RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 CDK9P50750 372 aaKnown RBP1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 UGT2B15P54855 530 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 GFERP55789 205 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 NUP107P57740 925 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 RGS8P57771 180 aaPredicted RBP1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 TAS2R41P59536 307 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 CDC42P60953 191 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 CCL7P80098 99 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 IGLV3-21P80748 117 aaPredicted RBP1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 VLDLRP98155 873 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 SPIBQ01892 262 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 FUT7Q11130 342 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 TRAM2Q15035 370 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 ZNF141Q15928 474 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 SYPL1Q16563 259 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 DUSP7Q16829 419 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 ANKDD1AQ495B1 522 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 KCTD21Q4G0X4 260 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 NKAIN1Q4KMZ8 207 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 TRMT12Q53H54 448 aaKnown RBP1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 SFT2D3Q587I9 215 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 DCST2Q5T1A1 773 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 C6orf52Q5T4I8 152 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 FHL5Q5TD97 284 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 MLIPQ5VWP3 458 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 MEDAGQ5VYS4 303 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 KDM4DQ6B0I6 523 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 PLBD1Q6P4A8 553 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 GUSBP11Q6P575 273 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 FAHD1Q6P587 224 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 ULK3Q6PHR2 472 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 UGT2A3Q6UWM9 527 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 CASP12Q6UXS9 341 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 HSDL2Q6YN16 418 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 ADAMTSL5Q6ZMM2 481 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 VTCN1Q7Z7D3 282 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 GRAMD2AQ8IUY3 354 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 MISPQ8IVT2 679 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 OFCC1Q8IZS5 231 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 CYP4Z2PQ8N1L4 340 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 ZNF619Q8N2I2 560 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 C10orf111Q8N326 155 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 ZNF786Q8N393 782 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 FAM86B1Q8N7N1 296 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 OR7G2Q8NG99 324 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 OR10G2Q8NGC3 310 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 OR52R1Q8NGF1 315 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 OR5T3Q8NGG3 340 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 OR5D16Q8NGK9 328 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 OR8K3Q8NH51 312 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 GNPDA2Q8TDQ7 276 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 DNAJA4Q8WW22 397 aaPredicted RBP1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 GTSF1Q8WW33 167 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 CYGBQ8WWM9 190 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 OSTF1Q92882 214 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 CDS1Q92903 461 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 RAB8BQ92930 207 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 MYDGFQ969H8 173 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 TAMM41Q96BW9 452 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 DGCR14Q96DF8 476 aaKnown RBP1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 C16orf58Q96GQ5 468 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 C7orf34Q96L11 122 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 PRRC1Q96M27 445 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 SLC38A2Q96QD8 506 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 SDF2Q99470 211 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 NRTNQ99748 197 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 SLC29A1Q99808 456 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 DDA1Q9BW61 102 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 MRPS26Q9BYN8 205 aaKnown RBP1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 SLC19A3Q9BZV2 496 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 UCK2Q9BZX2 261 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 AICDAQ9GZX7 198 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 SYNDIG1Q9H7V2 258 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 NMNAT1Q9HAN9 279 aaPredicted RBP1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 NTN4Q9HB63 628 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 TMEM27Q9HBJ8 222 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 AMBNQ9NP70 447 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 CCNB1IP1Q9NPC3 277 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 TMEM9BQ9NQ34 198 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 SDHAF3Q9NRP4 125 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 UBQLN4Q9NRR5 601 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 PNO1Q9NRX1 252 aaKnown RBP1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 ACER3Q9NUN7 267 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 CLN6Q9NWW5 311 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 IMPAD1Q9NX62 359 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 SLC39A1Q9NY26 324 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 MAT2BQ9NZL9 334 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 DHRS4-AS1Q9P1J3 65 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 RPS6KB2Q9UBS0 482 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 B4GALT7Q9UBV7 327 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 ZNF107Q9UII5 783 aaPredicted RBP1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 SLC35A3Q9Y2D2 325 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 KLHDC2Q9Y2U9 406 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 SLC6A5Q9Y345 797 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 MRPS2Q9Y399 296 aaKnown RBP1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 NEUROG3Q9Y4Z2 214 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 GMPPBQ9Y5P6 360 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 SLCO1B1Q9Y6L6 691 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 U3KQV3 271 aa1.94□□□□□ -2.1
TOPBP1-205ENST00000506779 V9GYQ6 96 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms