RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 GLYATL3Q5SZD4 288 aa13.19□□□□□ -0.3
MUC1-220ENST00000498431 SMARCD3Q6STE5 483 aa13.19□□□□□ -0.3
MUC1-220ENST00000498431 PLPP7Q8NBV4 271 aa13.19□□□□□ -0.3
MUC1-220ENST00000498431 OR2AJ1Q8NGZ0 328 aa13.19□□□□□ -0.3
MUC1-220ENST00000498431 OR4K13Q8NH42 304 aa13.19□□□□□ -0.3
MUC1-220ENST00000498431 ZNF799Q96GE5 643 aa13.19□□□□□ -0.3
MUC1-220ENST00000498431 SLC22A4Q9H015 551 aa13.19□□□□□ -0.3
MUC1-220ENST00000498431 TRIM36Q9NQ86 728 aa13.19□□□□□ -0.3
MUC1-220ENST00000498431 MRPL22Q9NWU5 206 aaKnown RBP13.19□□□□□ -0.3
MUC1-220ENST00000498431 ONECUT1Q9UBC0 465 aa13.19□□□□□ -0.3
MUC1-220ENST00000498431 KAAG1Q9UBP8 84 aa13.19□□□□□ -0.3
MUC1-220ENST00000498431 CD300AQ9UGN4 299 aa13.19□□□□□ -0.3
MUC1-220ENST00000498431 NOP16Q9Y3C1 178 aaKnown RBP13.19□□□□□ -0.3
MUC1-220ENST00000498431 A0A1B0GVI7 797 aa13.18□□□□□ -0.3
MUC1-220ENST00000498431 hCG_1807616A0A1W2PRN6 198 aa13.18□□□□□ -0.3
MUC1-220ENST00000498431 GGT3PA6NGU5 568 aa13.18□□□□□ -0.3
MUC1-220ENST00000498431 RNASEK-C17orf49H0YIS7 233 aa13.18□□□□□ -0.3
MUC1-220ENST00000498431 GSTA4O15217 222 aa13.18□□□□□ -0.3
MUC1-220ENST00000498431 DIRAS1O95057 198 aa13.18□□□□□ -0.3
MUC1-220ENST00000498431 ALX3O95076 343 aa13.18□□□□□ -0.3
MUC1-220ENST00000498431 ECDO95905 644 aaPredicted RBP13.18□□□□□ -0.3
MUC1-220ENST00000498431 FBP1P09467 338 aa13.18□□□□□ -0.3
MUC1-220ENST00000498431 PSKH1P11801 424 aa13.18□□□□□ -0.3
MUC1-220ENST00000498431 HSD17B1P14061 328 aa13.18□□□□□ -0.3
MUC1-220ENST00000498431 PCK2Q16822 640 aa13.18□□□□□ -0.3
MUC1-220ENST00000498431 RFX4Q33E94 735 aa13.18□□□□□ -0.3
MUC1-220ENST00000498431 KPRPQ5T749 579 aaPredicted RBP13.18□□□□□ -0.3
MUC1-220ENST00000498431 SAMD5Q5TGI4 173 aa13.18□□□□□ -0.3
MUC1-220ENST00000498431 TEX36Q5VZQ5 186 aa13.18□□□□□ -0.3
MUC1-220ENST00000498431 SLC35E4Q6ICL7 350 aa13.18□□□□□ -0.3
MUC1-220ENST00000498431 ZBTB46Q86UZ6 589 aa13.18□□□□□ -0.3
MUC1-220ENST00000498431 CYP4Z1Q86W10 505 aa13.18□□□□□ -0.3
MUC1-220ENST00000498431 LNX2Q8N448 690 aa13.18□□□□□ -0.3
MUC1-220ENST00000498431 PNKDQ8N490 385 aa13.18□□□□□ -0.3
MUC1-220ENST00000498431 RNF148Q8N7C7 305 aa13.18□□□□□ -0.3
MUC1-220ENST00000498431 LY6G5BQ8NDX9 201 aa13.18□□□□□ -0.3
MUC1-220ENST00000498431 OR56B2PQ8NGI1 322 aa13.18□□□□□ -0.3
MUC1-220ENST00000498431 SEH1LQ96EE3 360 aa13.18□□□□□ -0.3
MUC1-220ENST00000498431 CCL13Q99616 98 aa13.18□□□□□ -0.3
MUC1-220ENST00000498431 THTPAQ9BU02 230 aa13.18□□□□□ -0.3
MUC1-220ENST00000498431 NDUFAF4Q9P032 175 aa13.18□□□□□ -0.3
MUC1-220ENST00000498431 AURKCQ9UQB9 309 aa13.18□□□□□ -0.3
MUC1-220ENST00000498431 SIGLEC9Q9Y336 463 aa13.18□□□□□ -0.3
MUC1-220ENST00000498431 OR6C68A6NDL8 312 aa13.17□□□□□ -0.3
MUC1-220ENST00000498431 DNAJC8O75937 253 aaPredicted RBP13.17□□□□□ -0.3
MUC1-220ENST00000498431 RENP00797 406 aa13.17□□□□□ -0.3
MUC1-220ENST00000498431 NCK1P16333 377 aa13.17□□□□□ -0.3
MUC1-220ENST00000498431 TGFBR2P37173 567 aa13.17□□□□□ -0.3
MUC1-220ENST00000498431 SLC36A3Q495N2 470 aa13.17□□□□□ -0.3
MUC1-220ENST00000498431 WDR38Q5JTN6 314 aa13.17□□□□□ -0.3
MUC1-220ENST00000498431 METAP1DQ6UB28 335 aaPredicted RBP13.17□□□□□ -0.3
MUC1-220ENST00000498431 WDR86Q86TI4 376 aa13.17□□□□□ -0.3
MUC1-220ENST00000498431 C11orf53Q8IXP5 236 aa13.17□□□□□ -0.3
MUC1-220ENST00000498431 FAM216BQ8N7L0 139 aa13.17□□□□□ -0.3
MUC1-220ENST00000498431 Q8N7P7 452 aa13.17□□□□□ -0.3
MUC1-220ENST00000498431 SDR9C7Q8NEX9 313 aa13.17□□□□□ -0.3
MUC1-220ENST00000498431 OR52J3Q8NH60 311 aa13.17□□□□□ -0.3
MUC1-220ENST00000498431 FANK1Q8TC84 345 aa13.17□□□□□ -0.3
MUC1-220ENST00000498431 FUZQ9BT04 418 aa13.17□□□□□ -0.3
MUC1-220ENST00000498431 OR52D1Q9H346 318 aa13.17□□□□□ -0.3
MUC1-220ENST00000498431 MRPL15Q9P015 296 aaKnown RBP13.17□□□□□ -0.3
MUC1-220ENST00000498431 BTBD17A6NE02 478 aa13.16□□□□□ -0.3
MUC1-220ENST00000498431 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.16□□□□□ -0.3
MUC1-220ENST00000498431 NPFFO15130 113 aa13.16□□□□□ -0.3
MUC1-220ENST00000498431 GSC2O15499 205 aa13.16□□□□□ -0.3
MUC1-220ENST00000498431 GMNNO75496 209 aa13.16□□□□□ -0.3
MUC1-220ENST00000498431 HLA-DQA2P01906 255 aa13.16□□□□□ -0.3
MUC1-220ENST00000498431 OPN1MWP04001 364 aa13.16□□□□□ -0.3
MUC1-220ENST00000498431 OPN1MW2P0DN77 364 aa13.16□□□□□ -0.3
MUC1-220ENST00000498431 OPN1MW3P0DN78 364 aa13.16□□□□□ -0.3
MUC1-220ENST00000498431 SELLP14151 372 aa13.16□□□□□ -0.3
MUC1-220ENST00000498431 OTX1P32242 354 aaPredicted RBP13.16□□□□□ -0.3
MUC1-220ENST00000498431 FAM189A2Q15884 450 aa13.16□□□□□ -0.3
MUC1-220ENST00000498431 C11orf91Q3C1V1 193 aa13.16□□□□□ -0.3
MUC1-220ENST00000498431 LYPD4Q6UWN0 246 aa13.16□□□□□ -0.3
MUC1-220ENST00000498431 C11orf44Q8N8P7 122 aa13.16□□□□□ -0.3
MUC1-220ENST00000498431 PPP1R35Q8TAP8 253 aa13.16□□□□□ -0.3
MUC1-220ENST00000498431 LRRC29Q8WV35 223 aa13.16□□□□□ -0.3
MUC1-220ENST00000498431 MCUR1Q96AQ8 359 aa13.16□□□□□ -0.3
MUC1-220ENST00000498431 PPA2Q9H2U2 334 aa13.16□□□□□ -0.3
MUC1-220ENST00000498431 FOXJ3Q9UPW0 622 aa13.16□□□□□ -0.3
MUC1-220ENST00000498431 RYR3Q15413 4870 aa13.15□□□□□ -0.3
MUC1-220ENST00000498431 COL7A1Q02388 2944 aa13.15□□□□□ -0.3
MUC1-220ENST00000498431 BHLHE40O14503 412 aa13.15□□□□□ -0.3
MUC1-220ENST00000498431 ACOT8O14734 319 aa13.15□□□□□ -0.3
MUC1-220ENST00000498431 ARPC3O15145 178 aa13.15□□□□□ -0.3
MUC1-220ENST00000498431 PIN1P1O15428 100 aa13.15□□□□□ -0.3
MUC1-220ENST00000498431 SLC2A1P11166 492 aa13.15□□□□□ -0.3
MUC1-220ENST00000498431 RHCEP18577 417 aa13.15□□□□□ -0.3
MUC1-220ENST00000498431 AMY2BP19961 511 aa13.15□□□□□ -0.3
MUC1-220ENST00000498431 PYCR1P32322 319 aa13.15□□□□□ -0.3
MUC1-220ENST00000498431 SAA4P35542 130 aa13.15□□□□□ -0.3
MUC1-220ENST00000498431 CSNK2BP67870 215 aa13.15□□□□□ -0.3
MUC1-220ENST00000498431 C1orf122Q6ZSJ8 110 aa13.15□□□□□ -0.3
MUC1-220ENST00000498431 FAM86B1Q8N7N1 296 aa13.15□□□□□ -0.3
MUC1-220ENST00000498431 SPERTQ8NA61 448 aa13.15□□□□□ -0.3
MUC1-220ENST00000498431 NPRL2Q8WTW4 380 aa13.15□□□□□ -0.3
MUC1-220ENST00000498431 ZNRF4Q8WWF5 429 aa13.15□□□□□ -0.3
MUC1-220ENST00000498431 TNFRSF14Q92956 283 aa13.15□□□□□ -0.3
MUC1-220ENST00000498431 SPTSSAQ969W0 71 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms