RNA–Protein interactions for RNA: ENST00000503362.1

SPCS3-201, Transcript of signal peptidase complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPCS3, Length 4,571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-201ENST00000503362 PIGQQ9BRB3 760 aa11.84□□□□□ -0.51
SPCS3-201ENST00000503362 MPC2O95563 127 aa11.84□□□□□ -0.51
SPCS3-201ENST00000503362 ZNF133P52736 654 aaPredicted RBP11.84□□□□□ -0.51
SPCS3-201ENST00000503362 INSM1Q01101 510 aaPredicted RBP11.84□□□□□ -0.51
SPCS3-201ENST00000503362 AVPI1Q5T686 147 aa11.84□□□□□ -0.51
SPCS3-201ENST00000503362 FIP1L1Q6UN15 594 aaKnown RBP11.84□□□□□ -0.51
SPCS3-201ENST00000503362 GPX8Q8TED1 209 aa11.84□□□□□ -0.51
SPCS3-201ENST00000503362 EDAQ92838 391 aa11.84□□□□□ -0.51
SPCS3-201ENST00000503362 NECAP2Q9NVZ3 263 aa11.84□□□□□ -0.51
SPCS3-201ENST00000503362 ATPIF1Q9UII2 106 aa11.84□□□□□ -0.51
SPCS3-201ENST00000503362 PTPRZ1P23471 2315 aaPredicted RBP11.83□□□□□ -0.52
SPCS3-201ENST00000503362 ANGPTL7O43827 346 aa11.83□□□□□ -0.52
SPCS3-201ENST00000503362 FCGR2CP31995 323 aa11.83□□□□□ -0.52
SPCS3-201ENST00000503362 TUSC1Q2TAM9 212 aa11.83□□□□□ -0.52
SPCS3-201ENST00000503362 UNQ9370/PRO34162Q6UXP9 181 aa11.83□□□□□ -0.52
SPCS3-201ENST00000503362 CATSPERDQ86XM0 798 aa11.83□□□□□ -0.52
SPCS3-201ENST00000503362 OR4D6Q8NGJ1 314 aa11.83□□□□□ -0.52
SPCS3-201ENST00000503362 OR10Z1Q8NGY1 313 aa11.83□□□□□ -0.52
SPCS3-201ENST00000503362 C2CD4CQ8TF44 421 aa11.83□□□□□ -0.52
SPCS3-201ENST00000503362 LIPHQ8WWY8 451 aa11.83□□□□□ -0.52
SPCS3-201ENST00000503362 C2orf50Q96LR7 162 aa11.83□□□□□ -0.52
SPCS3-201ENST00000503362 UQCC2Q9BRT2 126 aa11.83□□□□□ -0.52
SPCS3-201ENST00000503362 TRIOBPQ9H2D6 2365 aa11.83□□□□□ -0.52
SPCS3-201ENST00000503362 ZNF354AO60765 605 aaPredicted RBP11.83□□□□□ -0.52
SPCS3-201ENST00000503362 VAMP5O95183 116 aa11.83□□□□□ -0.52
SPCS3-201ENST00000503362 ITGB2P05107 769 aa11.83□□□□□ -0.52
SPCS3-201ENST00000503362 OR5H8P0DN80 308 aa11.83□□□□□ -0.52
SPCS3-201ENST00000503362 TMPPEQ6ZT21 453 aa11.83□□□□□ -0.52
SPCS3-201ENST00000503362 C9orf40Q8IXQ3 194 aa11.83□□□□□ -0.52
SPCS3-201ENST00000503362 ARHGEF39Q8N4T4 335 aa11.83□□□□□ -0.52
SPCS3-201ENST00000503362 GPX7Q96SL4 187 aaPredicted RBP11.83□□□□□ -0.52
SPCS3-201ENST00000503362 C20orf24Q9BUV8 137 aa11.83□□□□□ -0.52
SPCS3-201ENST00000503362 IGKV1D-42A0A075B6H8 117 aa11.83□□□□□ -0.52
SPCS3-201ENST00000503362 TRAPPC2LH3BP13 241 aa11.83□□□□□ -0.52
SPCS3-201ENST00000503362 RPL12P30050 165 aaKnown RBP11.83□□□□□ -0.52
SPCS3-201ENST00000503362 RBP2P50120 134 aa11.83□□□□□ -0.52
SPCS3-201ENST00000503362 KMT5CQ86Y97 462 aa11.83□□□□□ -0.52
SPCS3-201ENST00000503362 LILRB2Q8N423 598 aa11.83□□□□□ -0.52
SPCS3-201ENST00000503362 ZNF709Q8N972 641 aa11.83□□□□□ -0.52
SPCS3-201ENST00000503362 ZNF485Q8NCK3 441 aa11.83□□□□□ -0.52
SPCS3-201ENST00000503362 BPIFCQ8NFQ6 507 aa11.83□□□□□ -0.52
SPCS3-201ENST00000503362 OR5M9Q8NGP3 310 aa11.83□□□□□ -0.52
SPCS3-201ENST00000503362 ZNF768Q9H5H4 540 aaKnown RBP11.83□□□□□ -0.52
SPCS3-201ENST00000503362 TRPM7Q96QT4 1865 aa11.83□□□□□ -0.52
SPCS3-201ENST00000503362 C17orf51A8MQB3 221 aa11.82□□□□□ -0.52
SPCS3-201ENST00000503362 PNPP00491 289 aa11.82□□□□□ -0.52
SPCS3-201ENST00000503362 HIST1H1DP16402 221 aaKnown RBP11.82□□□□□ -0.52
SPCS3-201ENST00000503362 OR3A4PP47883 348 aa11.82□□□□□ -0.52
SPCS3-201ENST00000503362 IKZF1Q13422 519 aa11.82□□□□□ -0.52
SPCS3-201ENST00000503362 OR6K3Q8NGY3 331 aa11.82□□□□□ -0.52
SPCS3-201ENST00000503362 SPACA9Q96E40 222 aaPredicted RBP11.82□□□□□ -0.52
SPCS3-201ENST00000503362 FLVCR1Q9Y5Y0 555 aa11.82□□□□□ -0.52
SPCS3-201ENST00000503362 MRPS18BQ9Y676 258 aaKnown RBP11.82□□□□□ -0.52
SPCS3-201ENST00000503362 MED12Q93074 2177 aa11.82□□□□□ -0.52
SPCS3-201ENST00000503362 TRBV5-5A0A0J9YX44 114 aa11.82□□□□□ -0.52
SPCS3-201ENST00000503362 FTCDNL1E5RQL4 147 aa11.82□□□□□ -0.52
SPCS3-201ENST00000503362 DHHO43323 396 aa11.82□□□□□ -0.52
SPCS3-201ENST00000503362 TXNL1O43396 289 aa11.82□□□□□ -0.52
SPCS3-201ENST00000503362 MRPL49Q13405 166 aaKnown RBP11.82□□□□□ -0.52
SPCS3-201ENST00000503362 SMUG1Q53HV7 270 aa11.82□□□□□ -0.52
SPCS3-201ENST00000503362 Q6ZRG5 221 aa11.82□□□□□ -0.52
SPCS3-201ENST00000503362 LGI3Q8N145 548 aa11.82□□□□□ -0.52
SPCS3-201ENST00000503362 TMEM217Q8N7C4 229 aa11.82□□□□□ -0.52
SPCS3-201ENST00000503362 SIT1Q9Y3P8 196 aa11.82□□□□□ -0.52
SPCS3-201ENST00000503362 NME2P1O60361 137 aa11.82□□□□□ -0.52
SPCS3-201ENST00000503362 ADAP1O75689 374 aa11.82□□□□□ -0.52
SPCS3-201ENST00000503362 B3GALNT1O75752 331 aa11.82□□□□□ -0.52
SPCS3-201ENST00000503362 BVESQ8NE79 360 aa11.82□□□□□ -0.52
SPCS3-201ENST00000503362 OR1S2Q8NGQ3 325 aa11.82□□□□□ -0.52
SPCS3-201ENST00000503362 RHBDD1Q8TEB9 315 aa11.82□□□□□ -0.52
SPCS3-201ENST00000503362 FKBP2P26885 142 aaKnown RBP11.82□□□□□ -0.52
SPCS3-201ENST00000503362 SHBQ15464 509 aa11.82□□□□□ -0.52
SPCS3-201ENST00000503362 KISS1Q15726 138 aa11.82□□□□□ -0.52
SPCS3-201ENST00000503362 PTCRAQ6ISU1 281 aaPredicted RBP11.82□□□□□ -0.52
SPCS3-201ENST00000503362 CLEC1AQ8NC01 280 aa11.82□□□□□ -0.52
SPCS3-201ENST00000503362 CPT1CQ8TCG5 803 aa11.82□□□□□ -0.52
SPCS3-201ENST00000503362 C14orf79Q96F83 325 aa11.82□□□□□ -0.52
SPCS3-201ENST00000503362 MS4A3Q96HJ5 214 aa11.82□□□□□ -0.52
SPCS3-201ENST00000503362 NMNAT2Q9BZQ4 307 aa11.82□□□□□ -0.52
SPCS3-201ENST00000503362 PRR13Q9NZ81 148 aa11.82□□□□□ -0.52
SPCS3-201ENST00000503362 MCTS1Q9ULC4 181 aaKnown RBP11.82□□□□□ -0.52
SPCS3-201ENST00000503362 HDGFL3Q9Y3E1 203 aa11.82□□□□□ -0.52
SPCS3-201ENST00000503362 KIF26BQ2KJY2 2108 aa11.82□□□□□ -0.52
SPCS3-201ENST00000503362 TCF20Q9UGU0 1960 aaKnown RBP11.81□□□□□ -0.52
SPCS3-201ENST00000503362 NXPH3O95157 252 aa11.81□□□□□ -0.52
SPCS3-201ENST00000503362 GLRA1P23415 457 aa11.81□□□□□ -0.52
SPCS3-201ENST00000503362 TMEM255AQ5JRV8 349 aa11.81□□□□□ -0.52
SPCS3-201ENST00000503362 SLC22A25Q6T423 547 aa11.81□□□□□ -0.52
SPCS3-201ENST00000503362 HSD17B13Q7Z5P4 300 aaPredicted RBP11.81□□□□□ -0.52
SPCS3-201ENST00000503362 CLRN3Q8NCR9 226 aa11.81□□□□□ -0.52
SPCS3-201ENST00000503362 ASB10Q8WXI3 467 aa11.81□□□□□ -0.52
SPCS3-201ENST00000503362 RSPO3Q9BXY4 272 aaPredicted RBP11.81□□□□□ -0.52
SPCS3-201ENST00000503362 SLC25A31Q9H0C2 315 aa11.81□□□□□ -0.52
SPCS3-201ENST00000503362 BCO1Q9HAY6 547 aa11.81□□□□□ -0.52
SPCS3-201ENST00000503362 PISDQ9UG56 409 aa11.81□□□□□ -0.52
SPCS3-201ENST00000503362 ZDBF2Q9HCK1 2354 aa11.81□□□□□ -0.52
SPCS3-201ENST00000503362 A0A1W2PQD3 144 aa11.81□□□□□ -0.52
SPCS3-201ENST00000503362 ANKRD30BLA7E2S9 258 aa11.81□□□□□ -0.52
SPCS3-201ENST00000503362 H3BUI4 141 aa11.81□□□□□ -0.52
SPCS3-201ENST00000503362 SHOXO15266 292 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms