RNA–Protein interactions for RNA: ENST00000503638.1

PGGT1B-204, Transcript of protein geranylgeranyltransferase type I subunit beta, humanhuman

TSL 3

Gene PGGT1B, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGGT1B-204ENST00000503638 LIMS3P0CW19 117 aa11.42□□□□□ -0.58
PGGT1B-204ENST00000503638 LIMS4P0CW20 117 aa11.42□□□□□ -0.58
PGGT1B-204ENST00000503638 HOXB4P17483 251 aaPredicted RBP11.42□□□□□ -0.58
PGGT1B-204ENST00000503638 CA6P23280 308 aa11.42□□□□□ -0.58
PGGT1B-204ENST00000503638 MAGEB1P43366 347 aa11.42□□□□□ -0.58
PGGT1B-204ENST00000503638 GSK3AP49840 483 aa11.42□□□□□ -0.58
PGGT1B-204ENST00000503638 MMP15P51511 669 aa11.42□□□□□ -0.58
PGGT1B-204ENST00000503638 EFNA4P52798 201 aa11.42□□□□□ -0.58
PGGT1B-204ENST00000503638 TNFAIP6P98066 277 aaPredicted RBP11.42□□□□□ -0.58
PGGT1B-204ENST00000503638 MVKQ03426 396 aa11.42□□□□□ -0.58
PGGT1B-204ENST00000503638 OR8G1Q15617 311 aa11.42□□□□□ -0.58
PGGT1B-204ENST00000503638 PCGF3Q3KNV8 242 aa11.42□□□□□ -0.58
PGGT1B-204ENST00000503638 WDR38Q5JTN6 314 aa11.42□□□□□ -0.58
PGGT1B-204ENST00000503638 ZNF684Q5T5D7 378 aa11.42□□□□□ -0.58
PGGT1B-204ENST00000503638 OR2G6Q5TZ20 316 aa11.42□□□□□ -0.58
PGGT1B-204ENST00000503638 KLBQ86Z14 1044 aa11.42□□□□□ -0.58
PGGT1B-204ENST00000503638 SYS1Q8N2H4 156 aa11.42□□□□□ -0.58
PGGT1B-204ENST00000503638 ZNF676Q8N7Q3 588 aa11.42□□□□□ -0.58
PGGT1B-204ENST00000503638 OR13G1Q8NGZ3 307 aa11.42□□□□□ -0.58
PGGT1B-204ENST00000503638 NEU4Q8WWR8 484 aaPredicted RBP11.42□□□□□ -0.58
PGGT1B-204ENST00000503638 GATAD2BQ8WXI9 593 aa11.42□□□□□ -0.58
PGGT1B-204ENST00000503638 PELI1Q96FA3 418 aa11.42□□□□□ -0.58
PGGT1B-204ENST00000503638 ADAT1Q9BUB4 502 aaKnown RBP11.42□□□□□ -0.58
PGGT1B-204ENST00000503638 REPIN1Q9BWE0 567 aaKnown RBP11.42□□□□□ -0.58
PGGT1B-204ENST00000503638 PAPOLGQ9BWT3 736 aaKnown RBP11.42□□□□□ -0.58
PGGT1B-204ENST00000503638 EGLN1Q9GZT9 426 aa11.42□□□□□ -0.58
PGGT1B-204ENST00000503638 SAP30LQ9HAJ7 183 aa11.42□□□□□ -0.58
PGGT1B-204ENST00000503638 PLEKHA1Q9HB21 404 aa11.42□□□□□ -0.58
PGGT1B-204ENST00000503638 ZNF701Q9NV72 531 aaPredicted RBP11.42□□□□□ -0.58
PGGT1B-204ENST00000503638 CLEC2DQ9UHP7 191 aa11.42□□□□□ -0.58
PGGT1B-204ENST00000503638 ZNF391Q9UJN7 358 aa11.42□□□□□ -0.58
PGGT1B-204ENST00000503638 ZDHHC8Q9ULC8 765 aa11.42□□□□□ -0.58
PGGT1B-204ENST00000503638 ERGIC3Q9Y282 383 aa11.42□□□□□ -0.58
PGGT1B-204ENST00000503638 PCDHGB5Q9Y5G0 923 aa11.42□□□□□ -0.58
PGGT1B-204ENST00000503638 DNHD1Q96M86 4753 aa11.41□□□□□ -0.58
PGGT1B-204ENST00000503638 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.41□□□□□ -0.58
PGGT1B-204ENST00000503638 IGHV3-64DA0A0J9YX35 117 aa11.41□□□□□ -0.58
PGGT1B-204ENST00000503638 A0A0U1RQV5 110 aa11.41□□□□□ -0.58
PGGT1B-204ENST00000503638 hCG_38984A0A1B0GV85 526 aa11.41□□□□□ -0.58
PGGT1B-204ENST00000503638 SYT7O43581 403 aa11.41□□□□□ -0.58
PGGT1B-204ENST00000503638 RGS10O43665 173 aa11.41□□□□□ -0.58
PGGT1B-204ENST00000503638 CDC14BO60729 498 aa11.41□□□□□ -0.58
PGGT1B-204ENST00000503638 LILRA1O75019 489 aa11.41□□□□□ -0.58
PGGT1B-204ENST00000503638 MTRF1O75570 445 aaKnown RBP11.41□□□□□ -0.58
PGGT1B-204ENST00000503638 TTRP02766 147 aa11.41□□□□□ -0.58
PGGT1B-204ENST00000503638 HLA-DPB1P04440 258 aa11.41□□□□□ -0.58
PGGT1B-204ENST00000503638 DAOP14920 347 aa11.41□□□□□ -0.58
PGGT1B-204ENST00000503638 C21orf33P30042 268 aaPredicted RBP11.41□□□□□ -0.58
PGGT1B-204ENST00000503638 MAP2K3P46734 347 aa11.41□□□□□ -0.58
PGGT1B-204ENST00000503638 FAM3AP98173 230 aa11.41□□□□□ -0.58
PGGT1B-204ENST00000503638 RBM48Q5RL73 367 aaKnown RBP11.41□□□□□ -0.58
PGGT1B-204ENST00000503638 CLEC2AQ6UVW9 174 aa11.41□□□□□ -0.58
PGGT1B-204ENST00000503638 CATSPERDQ86XM0 798 aa11.41□□□□□ -0.58
PGGT1B-204ENST00000503638 ELMOD2Q8IZ81 293 aa11.41□□□□□ -0.58
PGGT1B-204ENST00000503638 LRRC75A-AS1Q8N1F1 130 aa11.41□□□□□ -0.58
PGGT1B-204ENST00000503638 SEMA6DQ8NFY4 1073 aa11.41□□□□□ -0.58
PGGT1B-204ENST00000503638 OR2G2Q8NGZ5 317 aa11.41□□□□□ -0.58
PGGT1B-204ENST00000503638 OR8S1Q8NH09 359 aa11.41□□□□□ -0.58
PGGT1B-204ENST00000503638 IGFBPL1Q8WX77 278 aa11.41□□□□□ -0.58
PGGT1B-204ENST00000503638 DVL3Q92997 716 aaPredicted RBP11.41□□□□□ -0.58
PGGT1B-204ENST00000503638 SPSB4Q96A44 273 aa11.41□□□□□ -0.58
PGGT1B-204ENST00000503638 DIRC2Q96SL1 478 aa11.41□□□□□ -0.58
PGGT1B-204ENST00000503638 FOXC2Q99958 501 aa11.41□□□□□ -0.58
PGGT1B-204ENST00000503638 JAM3Q9BX67 310 aa11.41□□□□□ -0.58
PGGT1B-204ENST00000503638 G6PC2Q9NQR9 355 aa11.41□□□□□ -0.58
PGGT1B-204ENST00000503638 ERVK-18Q9QC07 812 aa11.41□□□□□ -0.58
PGGT1B-204ENST00000503638 CAB39Q9Y376 341 aaPredicted RBP11.41□□□□□ -0.58
PGGT1B-204ENST00000503638 NOP16Q9Y3C1 178 aaKnown RBP11.41□□□□□ -0.58
PGGT1B-204ENST00000503638 TRBV2A0A0J9YWF9 115 aa11.4□□□□□ -0.58
PGGT1B-204ENST00000503638 DENRO43583 198 aaKnown RBP11.4□□□□□ -0.58
PGGT1B-204ENST00000503638 SRSF10O75494 262 aaKnown RBP11.4□□□□□ -0.58
PGGT1B-204ENST00000503638 F12P00748 615 aaPredicted RBP11.4□□□□□ -0.58
PGGT1B-204ENST00000503638 CDK1P06493 297 aa11.4□□□□□ -0.58
PGGT1B-204ENST00000503638 CCDC159P0C7I6 412 aa11.4□□□□□ -0.58
PGGT1B-204ENST00000503638 UBCP0CG48 685 aaKnown RBP11.4□□□□□ -0.58
PGGT1B-204ENST00000503638 DDOSTP39656 456 aa11.4□□□□□ -0.58
PGGT1B-204ENST00000503638 MRPL28Q13084 256 aaKnown RBP11.4□□□□□ -0.58
PGGT1B-204ENST00000503638 CLEC12BQ2HXU8 276 aa11.4□□□□□ -0.58
PGGT1B-204ENST00000503638 Q6ZR03 302 aa11.4□□□□□ -0.58
PGGT1B-204ENST00000503638 PRSS35Q8N3Z0 413 aa11.4□□□□□ -0.58
PGGT1B-204ENST00000503638 ZNF525Q8N782 197 aa11.4□□□□□ -0.58
PGGT1B-204ENST00000503638 CSNK2A3Q8NEV1 391 aa11.4□□□□□ -0.58
PGGT1B-204ENST00000503638 LYZL4Q96KX0 146 aa11.4□□□□□ -0.58
PGGT1B-204ENST00000503638 COMMD4Q9H0A8 199 aa11.4□□□□□ -0.58
PGGT1B-204ENST00000503638 TRIM36Q9NQ86 728 aa11.4□□□□□ -0.58
PGGT1B-204ENST00000503638 NKIRAS2Q9NYR9 191 aa11.4□□□□□ -0.58
PGGT1B-204ENST00000503638 TREM2Q9NZC2 230 aa11.4□□□□□ -0.58
PGGT1B-204ENST00000503638 MRPL15Q9P015 296 aaKnown RBP11.4□□□□□ -0.58
PGGT1B-204ENST00000503638 PIGLQ9Y2B2 252 aa11.4□□□□□ -0.58
PGGT1B-204ENST00000503638 PNMA8CA0A1B0GUJ8 204 aa11.39□□□□□ -0.59
PGGT1B-204ENST00000503638 LOC107986453A0A1B0GWG9 222 aa11.39□□□□□ -0.59
PGGT1B-204ENST00000503638 ANXA2P2A6NMY6 339 aa11.39□□□□□ -0.59
PGGT1B-204ENST00000503638 E9PI62 339 aa11.39□□□□□ -0.59
PGGT1B-204ENST00000503638 F5H5P2 479 aa11.39□□□□□ -0.59
PGGT1B-204ENST00000503638 H0YL77 283 aa11.39□□□□□ -0.59
PGGT1B-204ENST00000503638 HPXP02790 462 aa11.39□□□□□ -0.59
PGGT1B-204ENST00000503638 FAHP16930 419 aa11.39□□□□□ -0.59
PGGT1B-204ENST00000503638 CRHBPP24387 322 aa11.39□□□□□ -0.59
PGGT1B-204ENST00000503638 KIR3DL2P43630 455 aa11.39□□□□□ -0.59
PGGT1B-204ENST00000503638 SRP9P49458 86 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms