RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 OR2V2Q96R30 315 aa12.72□□□□□ -0.37
RNF4-210ENST00000508235 AMBNQ9NP70 447 aa12.72□□□□□ -0.37
RNF4-210ENST00000508235 ABCB9Q9NP78 766 aa12.72□□□□□ -0.37
RNF4-210ENST00000508235 GNG8Q9UK08 70 aa12.72□□□□□ -0.37
RNF4-210ENST00000508235 OR52A1Q9UKL2 312 aa12.72□□□□□ -0.37
RNF4-210ENST00000508235 PPP1R3CQ9UQK1 317 aa12.72□□□□□ -0.37
RNF4-210ENST00000508235 DYSFO75923 2080 aa12.71□□□□□ -0.37
RNF4-210ENST00000508235 CR1P17927 2039 aa12.71□□□□□ -0.37
RNF4-210ENST00000508235 LYNX1G3V0Z9 82 aa12.71□□□□□ -0.37
RNF4-210ENST00000508235 H0YL77 283 aa12.71□□□□□ -0.37
RNF4-210ENST00000508235 MAGEB4O15481 346 aaPredicted RBP12.71□□□□□ -0.37
RNF4-210ENST00000508235 MLNRO43193 412 aa12.71□□□□□ -0.37
RNF4-210ENST00000508235 PPIHO43447 177 aaKnown RBP12.71□□□□□ -0.37
RNF4-210ENST00000508235 LILRA1O75019 489 aa12.71□□□□□ -0.37
RNF4-210ENST00000508235 RPP14O95059 124 aaKnown RBP12.71□□□□□ -0.37
RNF4-210ENST00000508235 PNPP00491 289 aa12.71□□□□□ -0.37
RNF4-210ENST00000508235 IGHA1P01876 353 aa12.71□□□□□ -0.37
RNF4-210ENST00000508235 TTRP02766 147 aa12.71□□□□□ -0.37
RNF4-210ENST00000508235 HLA-DPB1P04440 258 aa12.71□□□□□ -0.37
RNF4-210ENST00000508235 LYNX1P0DP58 116 aa12.71□□□□□ -0.37
RNF4-210ENST00000508235 CA6P23280 308 aa12.71□□□□□ -0.37
RNF4-210ENST00000508235 MAP2K3P46734 347 aa12.71□□□□□ -0.37
RNF4-210ENST00000508235 CHN2P52757 468 aa12.71□□□□□ -0.37
RNF4-210ENST00000508235 MFGE8Q08431 387 aaPredicted RBP12.71□□□□□ -0.37
RNF4-210ENST00000508235 MED21Q13503 144 aa12.71□□□□□ -0.37
RNF4-210ENST00000508235 GALEQ14376 348 aa12.71□□□□□ -0.37
RNF4-210ENST00000508235 CDONQ4KMG0 1287 aa12.71□□□□□ -0.37
RNF4-210ENST00000508235 ELMOD2Q8IZ81 293 aa12.71□□□□□ -0.37
RNF4-210ENST00000508235 HAVCR2Q8TDQ0 301 aa12.71□□□□□ -0.37
RNF4-210ENST00000508235 ITLN1Q8WWA0 313 aa12.71□□□□□ -0.37
RNF4-210ENST00000508235 RAB1CQ92928 201 aa12.71□□□□□ -0.37
RNF4-210ENST00000508235 ERGIC1Q969X5 290 aa12.71□□□□□ -0.37
RNF4-210ENST00000508235 MEGF10Q96KG7 1140 aa12.71□□□□□ -0.37
RNF4-210ENST00000508235 SIGLEC11Q96RL6 698 aa12.71□□□□□ -0.37
RNF4-210ENST00000508235 ADAT1Q9BUB4 502 aaKnown RBP12.71□□□□□ -0.37
RNF4-210ENST00000508235 C14orf119Q9NWQ9 140 aa12.71□□□□□ -0.37
RNF4-210ENST00000508235 ANXA2P2A6NMY6 339 aa12.7□□□□□ -0.38
RNF4-210ENST00000508235 F5H5P2 479 aa12.7□□□□□ -0.38
RNF4-210ENST00000508235 FAM20BO75063 409 aa12.7□□□□□ -0.38
RNF4-210ENST00000508235 HEXAP06865 529 aa12.7□□□□□ -0.38
RNF4-210ENST00000508235 GNAO1P09471 354 aa12.7□□□□□ -0.38
RNF4-210ENST00000508235 DCKP27707 260 aa12.7□□□□□ -0.38
RNF4-210ENST00000508235 CD200P41217 278 aa12.7□□□□□ -0.38
RNF4-210ENST00000508235 GATA4P43694 442 aa12.7□□□□□ -0.38
RNF4-210ENST00000508235 AQP4P55087 323 aa12.7□□□□□ -0.38
RNF4-210ENST00000508235 MRPL28Q13084 256 aaKnown RBP12.7□□□□□ -0.38
RNF4-210ENST00000508235 SMN1Q16637 294 aaKnown RBP12.7□□□□□ -0.38
RNF4-210ENST00000508235 TP53I3Q53FA7 332 aa12.7□□□□□ -0.38
RNF4-210ENST00000508235 THAP5Q7Z6K1 395 aa12.7□□□□□ -0.38
RNF4-210ENST00000508235 LURAP1LQ8IV03 231 aa12.7□□□□□ -0.38
RNF4-210ENST00000508235 SYS1Q8N2H4 156 aa12.7□□□□□ -0.38
RNF4-210ENST00000508235 PLPP7Q8NBV4 271 aa12.7□□□□□ -0.38
RNF4-210ENST00000508235 CCDC54Q8NEL0 328 aa12.7□□□□□ -0.38
RNF4-210ENST00000508235 SEMA6DQ8NFY4 1073 aa12.7□□□□□ -0.38
RNF4-210ENST00000508235 OR52I1Q8NGK6 324 aa12.7□□□□□ -0.38
RNF4-210ENST00000508235 OR8S1Q8NH09 359 aa12.7□□□□□ -0.38
RNF4-210ENST00000508235 OR51E1Q8TCB6 317 aa12.7□□□□□ -0.38
RNF4-210ENST00000508235 LYZL4Q96KX0 146 aa12.7□□□□□ -0.38
RNF4-210ENST00000508235 ALG8Q9BVK2 526 aa12.7□□□□□ -0.38
RNF4-210ENST00000508235 PAPOLGQ9BWT3 736 aaKnown RBP12.7□□□□□ -0.38
RNF4-210ENST00000508235 JAM3Q9BX67 310 aa12.7□□□□□ -0.38
RNF4-210ENST00000508235 FGF20Q9NP95 211 aaPredicted RBP12.7□□□□□ -0.38
RNF4-210ENST00000508235 G6PC2Q9NQR9 355 aa12.7□□□□□ -0.38
RNF4-210ENST00000508235 GPR84Q9NQS5 396 aa12.7□□□□□ -0.38
RNF4-210ENST00000508235 TMEM106BQ9NUM4 274 aa12.7□□□□□ -0.38
RNF4-210ENST00000508235 MPC1Q9Y5U8 109 aa12.7□□□□□ -0.38
RNF4-210ENST00000508235 ITPR3Q14573 2671 aa12.7□□□□□ -0.38
RNF4-210ENST00000508235 CSMD1Q96PZ7 3565 aa12.69□□□□□ -0.38
RNF4-210ENST00000508235 A0A096LNT2 108 aa12.69□□□□□ -0.38
RNF4-210ENST00000508235 LRRC30A6NM36 301 aa12.69□□□□□ -0.38
RNF4-210ENST00000508235 DHRS3O75911 302 aa12.69□□□□□ -0.38
RNF4-210ENST00000508235 CST4P01036 141 aa12.69□□□□□ -0.38
RNF4-210ENST00000508235 IGLV3-1P01715 115 aa12.69□□□□□ -0.38
RNF4-210ENST00000508235 ZNF12P17014 697 aa12.69□□□□□ -0.38
RNF4-210ENST00000508235 MYL12AP19105 171 aa12.69□□□□□ -0.38
RNF4-210ENST00000508235 CSNK2BP67870 215 aa12.69□□□□□ -0.38
RNF4-210ENST00000508235 RIPPLY1Q0D2K3 151 aa12.69□□□□□ -0.38
RNF4-210ENST00000508235 ZNF181Q2M3W8 571 aa12.69□□□□□ -0.38
RNF4-210ENST00000508235 C6orf52Q5T4I8 152 aa12.69□□□□□ -0.38
RNF4-210ENST00000508235 ZBTB37Q5TC79 503 aa12.69□□□□□ -0.38
RNF4-210ENST00000508235 LHFPL3Q86UP9 236 aa12.69□□□□□ -0.38
RNF4-210ENST00000508235 CATSPERDQ86XM0 798 aa12.69□□□□□ -0.38
RNF4-210ENST00000508235 C1orf87Q8N0U7 546 aa12.69□□□□□ -0.38
RNF4-210ENST00000508235 FBLIM1Q8WUP2 373 aa12.69□□□□□ -0.38
RNF4-210ENST00000508235 RORBQ92753 470 aa12.69□□□□□ -0.38
RNF4-210ENST00000508235 HPS1Q92902 700 aa12.69□□□□□ -0.38
RNF4-210ENST00000508235 C4orf36Q96KX1 117 aa12.69□□□□□ -0.38
RNF4-210ENST00000508235 GCM1Q9NP62 436 aa12.69□□□□□ -0.38
RNF4-210ENST00000508235 ACOXLQ9NUZ1 547 aa12.69□□□□□ -0.38
RNF4-210ENST00000508235 ERVK13-1Q9NX77 482 aa12.69□□□□□ -0.38
RNF4-210ENST00000508235 MYRFQ9Y2G1 1151 aa12.69□□□□□ -0.38
RNF4-210ENST00000508235 RRP15Q9Y3B9 282 aaKnown RBP12.69□□□□□ -0.38
RNF4-210ENST00000508235 IGHV4-61A0A0C4DH41 118 aa12.68□□□□□ -0.38
RNF4-210ENST00000508235 ZNF816-ZNF321PA0A0X1KG74 233 aa12.68□□□□□ -0.38
RNF4-210ENST00000508235 EFCAB10A6NFE3 127 aa12.68□□□□□ -0.38
RNF4-210ENST00000508235 J3QLW9 94 aa12.68□□□□□ -0.38
RNF4-210ENST00000508235 RPSAP08865 295 aaKnown RBP12.68□□□□□ -0.38
RNF4-210ENST00000508235 HTR1AP08908 422 aa12.68□□□□□ -0.38
RNF4-210ENST00000508235 UBCP0CG48 685 aaKnown RBP12.68□□□□□ -0.38
RNF4-210ENST00000508235 IRF2P14316 349 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms