RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 FDXRP22570 491 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 S100A7P31151 101 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 TAS2R31P59538 309 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 DYNLT1P63172 113 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 SLC10A2Q12908 348 aaPredicted RBP3.47□□□□□ -1.85
NEDD4-209ENST00000508871 TMEM249Q2WGJ8 235 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 OR5L1Q8NGL2 311 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 OR52E5Q8NH55 327 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 ADGRG7Q96K78 797 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 RASL10BQ96S79 203 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 ZBP1Q9H171 429 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 NMUR1Q9HB89 426 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 HES4Q9HCC6 221 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 OR12D3Q9UGF7 316 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 PACSIN3Q9UKS6 424 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 RAXQ9Y2V3 346 aa3.47□□□□□ -1.85
NEDD4-209ENST00000508871 COL4A3Q01955 1670 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 A0A087X1B8 175 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 FAM240AA0A1B0GVK7 77 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 RNASEK-C17orf49H0YIS7 233 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 H3BNX3 289 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 RFXAPO00287 272 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 SERPINE2P07093 398 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 NTF3P20783 257 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 CNR1P21554 472 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 FMO3P31513 532 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 GGT2P36268 569 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 NR4A2P43354 598 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 TIAL1Q01085 375 aaKnown RBP eCLIP3.46□□□□□ -1.86
NEDD4-209ENST00000508871 EGR4Q05215 589 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 GINS1Q14691 196 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 CLEC12BQ2HXU8 276 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 C1orf195Q5TG92 126 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 FAM78BQ5VT40 261 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 SYPL2Q5VXT5 272 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 PRR27Q6MZM9 219 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 ZNF534Q76KX8 674 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 TMEM150AQ86TG1 271 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 SPACA3Q8IXA5 215 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 LGI3Q8N145 548 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 SYS1Q8N2H4 156 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 OR6N1Q8NGY5 312 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 SHKBP1Q8TBC3 707 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 RGP1Q92546 391 aaPredicted RBP3.46□□□□□ -1.86
NEDD4-209ENST00000508871 GNRHR2Q96P88 292 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 RBM38Q9H0Z9 239 aaKnown RBP3.46□□□□□ -1.86
NEDD4-209ENST00000508871 ADGRL4Q9HBW9 690 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 IL36AQ9UHA7 158 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 OR51B4Q9Y5P0 310 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 TRIM49D1C9J1S8 452 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 ZNF264O43296 627 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 HCRTO43612 131 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 HBE1P02100 147 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 C1QAP02745 245 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 TFPTP0C1Z6 253 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 CTRB1P17538 263 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 SERPINB5P36952 375 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 PRKXP51817 358 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 PAX2Q02962 417 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 LAPTM4AQ15012 233 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 SHBQ15464 509 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 CYB5R2Q6BCY4 276 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 CTRB2Q6GPI1 263 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 OR4C11Q6IEV9 310 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 TMPRSS12Q86WS5 348 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 LAS2Q8IYD9 372 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 ZNF567Q8N184 647 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 FGFRL1Q8N441 504 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 SMIM20Q8N5G0 67 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 OR10K1Q8NGX5 313 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 OR5K2Q8NHB8 316 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 ZNF461Q8TAF7 563 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 WBP2Q969T9 261 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 P2RY11Q96G91 374 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 Q9N2J8 555 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 TMEM100Q9NV29 134 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 GPATCH2LQ9NWQ4 482 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 FBLN5Q9UBX5 448 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 ERVW-1Q9UQF0 538 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 COL4A2P08572 1712 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 TTC3P53804 2025 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 PNMA8CA0A1B0GUJ8 204 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 ADARB2-AS1A8MUL3 147 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 SYNGR3O43761 229 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 ANGPTL7O43827 346 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 PRKNO60260 465 aaPredicted RBP3.46□□□□□ -1.86
NEDD4-209ENST00000508871 CEACAM4O75871 244 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 TMEM50AO95807 157 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 ZGLP1P0C6A0 271 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 ANOS1P23352 680 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 CSRP3P50461 194 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 DLX6P56179 175 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 UBE2NP61088 152 aaKnown RBP3.46□□□□□ -1.86
NEDD4-209ENST00000508871 MFGE8Q08431 387 aaPredicted RBP3.46□□□□□ -1.86
NEDD4-209ENST00000508871 MLLT11Q13015 90 aaPredicted RBP3.46□□□□□ -1.86
NEDD4-209ENST00000508871 ASAH1Q13510 395 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 MS4A13Q5J8X5 152 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 ANKRD22Q5VYY1 191 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 NHLRC1Q6VVB1 395 aa3.46□□□□□ -1.86
NEDD4-209ENST00000508871 RBMS3Q6XE24 437 aaKnown RBP3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms