RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 GMPR2Q9P2T1 348 aaKnown RBP15.42■□□□□ 0.06
HMGCS1-206ENST00000511774 B9D1Q9UPM9 204 aa15.42■□□□□ 0.06
HMGCS1-206ENST00000511774 AURKCQ9UQB9 309 aa15.42■□□□□ 0.06
HMGCS1-206ENST00000511774 CAPN7Q9Y6W3 813 aa15.42■□□□□ 0.06
HMGCS1-206ENST00000511774 GGT3PA6NGU5 568 aa15.41■□□□□ 0.06
HMGCS1-206ENST00000511774 NDUFB2O95178 105 aa15.41■□□□□ 0.06
HMGCS1-206ENST00000511774 TXNDC12O95881 172 aa15.41■□□□□ 0.06
HMGCS1-206ENST00000511774 PSKH1P11801 424 aa15.41■□□□□ 0.06
HMGCS1-206ENST00000511774 MUC1P15941 1255 aaPredicted RBP15.41■□□□□ 0.06
HMGCS1-206ENST00000511774 MICBQ29980 383 aa15.41■□□□□ 0.06
HMGCS1-206ENST00000511774 STUMQ69YW2 141 aa15.41■□□□□ 0.06
HMGCS1-206ENST00000511774 PGBD2Q6P3X8 592 aa15.41■□□□□ 0.06
HMGCS1-206ENST00000511774 WDR82Q6UXN9 313 aa15.41■□□□□ 0.06
HMGCS1-206ENST00000511774 ADCK1Q86TW2 530 aa15.41■□□□□ 0.06
HMGCS1-206ENST00000511774 Q8N2B8 174 aa15.41■□□□□ 0.06
HMGCS1-206ENST00000511774 OR51G2Q8NGK0 314 aa15.41■□□□□ 0.06
HMGCS1-206ENST00000511774 RABEP2Q9H5N1 569 aa15.41■□□□□ 0.06
HMGCS1-206ENST00000511774 SRA1Q9HD15 236 aaKnown RBP15.41■□□□□ 0.06
HMGCS1-206ENST00000511774 CYB5R1Q9UHQ9 305 aa15.41■□□□□ 0.06
HMGCS1-206ENST00000511774 NOP16Q9Y3C1 178 aaKnown RBP15.41■□□□□ 0.06
HMGCS1-206ENST00000511774 M0R135 149 aa15.4■□□□□ 0.06
HMGCS1-206ENST00000511774 NDUFB3O43676 98 aa15.4■□□□□ 0.06
HMGCS1-206ENST00000511774 CD33P20138 364 aa15.4■□□□□ 0.06
HMGCS1-206ENST00000511774 SELENOWP63302 87 aa15.4■□□□□ 0.06
HMGCS1-206ENST00000511774 RFX4Q33E94 735 aa15.4■□□□□ 0.06
HMGCS1-206ENST00000511774 Q6ZS46 218 aa15.4■□□□□ 0.06
HMGCS1-206ENST00000511774 SLC36A1Q7Z2H8 476 aa15.4■□□□□ 0.06
HMGCS1-206ENST00000511774 ZNF799Q96GE5 643 aa15.4■□□□□ 0.06
HMGCS1-206ENST00000511774 NPFFR1Q9GZQ6 430 aa15.4■□□□□ 0.06
HMGCS1-206ENST00000511774 ELL3Q9HB65 397 aaPredicted RBP15.4■□□□□ 0.06
HMGCS1-206ENST00000511774 A0A1W2PRX2 142 aa15.39■□□□□ 0.05
HMGCS1-206ENST00000511774 M0R1W7 72 aa15.39■□□□□ 0.05
HMGCS1-206ENST00000511774 BHLHE40O14503 412 aa15.39■□□□□ 0.05
HMGCS1-206ENST00000511774 RPS27P42677 84 aaKnown RBP15.39■□□□□ 0.05
HMGCS1-206ENST00000511774 TPTEP56180 551 aa15.39■□□□□ 0.05
HMGCS1-206ENST00000511774 ECH1Q13011 328 aa15.39■□□□□ 0.05
HMGCS1-206ENST00000511774 DGUOKQ16854 277 aa15.39■□□□□ 0.05
HMGCS1-206ENST00000511774 ATPAF1Q5TC12 328 aaPredicted RBP15.39■□□□□ 0.05
HMGCS1-206ENST00000511774 NCR3LG1Q68D85 454 aa15.39■□□□□ 0.05
HMGCS1-206ENST00000511774 PGM2L1Q6PCE3 622 aa15.39■□□□□ 0.05
HMGCS1-206ENST00000511774 TSPEARQ8WU66 669 aa15.39■□□□□ 0.05
HMGCS1-206ENST00000511774 GAFA1Q96PS6 74 aa15.39■□□□□ 0.05
HMGCS1-206ENST00000511774 OR5M11Q96RB7 305 aa15.39■□□□□ 0.05
HMGCS1-206ENST00000511774 WNT10AQ9GZT5 417 aa15.39■□□□□ 0.05
HMGCS1-206ENST00000511774 WDR13Q9H1Z4 485 aa15.39■□□□□ 0.05
HMGCS1-206ENST00000511774 METTL8Q9H825 291 aaKnown RBP15.39■□□□□ 0.05
HMGCS1-206ENST00000511774 RNPEPL1Q9HAU8 725 aa15.39■□□□□ 0.05
HMGCS1-206ENST00000511774 SNTG1Q9NSN8 517 aa15.39■□□□□ 0.05
HMGCS1-206ENST00000511774 MRPL22Q9NWU5 206 aaKnown RBP15.39■□□□□ 0.05
HMGCS1-206ENST00000511774 IFNA14P01570 189 aa15.38■□□□□ 0.05
HMGCS1-206ENST00000511774 CRABP1P29762 137 aa15.38■□□□□ 0.05
HMGCS1-206ENST00000511774 OTX1P32242 354 aaPredicted RBP15.38■□□□□ 0.05
HMGCS1-206ENST00000511774 GMFBP60983 142 aa15.38■□□□□ 0.05
HMGCS1-206ENST00000511774 CD69Q07108 199 aa15.38■□□□□ 0.05
HMGCS1-206ENST00000511774 LRRC10Q5BKY1 277 aa15.38■□□□□ 0.05
HMGCS1-206ENST00000511774 PAPD5Q8NDF8 572 aaKnown RBP15.38■□□□□ 0.05
HMGCS1-206ENST00000511774 OR1M1Q8NGA1 313 aa15.38■□□□□ 0.05
HMGCS1-206ENST00000511774 DUS3LQ96G46 650 aaKnown RBP15.38■□□□□ 0.05
HMGCS1-206ENST00000511774 NMNAT3Q96T66 252 aa15.38■□□□□ 0.05
HMGCS1-206ENST00000511774 B9D2Q9BPU9 175 aa15.38■□□□□ 0.05
HMGCS1-206ENST00000511774 FAM234AQ9H0X4 552 aa15.38■□□□□ 0.05
HMGCS1-206ENST00000511774 FN3KQ9H479 309 aa15.38■□□□□ 0.05
HMGCS1-206ENST00000511774 RAB18Q9NP72 206 aa15.38■□□□□ 0.05
HMGCS1-206ENST00000511774 ANGPTL7O43827 346 aa15.37■□□□□ 0.05
HMGCS1-206ENST00000511774 SLC2A1P11166 492 aa15.37■□□□□ 0.05
HMGCS1-206ENST00000511774 CYLC2Q14093 348 aaPredicted RBP15.37■□□□□ 0.05
HMGCS1-206ENST00000511774 AANATQ16613 207 aa15.37■□□□□ 0.05
HMGCS1-206ENST00000511774 TMEM95Q3KNT9 176 aa15.37■□□□□ 0.05
HMGCS1-206ENST00000511774 ERICH5Q6P6B1 374 aa15.37■□□□□ 0.05
HMGCS1-206ENST00000511774 DPY19L4Q7Z388 723 aa15.37■□□□□ 0.05
HMGCS1-206ENST00000511774 CROCCP2Q86T23 111 aa15.37■□□□□ 0.05
HMGCS1-206ENST00000511774 DYNAPQ8N1N2 210 aa15.37■□□□□ 0.05
HMGCS1-206ENST00000511774 OR8J3Q8NGG0 315 aa15.37■□□□□ 0.05
HMGCS1-206ENST00000511774 RSRC1Q96IZ7 334 aaKnown RBP15.37■□□□□ 0.05
HMGCS1-206ENST00000511774 DDOQ99489 341 aa15.37■□□□□ 0.05
HMGCS1-206ENST00000511774 CDCA4Q9BXL8 241 aa15.37■□□□□ 0.05
HMGCS1-206ENST00000511774 C14orf119Q9NWQ9 140 aa15.37■□□□□ 0.05
HMGCS1-206ENST00000511774 ZNF391Q9UJN7 358 aa15.37■□□□□ 0.05
HMGCS1-206ENST00000511774 IFNW1P05000 195 aa15.36■□□□□ 0.05
HMGCS1-206ENST00000511774 HOXD3P31249 432 aaPredicted RBP15.36■□□□□ 0.05
HMGCS1-206ENST00000511774 IFNA8P32881 189 aa15.36■□□□□ 0.05
HMGCS1-206ENST00000511774 OMPP47874 163 aa15.36■□□□□ 0.05
HMGCS1-206ENST00000511774 RAB13P51153 203 aa15.36■□□□□ 0.05
HMGCS1-206ENST00000511774 COL10A1Q03692 680 aa15.36■□□□□ 0.05
HMGCS1-206ENST00000511774 DPY19L2P2Q6ZN68 376 aa15.36■□□□□ 0.05
HMGCS1-206ENST00000511774 ZNF788Q6ZQV5 615 aa15.36■□□□□ 0.05
HMGCS1-206ENST00000511774 OR9Q1Q8NGQ5 310 aa15.36■□□□□ 0.05
HMGCS1-206ENST00000511774 OR2AJ1Q8NGZ0 328 aa15.36■□□□□ 0.05
HMGCS1-206ENST00000511774 C12orf43Q96C57 262 aaKnown RBP15.36■□□□□ 0.05
HMGCS1-206ENST00000511774 TMBIM4Q9HC24 238 aa15.36■□□□□ 0.05
HMGCS1-206ENST00000511774 RPRD1BQ9NQG5 326 aaKnown RBP15.36■□□□□ 0.05
HMGCS1-206ENST00000511774 HAO2Q9NYQ3 351 aa15.36■□□□□ 0.05
HMGCS1-206ENST00000511774 SLC25A10Q9UBX3 287 aaPredicted RBP15.36■□□□□ 0.05
HMGCS1-206ENST00000511774 SF3B6Q9Y3B4 125 aaKnown RBP15.36■□□□□ 0.05
HMGCS1-206ENST00000511774 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.35■□□□□ 0.05
HMGCS1-206ENST00000511774 FAM220BPB1ANY3 271 aa15.35■□□□□ 0.05
HMGCS1-206ENST00000511774 CDIPTO14735 213 aa15.35■□□□□ 0.05
HMGCS1-206ENST00000511774 MXRA7P84157 204 aa15.35■□□□□ 0.05
HMGCS1-206ENST00000511774 DNM1P34Q6PK57 102 aa15.35■□□□□ 0.05
HMGCS1-206ENST00000511774 LYPD4Q6UWN0 246 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms