RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 C20orf85Q9H1P6 137 aa18.64■□□□□ 0.58
UBE2D3-216ENST00000503742 SCPEP1Q9HB40 452 aa18.64■□□□□ 0.58
UBE2D3-216ENST00000503742 DLL3Q9NYJ7 618 aa18.64■□□□□ 0.58
UBE2D3-216ENST00000503742 FREM1Q5H8C1 2179 aa18.64■□□□□ 0.57
UBE2D3-216ENST00000503742 METTL21EPA6NDL7 271 aa18.64■□□□□ 0.57
UBE2D3-216ENST00000503742 MTRF1O75570 445 aaKnown RBP18.64■□□□□ 0.57
UBE2D3-216ENST00000503742 FARS2O95363 451 aaKnown RBP18.64■□□□□ 0.57
UBE2D3-216ENST00000503742 CSF1P09603 554 aa18.64■□□□□ 0.57
UBE2D3-216ENST00000503742 HTR5AP47898 357 aa18.64■□□□□ 0.57
UBE2D3-216ENST00000503742 CD83Q01151 205 aa18.64■□□□□ 0.57
UBE2D3-216ENST00000503742 RTP5Q14D33 572 aa18.64■□□□□ 0.57
UBE2D3-216ENST00000503742 RSPO4Q2I0M5 234 aaPredicted RBP18.64■□□□□ 0.57
UBE2D3-216ENST00000503742 GSG1Q2KHT4 349 aa18.64■□□□□ 0.57
UBE2D3-216ENST00000503742 PP6455Q8WZ26 134 aa18.64■□□□□ 0.57
UBE2D3-216ENST00000503742 CHST5Q9GZS9 411 aa18.64■□□□□ 0.57
UBE2D3-216ENST00000503742 MCUBQ9NWR8 336 aa18.64■□□□□ 0.57
UBE2D3-216ENST00000503742 WIPF3A6NGB9 483 aa18.63■□□□□ 0.57
UBE2D3-216ENST00000503742 HCKP08631 526 aa18.63■□□□□ 0.57
UBE2D3-216ENST00000503742 ARF1P84077 181 aaKnown RBP18.63■□□□□ 0.57
UBE2D3-216ENST00000503742 CLN3Q13286 438 aa18.63■□□□□ 0.57
UBE2D3-216ENST00000503742 FAAP20Q6NZ36 180 aa18.63■□□□□ 0.57
UBE2D3-216ENST00000503742 CRIP3Q6Q6R5 217 aa18.63■□□□□ 0.57
UBE2D3-216ENST00000503742 OR2W3Q7Z3T1 314 aa18.63■□□□□ 0.57
UBE2D3-216ENST00000503742 CDH24Q86UP0 819 aa18.63■□□□□ 0.57
UBE2D3-216ENST00000503742 TCTE3Q8IZS6 198 aa18.63■□□□□ 0.57
UBE2D3-216ENST00000503742 BEX2Q9BXY8 128 aa18.63■□□□□ 0.57
UBE2D3-216ENST00000503742 TP63Q9H3D4 680 aaPredicted RBP18.63■□□□□ 0.57
UBE2D3-216ENST00000503742 MRPS28Q9Y2Q9 187 aaKnown RBP18.63■□□□□ 0.57
UBE2D3-216ENST00000503742 DHRS7CA6NNS2 312 aa18.62■□□□□ 0.57
UBE2D3-216ENST00000503742 LPLP06858 475 aa18.62■□□□□ 0.57
UBE2D3-216ENST00000503742 FAHP16930 419 aa18.62■□□□□ 0.57
UBE2D3-216ENST00000503742 GLIPR1L1Q6UWM5 242 aa18.62■□□□□ 0.57
UBE2D3-216ENST00000503742 ACBD4Q8NC06 268 aa18.62■□□□□ 0.57
UBE2D3-216ENST00000503742 AQP3Q92482 292 aa18.62■□□□□ 0.57
UBE2D3-216ENST00000503742 FAM46BQ96A09 425 aa18.62■□□□□ 0.57
UBE2D3-216ENST00000503742 DMRTB1Q96MA1 342 aa18.62■□□□□ 0.57
UBE2D3-216ENST00000503742 PIGLQ9Y2B2 252 aa18.62■□□□□ 0.57
UBE2D3-216ENST00000503742 ZNF587BE7ETH6 402 aa18.62■□□□□ 0.57
UBE2D3-216ENST00000503742 OR3A4PP47883 348 aa18.62■□□□□ 0.57
UBE2D3-216ENST00000503742 UBE2V2Q15819 145 aa18.62■□□□□ 0.57
UBE2D3-216ENST00000503742 ZFP69Q49AA0 526 aa18.62■□□□□ 0.57
UBE2D3-216ENST00000503742 CHMP1BQ7LBR1 199 aa18.62■□□□□ 0.57
UBE2D3-216ENST00000503742 APH1AQ96BI3 265 aa18.62■□□□□ 0.57
UBE2D3-216ENST00000503742 NUDT16L1Q9BRJ7 211 aaKnown RBP18.62■□□□□ 0.57
UBE2D3-216ENST00000503742 IRF2BPLQ9H1B7 796 aa18.62■□□□□ 0.57
UBE2D3-216ENST00000503742 SDHBP21912 280 aa18.61■□□□□ 0.57
UBE2D3-216ENST00000503742 FAUP35544 74 aaKnown RBP18.61■□□□□ 0.57
UBE2D3-216ENST00000503742 ACTBP60709 375 aa18.61■□□□□ 0.57
UBE2D3-216ENST00000503742 ACTG1P63261 375 aa18.61■□□□□ 0.57
UBE2D3-216ENST00000503742 PMP22Q01453 160 aa18.61■□□□□ 0.57
UBE2D3-216ENST00000503742 LINC00303Q3SY05 128 aa18.61■□□□□ 0.57
UBE2D3-216ENST00000503742 ZNF260Q3ZCT1 412 aa18.61■□□□□ 0.57
UBE2D3-216ENST00000503742 OR4C16Q8NGL9 310 aa18.61■□□□□ 0.57
UBE2D3-216ENST00000503742 GIMAP1Q8WWP7 306 aa18.61■□□□□ 0.57
UBE2D3-216ENST00000503742 REEP6Q96HR9 211 aa18.61■□□□□ 0.57
UBE2D3-216ENST00000503742 RNF170Q96K19 258 aa18.61■□□□□ 0.57
UBE2D3-216ENST00000503742 MEIS3P1A6NDR6 274 aa18.61■□□□□ 0.57
UBE2D3-216ENST00000503742 PEX14O75381 377 aa18.61■□□□□ 0.57
UBE2D3-216ENST00000503742 SCGNO76038 276 aa18.61■□□□□ 0.57
UBE2D3-216ENST00000503742 LCATP04180 440 aa18.61■□□□□ 0.57
UBE2D3-216ENST00000503742 GSK3AP49840 483 aa18.61■□□□□ 0.57
UBE2D3-216ENST00000503742 FOXG1P55316 489 aaPredicted RBP18.61■□□□□ 0.57
UBE2D3-216ENST00000503742 NUFIP2Q7Z417 695 aaKnown RBP18.61■□□□□ 0.57
UBE2D3-216ENST00000503742 OR2AE1Q8NHA4 323 aa18.61■□□□□ 0.57
UBE2D3-216ENST00000503742 OR51J1Q9H342 316 aa18.61■□□□□ 0.57
UBE2D3-216ENST00000503742 ATPIF1Q9UII2 106 aa18.61■□□□□ 0.57
UBE2D3-216ENST00000503742 ELF5Q9UKW6 265 aaPredicted RBP18.61■□□□□ 0.57
UBE2D3-216ENST00000503742 FLVCR2Q9UPI3 526 aa18.61■□□□□ 0.57
UBE2D3-216ENST00000503742 ZNF891A8MT65 544 aaPredicted RBP18.6■□□□□ 0.57
UBE2D3-216ENST00000503742 IGHG3P01860 377 aa18.6■□□□□ 0.57
UBE2D3-216ENST00000503742 AKAIN1P0CW23 69 aa18.6■□□□□ 0.57
UBE2D3-216ENST00000503742 ACKR3P25106 362 aa18.6■□□□□ 0.57
UBE2D3-216ENST00000503742 ALDH3B1P43353 468 aa18.6■□□□□ 0.57
UBE2D3-216ENST00000503742 KISS1Q15726 138 aa18.6■□□□□ 0.57
UBE2D3-216ENST00000503742 PABPC1L2AQ5JQF8 200 aa18.6■□□□□ 0.57
UBE2D3-216ENST00000503742 MCEMP1Q8IX19 187 aa18.6■□□□□ 0.57
UBE2D3-216ENST00000503742 ZNF101Q8IZC7 436 aa18.6■□□□□ 0.57
UBE2D3-216ENST00000503742 SEMA6DQ8NFY4 1073 aa18.6■□□□□ 0.57
UBE2D3-216ENST00000503742 ZMAT3Q9HA38 289 aaKnown RBP18.6■□□□□ 0.57
UBE2D3-216ENST00000503742 NKIRAS2Q9NYR9 191 aa18.6■□□□□ 0.57
UBE2D3-216ENST00000503742 ZNF391Q9UJN7 358 aa18.6■□□□□ 0.57
UBE2D3-216ENST00000503742 RIF1Q5UIP0 2472 aaKnown RBP18.6■□□□□ 0.57
UBE2D3-216ENST00000503742 CEACAM4O75871 244 aa18.59■□□□□ 0.57
UBE2D3-216ENST00000503742 NDUFB6O95139 128 aa18.59■□□□□ 0.57
UBE2D3-216ENST00000503742 TGM6O95932 706 aa18.59■□□□□ 0.57
UBE2D3-216ENST00000503742 MELTFP08582 738 aa18.59■□□□□ 0.57
UBE2D3-216ENST00000503742 UBBP0CG47 229 aa18.59■□□□□ 0.57
UBE2D3-216ENST00000503742 GTF2F2P13984 249 aa18.59■□□□□ 0.57
UBE2D3-216ENST00000503742 SLC7A5P1Q8MH63 180 aa18.59■□□□□ 0.57
UBE2D3-216ENST00000503742 TMEM104Q8NE00 496 aa18.59■□□□□ 0.57
UBE2D3-216ENST00000503742 CPEB3Q8NE35 698 aaKnown RBP18.59■□□□□ 0.57
UBE2D3-216ENST00000503742 OR4D10Q8NGI6 311 aa18.59■□□□□ 0.57
UBE2D3-216ENST00000503742 KCNG3Q8TAE7 436 aa18.59■□□□□ 0.57
UBE2D3-216ENST00000503742 LPAR5Q9H1C0 372 aa18.59■□□□□ 0.57
UBE2D3-216ENST00000503742 MED28Q9H204 178 aa18.59■□□□□ 0.57
UBE2D3-216ENST00000503742 ZNF107Q9UII5 783 aaPredicted RBP18.59■□□□□ 0.57
UBE2D3-216ENST00000503742 TMEM235A6NFC5 223 aa18.59■□□□□ 0.57
UBE2D3-216ENST00000503742 ICMTO60725 284 aa18.59■□□□□ 0.57
UBE2D3-216ENST00000503742 TNK1Q13470 666 aa18.59■□□□□ 0.57
UBE2D3-216ENST00000503742 FCN2Q15485 313 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms