RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 OR4D6Q8NGJ1 314 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 OR51A2Q8NGJ7 313 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 OR1J1Q8NGS3 322 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 OR2AJ1Q8NGZ0 328 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 MFSD8Q8NHS3 518 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 CCL4L1Q8NHW4 92 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 FNDC9Q8TBE3 224 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 ST7LQ8TDW4 575 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 SLC37A2Q8TED4 501 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 ZNF296Q8WUU4 475 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 RNF133Q8WVZ7 376 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 ST8SIA1Q92185 356 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 DAZLQ92904 295 aaKnown RBP4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 TRIM43Q96BQ3 446 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 FGGYQ96C11 551 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 DDIT4LQ96D03 193 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 MALSU1Q96EH3 234 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 MVB12AQ96EY5 273 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 MMABQ96EY8 250 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 C14orf79Q96F83 325 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 CPNE2Q96FN4 548 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 TMEM41AQ96HV5 264 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 ZNF285Q96NJ3 590 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 ADOQ96SZ5 270 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 S100A13Q99584 98 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 CDCA3Q99618 268 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 GAL3ST1Q99999 423 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 CRB3Q9BUF7 120 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 TMEM59Q9BXS4 323 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 PBOV1Q9GZY1 135 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 NXF5Q9H1B4 397 aaKnown RBP4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 TMPRSS5Q9H3S3 457 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 ZMAT3Q9HA38 289 aaKnown RBP4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 RPS10P5Q9NQ39 176 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 PNO1Q9NRX1 252 aaKnown RBP4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 FAM206AQ9NX38 181 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 SRPK3Q9UPE1 567 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 B3GALT5Q9Y2C3 310 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 MRPS28Q9Y2Q9 187 aaKnown RBP4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 COA3Q9Y2R0 106 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 NOSIPQ9Y314 301 aaKnown RBP4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 TIMM10BQ9Y5J6 103 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 SCN3AQ9NY46 2000 aa4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 PRRC2BQ5JSZ5 2229 aaKnown RBP4.41□□□□□ -1.7
HMGB3P16-201ENST00000508037 A0A096LPE4 126 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 A0A1B0GW64 132 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 A0A1W2PPZ6 126 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 MEX3AA1L020 520 aaKnown RBP4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 LINC01553A4QN01 128 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 BTBD17A6NE02 478 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 LILRA5A6NI73 299 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 C4orf47A7E2U8 309 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 RHPN2P1A8MT19 583 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 ZNF878C9JN71 531 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 E5RGE8 158 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 K7EQS6 105 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 AP4M1O00189 453 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 SIGLEC5O15389 551 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 RRP8O43159 456 aaKnown RBP4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 SSX5O60225 188 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 TSPAN2O60636 221 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 CDC14BO60729 498 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 KLF8O95600 359 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 MPIG6BO95866 241 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 GPANK1O95872 356 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 CLPSP04118 112 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 SFTPBP07988 381 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 FCGR3AP08637 254 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 ACAA1P09110 424 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 GNB3P16520 340 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 RAB5AP20339 215 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 NME2P22392 152 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 CPT2P23786 658 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 CHATP28329 748 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 CD80P33681 288 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 EIF2S3P41091 472 aaKnown RBP4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 APOBEC1P41238 236 aaKnown RBP4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 RPS27P42677 84 aaKnown RBP4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 LPAR6P43657 344 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 KCNJ3P48549 501 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 NPY4RP50391 375 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 CCR5P51681 352 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 STARD6P59095 220 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 S100A10P60903 97 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 RAB2AP61019 212 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 SNRPEP62304 92 aaKnown RBP4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 HSD11B2P80365 405 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 MRPS21P82921 87 aaKnown RBP4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 HSF1Q00613 529 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 SIGLEC14Q08ET2 396 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 IL15RAQ13261 267 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 UNC119Q13432 240 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 HABP2Q14520 560 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 SLC9A3R2Q15599 337 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 DEFB110Q30KQ9 67 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 CHRFAM7AQ494W8 412 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 TMEM196Q5HYL7 178 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 THEM4Q5T1C6 240 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 GPR157Q5UAW9 335 aa4.4□□□□□ -1.71
HMGB3P16-201ENST00000508037 TMEM268Q5VZI3 342 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms