RNA–Protein interactions for RNA: ENST00000498284.1

PTPRK-215, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 524 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-215ENST00000498284 UBALD1Q8TB05 177 aa2.58□□□□□ -2
PTPRK-215ENST00000498284 PIFOQ8TCI5 191 aa2.58□□□□□ -2
PTPRK-215ENST00000498284 RBMXL1Q96E39 390 aaKnown RBP2.58□□□□□ -2
PTPRK-215ENST00000498284 COL21A1Q96P44 957 aa2.58□□□□□ -2
PTPRK-215ENST00000498284 ANKRD60Q9BZ19 345 aa2.58□□□□□ -2
PTPRK-215ENST00000498284 PIGUQ9H490 435 aa2.58□□□□□ -2
PTPRK-215ENST00000498284 UBE2ZQ9H832 354 aaPredicted RBP2.58□□□□□ -2
PTPRK-215ENST00000498284 ZNF430Q9H8G1 570 aaPredicted RBP2.58□□□□□ -2
PTPRK-215ENST00000498284 NTN4Q9HB63 628 aa2.58□□□□□ -2
PTPRK-215ENST00000498284 ZNRD1Q9P1U0 126 aa2.58□□□□□ -2
PTPRK-215ENST00000498284 YTHDF2Q9Y5A9 579 aaKnown RBP2.58□□□□□ -2
PTPRK-215ENST00000498284 C4BP0C0L5 1744 aa2.58□□□□□ -2
PTPRK-215ENST00000498284 TOGARAM1Q9Y4F4 1720 aa2.58□□□□□ -2
PTPRK-215ENST00000498284 POLR3AO14802 1390 aaPredicted RBP2.58□□□□□ -2
PTPRK-215ENST00000498284 DICER1Q9UPY3 1922 aaKnown RBP2.58□□□□□ -2
PTPRK-215ENST00000498284 CASP8AP2Q9UKL3 1982 aa2.58□□□□□ -2
PTPRK-215ENST00000498284 LTN1O94822 1766 aa2.57□□□□□ -2
PTPRK-215ENST00000498284 KCNE1BA0A087WTH5 132 aa2.57□□□□□ -2
PTPRK-215ENST00000498284 SYCE1LA8MT33 242 aa2.57□□□□□ -2
PTPRK-215ENST00000498284 H7C417 338 aa2.57□□□□□ -2
PTPRK-215ENST00000498284 RAD51BO15315 384 aa2.57□□□□□ -2
PTPRK-215ENST00000498284 FCN3O75636 299 aa2.57□□□□□ -2
PTPRK-215ENST00000498284 CTAG2O75638 210 aa2.57□□□□□ -2
PTPRK-215ENST00000498284 VAMP5O95183 116 aa2.57□□□□□ -2
PTPRK-215ENST00000498284 IFNW1P05000 195 aa2.57□□□□□ -2
PTPRK-215ENST00000498284 ADRA2AP08913 450 aa2.57□□□□□ -2
PTPRK-215ENST00000498284 RHOXF2BP0C7M4 288 aa2.57□□□□□ -2
PTPRK-215ENST00000498284 UBCP0CG48 685 aaKnown RBP2.57□□□□□ -2
PTPRK-215ENST00000498284 SFTPCP11686 197 aa2.57□□□□□ -2
PTPRK-215ENST00000498284 PSMC3P17980 439 aa2.57□□□□□ -2
PTPRK-215ENST00000498284 ATF6P18850 670 aa2.57□□□□□ -2
PTPRK-215ENST00000498284 IL32P24001 234 aa2.57□□□□□ -2
PTPRK-215ENST00000498284 RPS23P62266 143 aaKnown RBP2.57□□□□□ -2
PTPRK-215ENST00000498284 DGCR6Q14129 220 aa2.57□□□□□ -2
PTPRK-215ENST00000498284 ITIH4Q14624 930 aa2.57□□□□□ -2
PTPRK-215ENST00000498284 Q6ZR03 302 aa2.57□□□□□ -2
PTPRK-215ENST00000498284 SNX20Q7Z614 316 aa2.57□□□□□ -2
PTPRK-215ENST00000498284 CALHM1Q8IU99 346 aa2.57□□□□□ -2
PTPRK-215ENST00000498284 ZNF695Q8IW36 515 aa2.57□□□□□ -2
PTPRK-215ENST00000498284 COX18Q8N8Q8 333 aa2.57□□□□□ -2
PTPRK-215ENST00000498284 OR6Q1Q8NGQ2 317 aa2.57□□□□□ -2
PTPRK-215ENST00000498284 OR52E5Q8NH55 327 aa2.57□□□□□ -2
PTPRK-215ENST00000498284 COQ8AQ8NI60 647 aa2.57□□□□□ -2
PTPRK-215ENST00000498284 ZNF317Q96PQ6 595 aaPredicted RBP2.57□□□□□ -2
PTPRK-215ENST00000498284 FOXC2Q99958 501 aa2.57□□□□□ -2
PTPRK-215ENST00000498284 PXMP2Q9NR77 195 aa2.57□□□□□ -2
PTPRK-215ENST00000498284 ZNF355PQ9NSJ1 428 aa2.57□□□□□ -2
PTPRK-215ENST00000498284 AHSPQ9NZD4 102 aa2.57□□□□□ -2
PTPRK-215ENST00000498284 MYEF2Q9P2K5 600 aaKnown RBP2.57□□□□□ -2
PTPRK-215ENST00000498284 MTFP1Q9UDX5 166 aa2.57□□□□□ -2
PTPRK-215ENST00000498284 HYOU1Q9Y4L1 999 aa2.57□□□□□ -2
PTPRK-215ENST00000498284 ADGRB1O14514 1584 aa2.57□□□□□ -2
PTPRK-215ENST00000498284 COL6A3P12111 3177 aa2.57□□□□□ -2
PTPRK-215ENST00000498284 MKI67P46013 3256 aaKnown RBP2.57□□□□□ -2
PTPRK-215ENST00000498284 C4AP0C0L4 1744 aa2.56□□□□□ -2
PTPRK-215ENST00000498284 TET2Q6N021 2002 aaPredicted RBP2.56□□□□□ -2
PTPRK-215ENST00000498284 CEP290O15078 2479 aa2.56□□□□□ -2
PTPRK-215ENST00000498284 TRAV19A0A0A6YYK7 116 aa2.56□□□□□ -2
PTPRK-215ENST00000498284 TSPAN11A1L157 253 aa2.56□□□□□ -2
PTPRK-215ENST00000498284 NCF1BA6NI72 391 aaPredicted RBP2.56□□□□□ -2
PTPRK-215ENST00000498284 NCF1CA8MVU1 366 aaPredicted RBP2.56□□□□□ -2
PTPRK-215ENST00000498284 H7C1H1 209 aa2.56□□□□□ -2
PTPRK-215ENST00000498284 AQP8O94778 261 aa2.56□□□□□ -2
PTPRK-215ENST00000498284 HLA-HP01893 362 aa2.56□□□□□ -2
PTPRK-215ENST00000498284 KRT16P08779 473 aa2.56□□□□□ -2
PTPRK-215ENST00000498284 MRPL3P09001 348 aaKnown RBP2.56□□□□□ -2
PTPRK-215ENST00000498284 CTRB1P17538 263 aa2.56□□□□□ -2
PTPRK-215ENST00000498284 RFC3P40938 356 aa2.56□□□□□ -2
PTPRK-215ENST00000498284 TRMT5Q32P41 509 aaKnown RBP2.56□□□□□ -2
PTPRK-215ENST00000498284 BEX5Q5H9J7 111 aa2.56□□□□□ -2
PTPRK-215ENST00000498284 TCEAL5Q5H9L2 206 aa2.56□□□□□ -2
PTPRK-215ENST00000498284 STUMQ69YW2 141 aa2.56□□□□□ -2
PTPRK-215ENST00000498284 TMCO2Q7Z6W1 182 aaPredicted RBP2.56□□□□□ -2
PTPRK-215ENST00000498284 NPWQ8N729 165 aa2.56□□□□□ -2
PTPRK-215ENST00000498284 OR11H7Q8NGC8 314 aa2.56□□□□□ -2
PTPRK-215ENST00000498284 OR56A4Q8NGH8 313 aa2.56□□□□□ -2
PTPRK-215ENST00000498284 CA5BP1Q8WTZ4 195 aa2.56□□□□□ -2
PTPRK-215ENST00000498284 C15orf40Q8WUR7 153 aa2.56□□□□□ -2
PTPRK-215ENST00000498284 FRZBQ92765 325 aa2.56□□□□□ -2
PTPRK-215ENST00000498284 TCEAL3Q969E4 200 aa2.56□□□□□ -2
PTPRK-215ENST00000498284 DCPSQ96C86 337 aaKnown RBP2.56□□□□□ -2
PTPRK-215ENST00000498284 JSRP1Q96MG2 331 aaPredicted RBP2.56□□□□□ -2
PTPRK-215ENST00000498284 CAMK2N2Q96S95 79 aa2.56□□□□□ -2
PTPRK-215ENST00000498284 LZTS2Q9BRK4 669 aa2.56□□□□□ -2
PTPRK-215ENST00000498284 WFDC1Q9HC57 220 aa2.56□□□□□ -2
PTPRK-215ENST00000498284 LYRM4Q9HD34 91 aa2.56□□□□□ -2
PTPRK-215ENST00000498284 MRPS30Q9NP92 439 aaKnown RBP2.56□□□□□ -2
PTPRK-215ENST00000498284 DDX19AQ9NUU7 478 aaKnown RBP2.56□□□□□ -2
PTPRK-215ENST00000498284 DDX18Q9NVP1 670 aaKnown RBP2.56□□□□□ -2
PTPRK-215ENST00000498284 SLC39A1Q9NY26 324 aa2.56□□□□□ -2
PTPRK-215ENST00000498284 ZNF282Q9UDV7 671 aaPredicted RBP2.56□□□□□ -2
PTPRK-215ENST00000498284 RCL1Q9Y2P8 373 aaKnown RBP2.56□□□□□ -2
PTPRK-215ENST00000498284 SAR1BQ9Y6B6 198 aa2.56□□□□□ -2
PTPRK-215ENST00000498284 TMEM14AQ9Y6G1 99 aa2.56□□□□□ -2
PTPRK-215ENST00000498284 GAKO14976 1311 aa2.56□□□□□ -2
PTPRK-215ENST00000498284 TTC41PQ6P2S7 1318 aa2.56□□□□□ -2
PTPRK-215ENST00000498284 ANKRD36BQ8N2N9 1353 aa2.56□□□□□ -2
PTPRK-215ENST00000498284 ADAMTS7Q9UKP4 1686 aa2.56□□□□□ -2
PTPRK-215ENST00000498284 SZT2Q5T011 3432 aa2.56□□□□□ -2
PTPRK-215ENST00000498284 SCN4AP35499 1836 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms