RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 PPIAL4FP0DN26 164 aa13.53□□□□□ -0.24
PDLIM5-216ENST00000511767 HNF1AP20823 631 aa13.53□□□□□ -0.24
PDLIM5-216ENST00000511767 CFL1P23528 166 aaKnown RBP13.53□□□□□ -0.24
PDLIM5-216ENST00000511767 CPT2P23786 658 aa13.53□□□□□ -0.24
PDLIM5-216ENST00000511767 LCN1P1Q5VSP4 162 aa13.53□□□□□ -0.24
PDLIM5-216ENST00000511767 PRAMEF6Q5VXH4 476 aa13.53□□□□□ -0.24
PDLIM5-216ENST00000511767 ZNF771Q7L3S4 317 aaPredicted RBP13.53□□□□□ -0.24
PDLIM5-216ENST00000511767 ZNF679Q8IYX0 411 aa13.53□□□□□ -0.24
PDLIM5-216ENST00000511767 ASB17Q8WXJ9 295 aa13.53□□□□□ -0.24
PDLIM5-216ENST00000511767 PPP1R14AQ96A00 147 aa13.53□□□□□ -0.24
PDLIM5-216ENST00000511767 LYZL4Q96KX0 146 aa13.53□□□□□ -0.24
PDLIM5-216ENST00000511767 OR8B4Q96RC9 309 aa13.53□□□□□ -0.24
PDLIM5-216ENST00000511767 MROQ9BYG7 248 aa13.53□□□□□ -0.24
PDLIM5-216ENST00000511767 RIBC2Q9H4K1 309 aa13.53□□□□□ -0.24
PDLIM5-216ENST00000511767 PPP1R3EQ9H7J1 279 aa13.53□□□□□ -0.24
PDLIM5-216ENST00000511767 ADGRL4Q9HBW9 690 aa13.53□□□□□ -0.24
PDLIM5-216ENST00000511767 S100A14Q9HCY8 104 aa13.53□□□□□ -0.24
PDLIM5-216ENST00000511767 UFSP2Q9NUQ7 469 aa13.53□□□□□ -0.24
PDLIM5-216ENST00000511767 USE1Q9NZ43 259 aa13.53□□□□□ -0.24
PDLIM5-216ENST00000511767 POLR3KQ9Y2Y1 108 aaPredicted RBP13.53□□□□□ -0.24
PDLIM5-216ENST00000511767 RHBDD3Q9Y3P4 386 aa13.53□□□□□ -0.24
PDLIM5-216ENST00000511767 PPIAL4AQ9Y536 164 aa13.53□□□□□ -0.24
PDLIM5-216ENST00000511767 PPIAL4CA0A0B4J2A2 164 aa13.52□□□□□ -0.25
PDLIM5-216ENST00000511767 TMEM269A0A1B0GVZ9 245 aa13.52□□□□□ -0.25
PDLIM5-216ENST00000511767 ANKRD30BLA7E2S9 258 aa13.52□□□□□ -0.25
PDLIM5-216ENST00000511767 TRAPPC2LH3BP13 241 aa13.52□□□□□ -0.25
PDLIM5-216ENST00000511767 TNFRSF13BO14836 293 aaPredicted RBP13.52□□□□□ -0.25
PDLIM5-216ENST00000511767 KRT74Q7RTS7 529 aa13.52□□□□□ -0.25
PDLIM5-216ENST00000511767 OR8B12Q8NGG6 310 aa13.52□□□□□ -0.25
PDLIM5-216ENST00000511767 OR8J1Q8NGP2 316 aa13.52□□□□□ -0.25
PDLIM5-216ENST00000511767 TRUB1Q8WWH5 349 aaKnown RBP13.52□□□□□ -0.25
PDLIM5-216ENST00000511767 DVL3Q92997 716 aaPredicted RBP13.52□□□□□ -0.25
PDLIM5-216ENST00000511767 EME1Q96AY2 570 aa13.52□□□□□ -0.25
PDLIM5-216ENST00000511767 CNN2Q99439 309 aaKnown RBP13.52□□□□□ -0.25
PDLIM5-216ENST00000511767 MNTQ99583 582 aa13.52□□□□□ -0.25
PDLIM5-216ENST00000511767 SLC29A1Q99808 456 aa13.52□□□□□ -0.25
PDLIM5-216ENST00000511767 APOL4Q9BPW4 351 aa13.52□□□□□ -0.25
PDLIM5-216ENST00000511767 TMEM246Q9BRR3 403 aa13.52□□□□□ -0.25
PDLIM5-216ENST00000511767 MMP26Q9NRE1 261 aa13.52□□□□□ -0.25
PDLIM5-216ENST00000511767 FAM206AQ9NX38 181 aa13.52□□□□□ -0.25
PDLIM5-216ENST00000511767 RNF7Q9UBF6 113 aa13.52□□□□□ -0.25
PDLIM5-216ENST00000511767 DOCK11Q5JSL3 2073 aa13.51□□□□□ -0.25
PDLIM5-216ENST00000511767 CEACAM18A8MTB9 384 aa13.51□□□□□ -0.25
PDLIM5-216ENST00000511767 MAGEB4O15481 346 aaPredicted RBP13.51□□□□□ -0.25
PDLIM5-216ENST00000511767 FOXH1O75593 365 aa13.51□□□□□ -0.25
PDLIM5-216ENST00000511767 LHBP01229 141 aa13.51□□□□□ -0.25
PDLIM5-216ENST00000511767 GRPP07492 148 aa13.51□□□□□ -0.25
PDLIM5-216ENST00000511767 ACKR3P25106 362 aa13.51□□□□□ -0.25
PDLIM5-216ENST00000511767 HTR1FP30939 366 aa13.51□□□□□ -0.25
PDLIM5-216ENST00000511767 PSMA6P60900 246 aaKnown RBP13.51□□□□□ -0.25
PDLIM5-216ENST00000511767 SEC61A1P61619 476 aaKnown RBP13.51□□□□□ -0.25
PDLIM5-216ENST00000511767 LCN2P80188 198 aa13.51□□□□□ -0.25
PDLIM5-216ENST00000511767 OR8B8Q15620 311 aa13.51□□□□□ -0.25
PDLIM5-216ENST00000511767 ZNF322Q6U7Q0 402 aaPredicted RBP13.51□□□□□ -0.25
PDLIM5-216ENST00000511767 SLC35F2Q8IXU6 374 aa13.51□□□□□ -0.25
PDLIM5-216ENST00000511767 C1orf87Q8N0U7 546 aa13.51□□□□□ -0.25
PDLIM5-216ENST00000511767 MUC20Q8N307 709 aaPredicted RBP13.51□□□□□ -0.25
PDLIM5-216ENST00000511767 CSNK2A3Q8NEV1 391 aa13.51□□□□□ -0.25
PDLIM5-216ENST00000511767 OR11L1Q8NGX0 322 aa13.51□□□□□ -0.25
PDLIM5-216ENST00000511767 HRASLS5Q96KN8 279 aa13.51□□□□□ -0.25
PDLIM5-216ENST00000511767 ADAT1Q9BUB4 502 aaKnown RBP13.51□□□□□ -0.25
PDLIM5-216ENST00000511767 TMPRSS13Q9BYE2 586 aa13.51□□□□□ -0.25
PDLIM5-216ENST00000511767 FN3KRPQ9HA64 309 aa13.51□□□□□ -0.25
PDLIM5-216ENST00000511767 CLN6Q9NWW5 311 aa13.51□□□□□ -0.25
PDLIM5-216ENST00000511767 WARS2Q9UGM6 360 aaKnown RBP13.51□□□□□ -0.25
PDLIM5-216ENST00000511767 A0A0U1RQV5 110 aa13.5□□□□□ -0.25
PDLIM5-216ENST00000511767 J3QLI3 93 aa13.5□□□□□ -0.25
PDLIM5-216ENST00000511767 EI24O14681 340 aa13.5□□□□□ -0.25
PDLIM5-216ENST00000511767 SRSF10O75494 262 aaKnown RBP13.5□□□□□ -0.25
PDLIM5-216ENST00000511767 PNPP00491 289 aa13.5□□□□□ -0.25
PDLIM5-216ENST00000511767 CST4P01036 141 aa13.5□□□□□ -0.25
PDLIM5-216ENST00000511767 IRF2P14316 349 aa13.5□□□□□ -0.25
PDLIM5-216ENST00000511767 SRP14P37108 136 aaKnown RBP13.5□□□□□ -0.25
PDLIM5-216ENST00000511767 ALDH3A2P51648 485 aa13.5□□□□□ -0.25
PDLIM5-216ENST00000511767 HOXA4Q00056 320 aaPredicted RBP13.5□□□□□ -0.25
PDLIM5-216ENST00000511767 MZT1Q08AG7 82 aa13.5□□□□□ -0.25
PDLIM5-216ENST00000511767 TMED1Q13445 227 aa13.5□□□□□ -0.25
PDLIM5-216ENST00000511767 GFOD2Q3B7J2 385 aa13.5□□□□□ -0.25
PDLIM5-216ENST00000511767 ZIK1Q3SY52 487 aaPredicted RBP13.5□□□□□ -0.25
PDLIM5-216ENST00000511767 ZNF404Q494X3 552 aa13.5□□□□□ -0.25
PDLIM5-216ENST00000511767 SLC25A30Q5SVS4 291 aa13.5□□□□□ -0.25
PDLIM5-216ENST00000511767 ZNF826PQ6ZT77 177 aa13.5□□□□□ -0.25
PDLIM5-216ENST00000511767 WDR86Q86TI4 376 aa13.5□□□□□ -0.25
PDLIM5-216ENST00000511767 GID4Q8IVV7 300 aa13.5□□□□□ -0.25
PDLIM5-216ENST00000511767 GALNT4Q8N4A0 578 aa13.5□□□□□ -0.25
PDLIM5-216ENST00000511767 CBR4Q8N4T8 237 aa13.5□□□□□ -0.25
PDLIM5-216ENST00000511767 RFLNBQ8N5W9 214 aa13.5□□□□□ -0.25
PDLIM5-216ENST00000511767 DEFB108BQ8NET1 73 aa13.5□□□□□ -0.25
PDLIM5-216ENST00000511767 ITFG2Q969R8 447 aa13.5□□□□□ -0.25
PDLIM5-216ENST00000511767 RAB3IPQ96QF0 476 aaPredicted RBP13.5□□□□□ -0.25
PDLIM5-216ENST00000511767 PBOV1Q9GZY1 135 aa13.5□□□□□ -0.25
PDLIM5-216ENST00000511767 C14orf119Q9NWQ9 140 aa13.5□□□□□ -0.25
PDLIM5-216ENST00000511767 MIOXQ9UGB7 285 aa13.5□□□□□ -0.25
PDLIM5-216ENST00000511767 OPN4Q9UHM6 478 aa13.5□□□□□ -0.25
PDLIM5-216ENST00000511767 ZNF391Q9UJN7 358 aa13.5□□□□□ -0.25
PDLIM5-216ENST00000511767 DNHD1Q96M86 4753 aa13.49□□□□□ -0.25
PDLIM5-216ENST00000511767 A0A0G2JMP0 313 aa13.49□□□□□ -0.25
PDLIM5-216ENST00000511767 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.49□□□□□ -0.25
PDLIM5-216ENST00000511767 A0A0X1KG70 313 aa13.49□□□□□ -0.25
PDLIM5-216ENST00000511767 IGLV3-1P01715 115 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms