RNA–Protein interactions for RNA: ENST00000512094.5

NPHP3-210, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-210ENST00000512094 RNASEKQ6P5S7 137 aaKnown RBP0.74□□□□□ -2.29
NPHP3-210ENST00000512094 BBS7Q8IWZ6 715 aa0.74□□□□□ -2.29
NPHP3-210ENST00000512094 CPNE9Q8IYJ1 553 aa0.74□□□□□ -2.29
NPHP3-210ENST00000512094 SLC25A29Q8N8R3 303 aa0.74□□□□□ -2.29
NPHP3-210ENST00000512094 OR52M1Q8NGK5 317 aa0.74□□□□□ -2.29
NPHP3-210ENST00000512094 OR4K13Q8NH42 304 aa0.74□□□□□ -2.29
NPHP3-210ENST00000512094 ZNF420Q8TAQ5 688 aaPredicted RBP0.74□□□□□ -2.29
NPHP3-210ENST00000512094 MUC7Q8TAX7 377 aa0.74□□□□□ -2.29
NPHP3-210ENST00000512094 KIFAP3Q92845 792 aa0.74□□□□□ -2.29
NPHP3-210ENST00000512094 KCNS1Q96KK3 526 aa0.74□□□□□ -2.29
NPHP3-210ENST00000512094 C18orf15Q96N68 181 aa0.74□□□□□ -2.29
NPHP3-210ENST00000512094 EMC6Q9BV81 110 aa0.74□□□□□ -2.29
NPHP3-210ENST00000512094 API5Q9BZZ5 524 aaKnown RBP0.74□□□□□ -2.29
NPHP3-210ENST00000512094 RGS18Q9NS28 235 aa0.74□□□□□ -2.29
NPHP3-210ENST00000512094 MTCH1Q9NZJ7 389 aa0.74□□□□□ -2.29
NPHP3-210ENST00000512094 SSH2Q76I76 1423 aa0.73□□□□□ -2.29
NPHP3-210ENST00000512094 MYBPHLA2RUH7 354 aa0.73□□□□□ -2.29
NPHP3-210ENST00000512094 NCBP2LA6PVI3 153 aaKnown RBP0.73□□□□□ -2.29
NPHP3-210ENST00000512094 NDUFAB1O14561 156 aa0.73□□□□□ -2.29
NPHP3-210ENST00000512094 SCAMP2O15127 329 aaKnown RBP0.73□□□□□ -2.29
NPHP3-210ENST00000512094 CLDN11O75508 207 aa0.73□□□□□ -2.29
NPHP3-210ENST00000512094 FLOT1O75955 427 aa0.73□□□□□ -2.29
NPHP3-210ENST00000512094 SLC2A3P11169 496 aa0.73□□□□□ -2.29
NPHP3-210ENST00000512094 HNRNPH3P31942 346 aaKnown RBP0.73□□□□□ -2.29
NPHP3-210ENST00000512094 PFN2P35080 140 aa0.73□□□□□ -2.29
NPHP3-210ENST00000512094 POLR2IP36954 125 aaKnown RBP0.73□□□□□ -2.29
NPHP3-210ENST00000512094 NUDT2P50583 147 aa0.73□□□□□ -2.29
NPHP3-210ENST00000512094 RAB7AP51149 207 aa0.73□□□□□ -2.29
NPHP3-210ENST00000512094 GBX2P52951 348 aaPredicted RBP0.73□□□□□ -2.29
NPHP3-210ENST00000512094 OR12D2P58182 307 aa0.73□□□□□ -2.29
NPHP3-210ENST00000512094 ELF3P78545 371 aaPredicted RBP0.73□□□□□ -2.29
NPHP3-210ENST00000512094 SEMG2Q02383 582 aa0.73□□□□□ -2.29
NPHP3-210ENST00000512094 TRAM2Q15035 370 aa0.73□□□□□ -2.29
NPHP3-210ENST00000512094 PDZD11Q5EBL8 140 aa0.73□□□□□ -2.29
NPHP3-210ENST00000512094 LDLRAD2Q5SZI1 272 aa0.73□□□□□ -2.29
NPHP3-210ENST00000512094 FAM104BQ5XKR9 115 aa0.73□□□□□ -2.29
NPHP3-210ENST00000512094 KCTD16Q68DU8 428 aa0.73□□□□□ -2.29
NPHP3-210ENST00000512094 WDR59Q6PJI9 974 aa0.73□□□□□ -2.29
NPHP3-210ENST00000512094 TRMT10CQ7L0Y3 403 aaKnown RBP0.73□□□□□ -2.29
NPHP3-210ENST00000512094 CDH26Q8IXH8 852 aa0.73□□□□□ -2.29
NPHP3-210ENST00000512094 CMTM1Q8IZ96 169 aa0.73□□□□□ -2.29
NPHP3-210ENST00000512094 EIF4E3Q8N5X7 224 aaKnown RBP0.73□□□□□ -2.29
NPHP3-210ENST00000512094 DRAM1Q8N682 238 aa0.73□□□□□ -2.29
NPHP3-210ENST00000512094 OR56B2PQ8NGI1 322 aa0.73□□□□□ -2.29
NPHP3-210ENST00000512094 NUBPLQ8TB37 319 aa0.73□□□□□ -2.29
NPHP3-210ENST00000512094 RBPMSQ93062 196 aaKnown RBP0.73□□□□□ -2.29
NPHP3-210ENST00000512094 TUBGCP3Q96CW5 907 aa0.73□□□□□ -2.29
NPHP3-210ENST00000512094 TBC1D31Q96DN5 1066 aa0.73□□□□□ -2.29
NPHP3-210ENST00000512094 ZBTB18Q99592 522 aa0.73□□□□□ -2.29
NPHP3-210ENST00000512094 TEAD3Q99594 435 aa0.73□□□□□ -2.29
NPHP3-210ENST00000512094 CENPKQ9BS16 269 aa0.73□□□□□ -2.29
NPHP3-210ENST00000512094 TBL1XR1Q9BZK7 514 aa0.73□□□□□ -2.29
NPHP3-210ENST00000512094 MRM3Q9HC36 420 aaKnown RBP0.73□□□□□ -2.29
NPHP3-210ENST00000512094 FBXO8Q9NRD0 319 aa0.73□□□□□ -2.29
NPHP3-210ENST00000512094 ACOT9Q9Y305 439 aa0.73□□□□□ -2.29
NPHP3-210ENST00000512094 CAB39Q9Y376 341 aaPredicted RBP0.73□□□□□ -2.29
NPHP3-210ENST00000512094 CSDC2Q9Y534 153 aaKnown RBP0.73□□□□□ -2.29
NPHP3-210ENST00000512094 TRAPPC1Q9Y5R8 145 aa0.73□□□□□ -2.29
NPHP3-210ENST00000512094 RPRD2Q5VT52 1461 aaKnown RBP0.73□□□□□ -2.29
NPHP3-210ENST00000512094 COL22A1Q8NFW1 1626 aaPredicted RBP0.72□□□□□ -2.29
NPHP3-210ENST00000512094 AHNAKQ09666 5890 aaKnown RBP0.72□□□□□ -2.29
NPHP3-210ENST00000512094 IZUMO1RA6ND01 250 aa0.72□□□□□ -2.29
NPHP3-210ENST00000512094 AP3B1O00203 1094 aa0.72□□□□□ -2.29
NPHP3-210ENST00000512094 FGFR1OPO95684 399 aaKnown RBP0.72□□□□□ -2.29
NPHP3-210ENST00000512094 LSM8O95777 96 aaKnown RBP0.72□□□□□ -2.29
NPHP3-210ENST00000512094 CST1P01037 141 aa0.72□□□□□ -2.29
NPHP3-210ENST00000512094 IGHMP01871 453 aa0.72□□□□□ -2.29
NPHP3-210ENST00000512094 PRSS3P35030 304 aa0.72□□□□□ -2.29
NPHP3-210ENST00000512094 NDUFA8P51970 172 aa0.72□□□□□ -2.29
NPHP3-210ENST00000512094 ZNF121P58317 390 aaPredicted RBP0.72□□□□□ -2.29
NPHP3-210ENST00000512094 ZMYND11Q15326 602 aa0.72□□□□□ -2.29
NPHP3-210ENST00000512094 HHATQ5VTY9 493 aa0.72□□□□□ -2.29
NPHP3-210ENST00000512094 REEP3Q6NUK4 255 aa0.72□□□□□ -2.29
NPHP3-210ENST00000512094 SLC16A14Q7RTX9 510 aa0.72□□□□□ -2.29
NPHP3-210ENST00000512094 NANOGNBQ7Z5D8 188 aa0.72□□□□□ -2.29
NPHP3-210ENST00000512094 LRRC8AQ8IWT6 810 aa0.72□□□□□ -2.29
NPHP3-210ENST00000512094 EIF1ADQ8N9N8 165 aaKnown RBP0.72□□□□□ -2.29
NPHP3-210ENST00000512094 OR8K3Q8NH51 312 aa0.72□□□□□ -2.29
NPHP3-210ENST00000512094 KCNG3Q8TAE7 436 aa0.72□□□□□ -2.29
NPHP3-210ENST00000512094 YIPF6Q96EC8 236 aa0.72□□□□□ -2.29
NPHP3-210ENST00000512094 C20orf166-AS1Q96NR2 134 aa0.72□□□□□ -2.29
NPHP3-210ENST00000512094 OR51M1Q9H341 326 aa0.72□□□□□ -2.29
NPHP3-210ENST00000512094 STX18Q9P2W9 335 aaKnown RBP0.72□□□□□ -2.29
NPHP3-210ENST00000512094 CES1P1Q9UKY3 287 aa0.72□□□□□ -2.29
NPHP3-210ENST00000512094 FLG2Q5D862 2391 aaPredicted RBP0.71□□□□□ -2.3
NPHP3-210ENST00000512094 PCDH11XQ9BZA7 1347 aa0.71□□□□□ -2.3
NPHP3-210ENST00000512094 THADAQ6YHU6 1953 aa0.71□□□□□ -2.3
NPHP3-210ENST00000512094 IGKV1-27A0A075B6S5 117 aa0.71□□□□□ -2.3
NPHP3-210ENST00000512094 GOLGA8JA6NMD2 632 aa0.71□□□□□ -2.3
NPHP3-210ENST00000512094 K7EMT4 169 aa0.71□□□□□ -2.3
NPHP3-210ENST00000512094 SLC31A1O15431 190 aa0.71□□□□□ -2.3
NPHP3-210ENST00000512094 CLOCKO15516 846 aa0.71□□□□□ -2.3
NPHP3-210ENST00000512094 NMT2O60551 498 aa0.71□□□□□ -2.3
NPHP3-210ENST00000512094 SPAG6O75602 509 aa0.71□□□□□ -2.3
NPHP3-210ENST00000512094 AQP8O94778 261 aa0.71□□□□□ -2.3
NPHP3-210ENST00000512094 TSPAN13O95857 204 aa0.71□□□□□ -2.3
NPHP3-210ENST00000512094 GOLGA8HP0CJ92 632 aa0.71□□□□□ -2.3
NPHP3-210ENST00000512094 ZNF708P17019 499 aa0.71□□□□□ -2.3
NPHP3-210ENST00000512094 CSNK2A2P19784 350 aaPredicted RBP0.71□□□□□ -2.3
NPHP3-210ENST00000512094 RGS6P49758 472 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms