RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 BTN1A1Q13410 526 aa6.98□□□□□ -1.29
SCN1A-207ENST00000507401 CAMK2DQ13557 499 aa6.98□□□□□ -1.29
SCN1A-207ENST00000507401 IL18Q14116 193 aa6.98□□□□□ -1.29
SCN1A-207ENST00000507401 OR1Q1Q15612 314 aa6.98□□□□□ -1.29
SCN1A-207ENST00000507401 SNAPC1Q16533 368 aa6.98□□□□□ -1.29
SCN1A-207ENST00000507401 ZNF57Q68EA5 555 aaPredicted RBP6.98□□□□□ -1.29
SCN1A-207ENST00000507401 RGS7BPQ6MZT1 257 aaPredicted RBP6.98□□□□□ -1.29
SCN1A-207ENST00000507401 SLC27A4Q6P1M0 643 aa6.98□□□□□ -1.29
SCN1A-207ENST00000507401 NIPAL3Q6P499 406 aa6.98□□□□□ -1.29
SCN1A-207ENST00000507401 ANKRD16Q6P6B7 361 aa6.98□□□□□ -1.29
SCN1A-207ENST00000507401 ZNF613Q6PF04 617 aa6.98□□□□□ -1.29
SCN1A-207ENST00000507401 KLHL24Q6TFL4 600 aa6.98□□□□□ -1.29
SCN1A-207ENST00000507401 BTN2A1Q7KYR7 527 aa6.98□□□□□ -1.29
SCN1A-207ENST00000507401 RANBP3LQ86VV4 465 aaPredicted RBP6.98□□□□□ -1.29
SCN1A-207ENST00000507401 TPRA1Q86W33 373 aa6.98□□□□□ -1.29
SCN1A-207ENST00000507401 PTOV1Q86YD1 416 aa6.98□□□□□ -1.29
SCN1A-207ENST00000507401 PDZD9Q8IXQ8 264 aa6.98□□□□□ -1.29
SCN1A-207ENST00000507401 FBXL14Q8N1E6 418 aa6.98□□□□□ -1.29
SCN1A-207ENST00000507401 MUC15Q8N387 334 aa6.98□□□□□ -1.29
SCN1A-207ENST00000507401 MS4A15Q8N5U1 240 aa6.98□□□□□ -1.29
SCN1A-207ENST00000507401 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.98□□□□□ -1.29
SCN1A-207ENST00000507401 BVESQ8NE79 360 aa6.98□□□□□ -1.29
SCN1A-207ENST00000507401 OR1M1Q8NGA1 313 aa6.98□□□□□ -1.29
SCN1A-207ENST00000507401 OR6M1Q8NGM8 313 aa6.98□□□□□ -1.29
SCN1A-207ENST00000507401 OR1K1Q8NGR3 316 aa6.98□□□□□ -1.29
SCN1A-207ENST00000507401 BCL2L2Q92843 193 aaPredicted RBP6.98□□□□□ -1.29
SCN1A-207ENST00000507401 RFKQ969G6 155 aa6.98□□□□□ -1.29
SCN1A-207ENST00000507401 TAAR8Q969N4 342 aa6.98□□□□□ -1.29
SCN1A-207ENST00000507401 SLC41A3Q96GZ6 507 aa6.98□□□□□ -1.29
SCN1A-207ENST00000507401 ADAD1Q96M93 576 aaKnown RBP6.98□□□□□ -1.29
SCN1A-207ENST00000507401 RBP7Q96R05 134 aa6.98□□□□□ -1.29
SCN1A-207ENST00000507401 OR5M11Q96RB7 305 aa6.98□□□□□ -1.29
SCN1A-207ENST00000507401 KATNB1Q9BVA0 655 aa6.98□□□□□ -1.29
SCN1A-207ENST00000507401 IFT27Q9BW83 186 aa6.98□□□□□ -1.29
SCN1A-207ENST00000507401 JAM3Q9BX67 310 aa6.98□□□□□ -1.29
SCN1A-207ENST00000507401 BEX2Q9BXY8 128 aa6.98□□□□□ -1.29
SCN1A-207ENST00000507401 SLC25A32Q9H2D1 315 aa6.98□□□□□ -1.29
SCN1A-207ENST00000507401 CYSLTR2Q9NS75 346 aa6.98□□□□□ -1.29
SCN1A-207ENST00000507401 CBLN4Q9NTU7 201 aa6.98□□□□□ -1.29
SCN1A-207ENST00000507401 COPS3Q9UNS2 423 aa6.98□□□□□ -1.29
SCN1A-207ENST00000507401 ANGPT4Q9Y264 503 aa6.98□□□□□ -1.29
SCN1A-207ENST00000507401 IGKV1D-42A0A075B6H8 117 aa6.97□□□□□ -1.29
SCN1A-207ENST00000507401 LOC100289279A0A1B0GTE1 492 aa6.97□□□□□ -1.29
SCN1A-207ENST00000507401 A0A1W2PR80 420 aa6.97□□□□□ -1.29
SCN1A-207ENST00000507401 MCIDASD6RGH6 385 aa6.97□□□□□ -1.29
SCN1A-207ENST00000507401 MS4A18H0YCH9 400 aa6.97□□□□□ -1.29
SCN1A-207ENST00000507401 H7C417 338 aa6.97□□□□□ -1.29
SCN1A-207ENST00000507401 M0R1B8 84 aa6.97□□□□□ -1.29
SCN1A-207ENST00000507401 SMAD7O15105 426 aaKnown RBP6.97□□□□□ -1.29
SCN1A-207ENST00000507401 CTDSPLO15194 276 aa6.97□□□□□ -1.29
SCN1A-207ENST00000507401 TSC22D2O75157 780 aa6.97□□□□□ -1.29
SCN1A-207ENST00000507401 UPK3AO75631 287 aa6.97□□□□□ -1.29
SCN1A-207ENST00000507401 RP2O75695 350 aa6.97□□□□□ -1.29
SCN1A-207ENST00000507401 MT-ATP6P00846 226 aa6.97□□□□□ -1.29
SCN1A-207ENST00000507401 IGHV4-39P01824 125 aa6.97□□□□□ -1.29
SCN1A-207ENST00000507401 GRPRP30550 384 aa6.97□□□□□ -1.29
SCN1A-207ENST00000507401 CDKN1AP38936 164 aa6.97□□□□□ -1.29
SCN1A-207ENST00000507401 PITPNBP48739 271 aa6.97□□□□□ -1.29
SCN1A-207ENST00000507401 MEOX2P50222 304 aa6.97□□□□□ -1.29
SCN1A-207ENST00000507401 FABP6P51161 128 aa6.97□□□□□ -1.29
SCN1A-207ENST00000507401 CDH12P55289 794 aa6.97□□□□□ -1.29
SCN1A-207ENST00000507401 CLDN17P56750 224 aa6.97□□□□□ -1.29
SCN1A-207ENST00000507401 UBE2NP61088 152 aaKnown RBP6.97□□□□□ -1.29
SCN1A-207ENST00000507401 MRPS10P82664 201 aaKnown RBP6.97□□□□□ -1.29
SCN1A-207ENST00000507401 PTGES3Q15185 160 aaKnown RBP6.97□□□□□ -1.29
SCN1A-207ENST00000507401 RAB35Q15286 201 aa6.97□□□□□ -1.29
SCN1A-207ENST00000507401 FCN2Q15485 313 aa6.97□□□□□ -1.29
SCN1A-207ENST00000507401 MICBQ29980 383 aa6.97□□□□□ -1.29
SCN1A-207ENST00000507401 MS4A18Q3C1V0 323 aa6.97□□□□□ -1.29
SCN1A-207ENST00000507401 C9orf135Q5VTT2 229 aa6.97□□□□□ -1.29
SCN1A-207ENST00000507401 C12orf73Q69YU5 71 aa6.97□□□□□ -1.29
SCN1A-207ENST00000507401 C11orf71Q6IPW1 123 aa6.97□□□□□ -1.29
SCN1A-207ENST00000507401 CORO6Q6QEF8 472 aa6.97□□□□□ -1.29
SCN1A-207ENST00000507401 NHLRC1Q6VVB1 395 aa6.97□□□□□ -1.29
SCN1A-207ENST00000507401 PXKQ7Z7A4 578 aa6.97□□□□□ -1.29
SCN1A-207ENST00000507401 COMTD1Q86VU5 262 aa6.97□□□□□ -1.29
SCN1A-207ENST00000507401 SKA3Q8IX90 412 aa6.97□□□□□ -1.29
SCN1A-207ENST00000507401 KDM8Q8N371 416 aa6.97□□□□□ -1.29
SCN1A-207ENST00000507401 OR4D10Q8NGI6 311 aa6.97□□□□□ -1.29
SCN1A-207ENST00000507401 TEX47Q8TBZ9 253 aa6.97□□□□□ -1.29
SCN1A-207ENST00000507401 MARC2Q969Z3 335 aa6.97□□□□□ -1.29
SCN1A-207ENST00000507401 ORAI1Q96D31 301 aa6.97□□□□□ -1.29
SCN1A-207ENST00000507401 LRR1Q96L50 414 aa6.97□□□□□ -1.29
SCN1A-207ENST00000507401 HS6ST2Q96MM7 605 aa6.97□□□□□ -1.29
SCN1A-207ENST00000507401 C12orf57Q99622 126 aa6.97□□□□□ -1.29
SCN1A-207ENST00000507401 ARHGDIGQ99819 225 aa6.97□□□□□ -1.29
SCN1A-207ENST00000507401 SEC22CQ9BRL7 303 aa6.97□□□□□ -1.29
SCN1A-207ENST00000507401 RHNO1Q9BSD3 238 aa6.97□□□□□ -1.29
SCN1A-207ENST00000507401 MRI1Q9BV20 369 aa6.97□□□□□ -1.29
SCN1A-207ENST00000507401 DPCDQ9BVM2 203 aaPredicted RBP6.97□□□□□ -1.29
SCN1A-207ENST00000507401 C1QTNF6Q9BXI9 259 aa6.97□□□□□ -1.29
SCN1A-207ENST00000507401 REG4Q9BYZ8 158 aa6.97□□□□□ -1.29
SCN1A-207ENST00000507401 ABCG5Q9H222 651 aa6.97□□□□□ -1.29
SCN1A-207ENST00000507401 GPN1Q9HCN4 374 aaPredicted RBP6.97□□□□□ -1.29
SCN1A-207ENST00000507401 NDUFAF4Q9P032 175 aa6.97□□□□□ -1.29
SCN1A-207ENST00000507401 B3GAT1Q9P2W7 334 aa6.97□□□□□ -1.29
SCN1A-207ENST00000507401 ZNF222Q9UK12 451 aa6.97□□□□□ -1.29
SCN1A-207ENST00000507401 ENPP4Q9Y6X5 453 aa6.97□□□□□ -1.29
SCN1A-207ENST00000507401 TLN2Q9Y4G6 2542 aa6.96□□□□□ -1.29
SCN1A-207ENST00000507401 HIVEP2P31629 2446 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms