RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 OR1K1Q8NGR3 316 aa19.16■□□□□ 0.66
PTPN13-205ENST00000502971 SSC4DQ8WTU2 575 aa19.16■□□□□ 0.66
PTPN13-205ENST00000502971 WNT2BQ93097 391 aa19.16■□□□□ 0.66
PTPN13-205ENST00000502971 C1QTNF5Q9BXJ0 243 aa19.16■□□□□ 0.66
PTPN13-205ENST00000502971 NPAP1Q9NZP6 1156 aa19.16■□□□□ 0.66
PTPN13-205ENST00000502971 NLKQ9UBE8 527 aa19.16■□□□□ 0.66
PTPN13-205ENST00000502971 DMXL2Q8TDJ6 3036 aa19.16■□□□□ 0.66
PTPN13-205ENST00000502971 IGKV1-9A0A0C4DH69 117 aa19.15■□□□□ 0.66
PTPN13-205ENST00000502971 C1QTNF9BB2RNN3 333 aa19.15■□□□□ 0.66
PTPN13-205ENST00000502971 MKRN2OSH3BPM6 223 aa19.15■□□□□ 0.66
PTPN13-205ENST00000502971 XRCC2O43543 280 aa19.15■□□□□ 0.66
PTPN13-205ENST00000502971 HLA-HP01893 362 aa19.15■□□□□ 0.66
PTPN13-205ENST00000502971 PDGFAP04085 211 aa19.15■□□□□ 0.66
PTPN13-205ENST00000502971 C1QTNF9P0C862 333 aa19.15■□□□□ 0.66
PTPN13-205ENST00000502971 ANGPTL5Q86XS5 388 aa19.15■□□□□ 0.66
PTPN13-205ENST00000502971 RBMXL3Q8N7X1 1067 aaKnown RBP19.15■□□□□ 0.66
PTPN13-205ENST00000502971 TRAV18A0A075B6X5 111 aa19.14■□□□□ 0.66
PTPN13-205ENST00000502971 MED19A0JLT2 244 aaPredicted RBP19.14■□□□□ 0.66
PTPN13-205ENST00000502971 METTL21EPA6NDL7 271 aa19.14■□□□□ 0.66
PTPN13-205ENST00000502971 FAHP16930 419 aa19.14■□□□□ 0.66
PTPN13-205ENST00000502971 QRFPP83859 136 aa19.14■□□□□ 0.66
PTPN13-205ENST00000502971 RIPPLY1Q0D2K3 151 aa19.14■□□□□ 0.66
PTPN13-205ENST00000502971 GUSBP1Q15486 140 aa19.14■□□□□ 0.66
PTPN13-205ENST00000502971 AWAT2Q6E213 333 aa19.14■□□□□ 0.66
PTPN13-205ENST00000502971 MTFR2Q6P444 385 aa19.14■□□□□ 0.66
PTPN13-205ENST00000502971 FAM214BQ7L5A3 538 aa19.14■□□□□ 0.66
PTPN13-205ENST00000502971 OR2AE1Q8NHA4 323 aa19.14■□□□□ 0.66
PTPN13-205ENST00000502971 AKAP1Q92667 903 aaKnown RBP eCLIP19.14■□□□□ 0.66
PTPN13-205ENST00000502971 GCDHQ92947 438 aaPredicted RBP19.14■□□□□ 0.66
PTPN13-205ENST00000502971 LOC400499M0QZD8 3231 aa19.14■□□□□ 0.65
PTPN13-205ENST00000502971 KDM4BO94953 1096 aa19.14■□□□□ 0.65
PTPN13-205ENST00000502971 IL18BPO95998 194 aa19.14■□□□□ 0.65
PTPN13-205ENST00000502971 CD79AP11912 226 aa19.14■□□□□ 0.65
PTPN13-205ENST00000502971 PMPCAQ10713 525 aa19.14■□□□□ 0.65
PTPN13-205ENST00000502971 PLA1AQ53H76 456 aa19.14■□□□□ 0.65
PTPN13-205ENST00000502971 AGAP6Q5VW22 663 aa19.14■□□□□ 0.65
PTPN13-205ENST00000502971 OR2A2Q6IF42 318 aa19.14■□□□□ 0.65
PTPN13-205ENST00000502971 COLCA1Q6ZS62 124 aa19.14■□□□□ 0.65
PTPN13-205ENST00000502971 OR2W3Q7Z3T1 314 aa19.14■□□□□ 0.65
PTPN13-205ENST00000502971 OR5M9Q8NGP3 310 aa19.14■□□□□ 0.65
PTPN13-205ENST00000502971 NANOS1Q8WY41 292 aaKnown RBP19.14■□□□□ 0.65
PTPN13-205ENST00000502971 BCL2L2Q92843 193 aaPredicted RBP19.14■□□□□ 0.65
PTPN13-205ENST00000502971 MARVELD1Q9BSK0 173 aa19.14■□□□□ 0.65
PTPN13-205ENST00000502971 ETAA1Q9NY74 926 aa19.14■□□□□ 0.65
PTPN13-205ENST00000502971 B3GNT2Q9NY97 397 aa19.14■□□□□ 0.65
PTPN13-205ENST00000502971 MRPS28Q9Y2Q9 187 aaKnown RBP19.14■□□□□ 0.65
PTPN13-205ENST00000502971 LAMA5O15230 3695 aa19.14■□□□□ 0.65
PTPN13-205ENST00000502971 MEIOCA2RUB1 952 aa19.13■□□□□ 0.65
PTPN13-205ENST00000502971 CRYABP02511 175 aaKnown RBP19.13■□□□□ 0.65
PTPN13-205ENST00000502971 UBBP0CG47 229 aa19.13■□□□□ 0.65
PTPN13-205ENST00000502971 RAB1AP62820 205 aa19.13■□□□□ 0.65
PTPN13-205ENST00000502971 PLP2Q04941 152 aa19.13■□□□□ 0.65
PTPN13-205ENST00000502971 SNTB2Q13425 540 aaKnown RBP19.13■□□□□ 0.65
PTPN13-205ENST00000502971 UBE2V2Q15819 145 aa19.13■□□□□ 0.65
PTPN13-205ENST00000502971 RSBN1Q5VWQ0 802 aaPredicted RBP19.13■□□□□ 0.65
PTPN13-205ENST00000502971 RAB12Q6IQ22 244 aa19.13■□□□□ 0.65
PTPN13-205ENST00000502971 TFAP2EQ6VUC0 442 aa19.13■□□□□ 0.65
PTPN13-205ENST00000502971 PNLDC1Q8NA58 520 aaKnown RBP19.13■□□□□ 0.65
PTPN13-205ENST00000502971 ARHGAP21Q5T5U3 1957 aa19.12■□□□□ 0.65
PTPN13-205ENST00000502971 LOC100509620A0A075B734 347 aa19.12■□□□□ 0.65
PTPN13-205ENST00000502971 NAP1L6A6NFF2 107 aa19.12■□□□□ 0.65
PTPN13-205ENST00000502971 SCGNO76038 276 aa19.12■□□□□ 0.65
PTPN13-205ENST00000502971 CNOT4O95628 575 aaKnown RBP19.12■□□□□ 0.65
PTPN13-205ENST00000502971 VSIG8P0DPA2 414 aa19.12■□□□□ 0.65
PTPN13-205ENST00000502971 BTCP35070 178 aa19.12■□□□□ 0.65
PTPN13-205ENST00000502971 SF3B4Q15427 424 aaKnown RBP eCLIP19.12■□□□□ 0.65
PTPN13-205ENST00000502971 ACSF3Q4G176 576 aaPredicted RBP19.12■□□□□ 0.65
PTPN13-205ENST00000502971 OR10K2Q6IF99 312 aa19.12■□□□□ 0.65
PTPN13-205ENST00000502971 PAQR4Q8N4S7 273 aaPredicted RBP19.12■□□□□ 0.65
PTPN13-205ENST00000502971 ZCCHC14Q8WYQ9 949 aaKnown RBP19.12■□□□□ 0.65
PTPN13-205ENST00000502971 FAM46BQ96A09 425 aa19.12■□□□□ 0.65
PTPN13-205ENST00000502971 SPSB4Q96A44 273 aa19.12■□□□□ 0.65
PTPN13-205ENST00000502971 CREB3L1Q96BA8 519 aa19.12■□□□□ 0.65
PTPN13-205ENST00000502971 GPER1Q99527 375 aa19.12■□□□□ 0.65
PTPN13-205ENST00000502971 DPAGT1Q9H3H5 408 aa19.12■□□□□ 0.65
PTPN13-205ENST00000502971 NEK6Q9HC98 313 aa19.12■□□□□ 0.65
PTPN13-205ENST00000502971 COPZ2Q9P299 210 aa19.12■□□□□ 0.65
PTPN13-205ENST00000502971 GHRLQ9UBU3 117 aa19.12■□□□□ 0.65
PTPN13-205ENST00000502971 KLK11Q9UBX7 282 aa19.12■□□□□ 0.65
PTPN13-205ENST00000502971 FREM1Q5H8C1 2179 aa19.12■□□□□ 0.65
PTPN13-205ENST00000502971 IGF2RP11717 2491 aa19.11■□□□□ 0.65
PTPN13-205ENST00000502971 hCG_38984A0A1B0GV85 526 aa19.11■□□□□ 0.65
PTPN13-205ENST00000502971 ANKRD20A5PA0PJZ0 165 aa19.11■□□□□ 0.65
PTPN13-205ENST00000502971 ZNF503-AS2A6NEH8 195 aa19.11■□□□□ 0.65
PTPN13-205ENST00000502971 TMEM14DPA8MWL7 114 aa19.11■□□□□ 0.65
PTPN13-205ENST00000502971 H7C417 338 aa19.11■□□□□ 0.65
PTPN13-205ENST00000502971 SULT1C2O00338 296 aa19.11■□□□□ 0.65
PTPN13-205ENST00000502971 PTHLHP12272 177 aa19.11■□□□□ 0.65
PTPN13-205ENST00000502971 STOMP27105 288 aa19.11■□□□□ 0.65
PTPN13-205ENST00000502971 PRSS3P35030 304 aa19.11■□□□□ 0.65
PTPN13-205ENST00000502971 UNC119Q13432 240 aa19.11■□□□□ 0.65
PTPN13-205ENST00000502971 GLIPR1L1Q6UWM5 242 aa19.11■□□□□ 0.65
PTPN13-205ENST00000502971 GLCCI1Q86VQ1 547 aa19.11■□□□□ 0.65
PTPN13-205ENST00000502971 DEDD2Q8WXF8 326 aa19.11■□□□□ 0.65
PTPN13-205ENST00000502971 SPACA5Q96QH8 159 aa19.11■□□□□ 0.65
PTPN13-205ENST00000502971 NOX3Q9HBY0 568 aa19.11■□□□□ 0.65
PTPN13-205ENST00000502971 MYEF2Q9P2K5 600 aaKnown RBP19.11■□□□□ 0.65
PTPN13-205ENST00000502971 MTFP1Q9UDX5 166 aa19.11■□□□□ 0.65
PTPN13-205ENST00000502971 ZNHIT1O43257 154 aa19.11■□□□□ 0.65
PTPN13-205ENST00000502971 RBBP9O75884 186 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms