RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 EXOSC1Q9Y3B2 195 aaKnown RBP7.78□□□□□ -1.16
NUP54-207ENST00000508583 A0A1B0GWJ7 208 aa7.77□□□□□ -1.17
NUP54-207ENST00000508583 FAM20BO75063 409 aa7.77□□□□□ -1.17
NUP54-207ENST00000508583 WBP4O75554 376 aaKnown RBP7.77□□□□□ -1.17
NUP54-207ENST00000508583 RPP14O95059 124 aaKnown RBP7.77□□□□□ -1.17
NUP54-207ENST00000508583 CLIC3O95833 236 aa7.77□□□□□ -1.17
NUP54-207ENST00000508583 IGHA1P01876 353 aa7.77□□□□□ -1.17
NUP54-207ENST00000508583 HPXP02790 462 aa7.77□□□□□ -1.17
NUP54-207ENST00000508583 CCDC159P0C7I6 412 aa7.77□□□□□ -1.17
NUP54-207ENST00000508583 PIPP12273 146 aaPredicted RBP7.77□□□□□ -1.17
NUP54-207ENST00000508583 IRF2P14316 349 aa7.77□□□□□ -1.17
NUP54-207ENST00000508583 CRYBB2P43320 205 aa7.77□□□□□ -1.17
NUP54-207ENST00000508583 GSK3AP49840 483 aa7.77□□□□□ -1.17
NUP54-207ENST00000508583 FAM3AP98173 230 aa7.77□□□□□ -1.17
NUP54-207ENST00000508583 TNK1Q13470 666 aa7.77□□□□□ -1.17
NUP54-207ENST00000508583 C6orf52Q5T4I8 152 aa7.77□□□□□ -1.17
NUP54-207ENST00000508583 ZNF684Q5T5D7 378 aa7.77□□□□□ -1.17
NUP54-207ENST00000508583 DOK3Q7L591 496 aa7.77□□□□□ -1.17
NUP54-207ENST00000508583 ELMOD2Q8IZ81 293 aa7.77□□□□□ -1.17
NUP54-207ENST00000508583 C1orf87Q8N0U7 546 aa7.77□□□□□ -1.17
NUP54-207ENST00000508583 SEMA6DQ8NFY4 1073 aa7.77□□□□□ -1.17
NUP54-207ENST00000508583 OR8S1Q8NH09 359 aa7.77□□□□□ -1.17
NUP54-207ENST00000508583 NRG4Q8WWG1 115 aa7.77□□□□□ -1.17
NUP54-207ENST00000508583 SGK3Q96BR1 496 aa7.77□□□□□ -1.17
NUP54-207ENST00000508583 C18orf12Q96KH6 178 aa7.77□□□□□ -1.17
NUP54-207ENST00000508583 HIST1H2AAQ96QV6 131 aa7.77□□□□□ -1.17
NUP54-207ENST00000508583 OR2V2Q96R30 315 aa7.77□□□□□ -1.17
NUP54-207ENST00000508583 SIGLEC11Q96RL6 698 aa7.77□□□□□ -1.17
NUP54-207ENST00000508583 PAPOLGQ9BWT3 736 aaKnown RBP7.77□□□□□ -1.17
NUP54-207ENST00000508583 REG4Q9BYZ8 158 aa7.77□□□□□ -1.17
NUP54-207ENST00000508583 ANKRD60Q9BZ19 345 aa7.77□□□□□ -1.17
NUP54-207ENST00000508583 TTTY10Q9BZA0 68 aa7.77□□□□□ -1.17
NUP54-207ENST00000508583 PLEKHA1Q9HB21 404 aa7.77□□□□□ -1.17
NUP54-207ENST00000508583 AMBNQ9NP70 447 aa7.77□□□□□ -1.17
NUP54-207ENST00000508583 FGF20Q9NP95 211 aaPredicted RBP7.77□□□□□ -1.17
NUP54-207ENST00000508583 SCN3BQ9NY72 215 aa7.77□□□□□ -1.17
NUP54-207ENST00000508583 RAB26Q9ULW5 256 aa7.77□□□□□ -1.17
NUP54-207ENST00000508583 PPP1R3CQ9UQK1 317 aa7.77□□□□□ -1.17
NUP54-207ENST00000508583 MPC1Q9Y5U8 109 aa7.77□□□□□ -1.17
NUP54-207ENST00000508583 VPS13CQ709C8 3753 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 ITPR3Q14573 2671 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 CHD3Q12873 2000 aaKnown RBP7.76□□□□□ -1.17
NUP54-207ENST00000508583 ZNF816-ZNF321PA0A0X1KG74 233 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 A0A1B0GVI7 797 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 H7C1Q1 480 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 J3QLW9 94 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 PPIHO43447 177 aaKnown RBP7.76□□□□□ -1.17
NUP54-207ENST00000508583 SYT7O43581 403 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 DHRS3O75911 302 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 NCR1O76036 304 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 LY6HO94772 140 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 CST4P01036 141 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 HTR1AP08908 422 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 GNAO1P09471 354 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 ZNF19P17023 458 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 USF1P22415 310 aaPredicted RBP7.76□□□□□ -1.17
NUP54-207ENST00000508583 CA6P23280 308 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 CD200P41217 278 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 NR4A2P43354 598 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 GATA4P43694 442 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 GPR6P46095 362 aaPredicted RBP7.76□□□□□ -1.17
NUP54-207ENST00000508583 CCR9P51686 369 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 CHN2P52757 468 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 GBX2P52951 348 aaPredicted RBP7.76□□□□□ -1.17
NUP54-207ENST00000508583 CDH15P55291 814 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 ZNF85Q03923 595 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 RIPPLY1Q0D2K3 151 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 ZNF181Q2M3W8 571 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 TP53I3Q53FA7 332 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 TMEM255AQ5JRV8 349 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 TMEM244Q5VVB8 128 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 FDX2Q6P4F2 183 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 Q6ZR03 302 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 SSX6Q7RTT6 188 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 BIVMQ86UB2 503 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 STX19Q8N4C7 294 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 KLHL36Q8N4N3 616 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 RFLNBQ8N5W9 214 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 OR10AD1Q8NGE0 317 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 OR52I1Q8NGK6 324 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 OR11L1Q8NGX0 322 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 OR51E1Q8TCB6 317 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 FBLIM1Q8WUP2 373 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 CCL17Q92583 94 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 RORBQ92753 470 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 RAB1CQ92928 201 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 MYDGFQ969H8 173 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 C10orf35Q96D05 121 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 TMEM80Q96HE8 168 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 MEGF10Q96KG7 1140 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 COX4I2Q96KJ9 171 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 C4orf36Q96KX1 117 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 TECTBQ96PL2 329 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 MICU1Q9BPX6 476 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 TMUB1Q9BVT8 246 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 RTL8AQ9BWD3 113 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 BPESC1Q9GZL8 116 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 COMMD4Q9H0A8 199 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 FN3KRPQ9HA64 309 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 GPR84Q9NQS5 396 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms