa8.18□□□□□ -1.1
LIMCH1-215ENST00000512632 OR51T1Q8NGJ9 327 aa8.18□□□□□ -1.1
LIMCH1-215ENST00000512632 C1orf147Q96MC9 270 aaPredicted RBP8.18□□□□□ -1.1
LIMCH1-215ENST00000512632 OR5B2Q96R09 309 aa8.18□□□□□ -1.1
LIMCH1-215ENST00000512632 SMIM3Q9BZL3 60 aa8.18□□□□□ -1.1
LIMCH1-215ENST00000512632 UQCC1Q9NVA1 299 aa8.18□□□□□ -1.1
LIMCH1-215ENST00000512632 EHFQ9NZC4 300 aa8.18□□□□□ -1.1
LIMCH1-215ENST00000512632 MYO7BQ6PIF6 2116 aa8.18□□□□□ -1.1
LIMCH1-215ENST00000512632 A0A1B0GX78 115 aa8.18□□□□□ -1.1
LIMCH1-215ENST00000512632 ZNF98A6NK75 572 aa8.18□□□□□ -1.1
LIMCH1-215ENST00000512632 LMO7DNF2Z398 122 aa8.18□□□□□ -1.1
LIMCH1-215ENST00000512632 CD79AP11912 226 aa8.18□□□□□ -1.1
LIMCH1-215ENST00000512632 MPZP25189 248 aa8.18□□□□□ -1.1
LIMCH1-215ENST00000512632 APOBEC1P41238 236 aaKnown RBP8.18□□□□□ -1.1
LIMCH1-215ENST00000512632 SNU13P55769 128 aaKnown RBP8.18□□□□□ -1.1
LIMCH1-215ENST00000512632 UEVLDQ8IX04 471 aa8.18□□□□□ -1.1
LIMCH1-215ENST00000512632 OR13G1Q8NGZ3 307 aa8.18□□□□□ -1.1
LIMCH1-215ENST00000512632 ST8SIA1Q92185 356 aa8.18□□□□□ -1.1
LIMCH1-215ENST00000512632 CDC6Q99741 560 aa8.18□□□□□ -1.1
LIMCH1-215ENST00000512632 CMSS1Q9BQ75 279 aaKnown RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms