RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 CD28P10747 220 aa1.24□□□□□ -2.21
SMC4-227ENST00000497984 TCP1P17987 556 aaKnown RBP1.24□□□□□ -2.21
SMC4-227ENST00000497984 EIF2S2P20042 333 aaKnown RBP1.24□□□□□ -2.21
SMC4-227ENST00000497984 OR1E1P30953 314 aa1.24□□□□□ -2.21
SMC4-227ENST00000497984 PSMD8P48556 350 aa1.24□□□□□ -2.21
SMC4-227ENST00000497984 TGM4P49221 684 aa1.24□□□□□ -2.21
SMC4-227ENST00000497984 MRPL19P49406 292 aaKnown RBP1.24□□□□□ -2.21
SMC4-227ENST00000497984 NDUFA8P51970 172 aa1.24□□□□□ -2.21
SMC4-227ENST00000497984 NAB1Q13506 487 aa1.24□□□□□ -2.21
SMC4-227ENST00000497984 ZNF829Q3KNS6 432 aaPredicted RBP1.24□□□□□ -2.21
SMC4-227ENST00000497984 ALKBH6Q3KRA9 238 aa1.24□□□□□ -2.21
SMC4-227ENST00000497984 MFSD14CQ5VZR4 134 aa1.24□□□□□ -2.21
SMC4-227ENST00000497984 OPN5Q6U736 354 aa1.24□□□□□ -2.21
SMC4-227ENST00000497984 C12orf54Q6X4T0 127 aa1.24□□□□□ -2.21
SMC4-227ENST00000497984 DAZ4Q86SG3 579 aaKnown RBP1.24□□□□□ -2.21
SMC4-227ENST00000497984 DRAM1Q8N682 238 aa1.24□□□□□ -2.21
SMC4-227ENST00000497984 LY6G5BQ8NDX9 201 aa1.24□□□□□ -2.21
SMC4-227ENST00000497984 OR4C5Q8NGB2 326 aa1.24□□□□□ -2.21
SMC4-227ENST00000497984 RASD2Q96D21 266 aa1.24□□□□□ -2.21
SMC4-227ENST00000497984 TMEM38AQ9H6F2 299 aa1.24□□□□□ -2.21
SMC4-227ENST00000497984 DAZ1Q9NQZ3 744 aaKnown RBP1.24□□□□□ -2.21
SMC4-227ENST00000497984 PARP11Q9NR21 331 aa1.24□□□□□ -2.21
SMC4-227ENST00000497984 ASF1BQ9NVP2 202 aa1.24□□□□□ -2.21
SMC4-227ENST00000497984 CLN6Q9NWW5 311 aa1.24□□□□□ -2.21
SMC4-227ENST00000497984 TAS2R5Q9NYW4 299 aa1.24□□□□□ -2.21
SMC4-227ENST00000497984 MCTS1Q9ULC4 181 aaKnown RBP1.24□□□□□ -2.21
SMC4-227ENST00000497984 HPCAL4Q9UM19 191 aa1.24□□□□□ -2.21
SMC4-227ENST00000497984 RPRD2Q5VT52 1461 aaKnown RBP1.24□□□□□ -2.21
SMC4-227ENST00000497984 SYNJ2BP-COX16A0A087WUM0 186 aa1.23□□□□□ -2.21
SMC4-227ENST00000497984 GOLGA8OA6NCC3 632 aa1.23□□□□□ -2.21
SMC4-227ENST00000497984 GOLGA8NF8WBI6 632 aa1.23□□□□□ -2.21
SMC4-227ENST00000497984 CLDN34H7C241 214 aa1.23□□□□□ -2.21
SMC4-227ENST00000497984 M0R3G1 203 aa1.23□□□□□ -2.21
SMC4-227ENST00000497984 LSM8O95777 96 aaKnown RBP1.23□□□□□ -2.21
SMC4-227ENST00000497984 IGLV2-8P01709 118 aa1.23□□□□□ -2.21
SMC4-227ENST00000497984 IGHV1-46P01743 117 aa1.23□□□□□ -2.21
SMC4-227ENST00000497984 HBE1P02100 147 aa1.23□□□□□ -2.21
SMC4-227ENST00000497984 MAS1P04201 325 aa1.23□□□□□ -2.21
SMC4-227ENST00000497984 PGA5P0DJD9 388 aa1.23□□□□□ -2.21
SMC4-227ENST00000497984 CSNK2A2P19784 350 aaPredicted RBP1.23□□□□□ -2.21
SMC4-227ENST00000497984 USF1P22415 310 aaPredicted RBP1.23□□□□□ -2.21
SMC4-227ENST00000497984 PRKACBP22694 351 aa1.23□□□□□ -2.21
SMC4-227ENST00000497984 BMI1P35226 326 aa1.23□□□□□ -2.21
SMC4-227ENST00000497984 HSP90AB3PQ58FF7 597 aa1.23□□□□□ -2.21
SMC4-227ENST00000497984 AMMECR1LQ6DCA0 310 aa1.23□□□□□ -2.21
SMC4-227ENST00000497984 ZNF470Q6ECI4 717 aa1.23□□□□□ -2.21
SMC4-227ENST00000497984 WDR59Q6PJI9 974 aa1.23□□□□□ -2.21
SMC4-227ENST00000497984 SPESP1Q6UW49 350 aa1.23□□□□□ -2.21
SMC4-227ENST00000497984 TAS2R42Q7RTR8 314 aa1.23□□□□□ -2.21
SMC4-227ENST00000497984 CDH26Q8IXH8 852 aa1.23□□□□□ -2.21
SMC4-227ENST00000497984 ORMDL3Q8N138 153 aa1.23□□□□□ -2.21
SMC4-227ENST00000497984 SLC25A29Q8N8R3 303 aa1.23□□□□□ -2.21
SMC4-227ENST00000497984 OR10W1Q8NGF6 305 aa1.23□□□□□ -2.21
SMC4-227ENST00000497984 OR9G4Q8NGQ1 327 aa1.23□□□□□ -2.21
SMC4-227ENST00000497984 YIPF5Q969M3 257 aa1.23□□□□□ -2.21
SMC4-227ENST00000497984 RERGQ96A58 199 aaPredicted RBP1.23□□□□□ -2.21
SMC4-227ENST00000497984 EMC6Q9BV81 110 aa1.23□□□□□ -2.21
SMC4-227ENST00000497984 PIGUQ9H490 435 aa1.23□□□□□ -2.21
SMC4-227ENST00000497984 ZNF302Q9NR11 478 aa1.23□□□□□ -2.21
SMC4-227ENST00000497984 DYRK4Q9NR20 520 aa1.23□□□□□ -2.21
SMC4-227ENST00000497984 RWDD2AQ9UIY3 292 aa1.23□□□□□ -2.21
SMC4-227ENST00000497984 COMMD3-BMI1R4GMX3 469 aa1.23□□□□□ -2.21
SMC4-227ENST00000497984 MPHOSPH10O00566 681 aaKnown RBP1.22□□□□□ -2.21
SMC4-227ENST00000497984 FTH1P02794 183 aa1.22□□□□□ -2.21
SMC4-227ENST00000497984 PGA4P0DJD7 388 aa1.22□□□□□ -2.21
SMC4-227ENST00000497984 PGA3P0DJD8 388 aa1.22□□□□□ -2.21
SMC4-227ENST00000497984 MYL2P10916 166 aa1.22□□□□□ -2.21
SMC4-227ENST00000497984 CTRB1P17538 263 aa1.22□□□□□ -2.21
SMC4-227ENST00000497984 PPICP45877 212 aa1.22□□□□□ -2.21
SMC4-227ENST00000497984 FABP6P51161 128 aa1.22□□□□□ -2.21
SMC4-227ENST00000497984 ILKQ13418 452 aa1.22□□□□□ -2.21
SMC4-227ENST00000497984 HSDL1Q3SXM5 330 aa1.22□□□□□ -2.21
SMC4-227ENST00000497984 GCSAMLQ5JQS6 135 aa1.22□□□□□ -2.21
SMC4-227ENST00000497984 ZYG11AQ6WRX3 759 aa1.22□□□□□ -2.21
SMC4-227ENST00000497984 DCAKDQ8WVC6 231 aa1.22□□□□□ -2.21
SMC4-227ENST00000497984 XPO6Q96QU8 1125 aaKnown RBP1.22□□□□□ -2.21
SMC4-227ENST00000497984 TGS1Q96RS0 853 aaKnown RBP1.22□□□□□ -2.21
SMC4-227ENST00000497984 ZYG11BQ9C0D3 744 aa1.22□□□□□ -2.21
SMC4-227ENST00000497984 ACTR3CQ9C0K3 210 aaPredicted RBP1.22□□□□□ -2.21
SMC4-227ENST00000497984 DUSP21Q9H596 190 aa1.22□□□□□ -2.21
SMC4-227ENST00000497984 BEX1Q9HBH7 125 aa1.22□□□□□ -2.21
SMC4-227ENST00000497984 AGPAT4Q9NRZ5 378 aa1.22□□□□□ -2.21
SMC4-227ENST00000497984 DCAF16Q9NXF7 216 aa1.22□□□□□ -2.21
SMC4-227ENST00000497984 PTTG3PQ9NZH4 202 aa1.22□□□□□ -2.21
SMC4-227ENST00000497984 FARSAQ9Y285 508 aaKnown RBP1.22□□□□□ -2.21
SMC4-227ENST00000497984 TSPOAP1O95153 1857 aa1.21□□□□□ -2.22
SMC4-227ENST00000497984 E7EQL1 145 aa1.21□□□□□ -2.22
SMC4-227ENST00000497984 C15orf65H3BRN8 121 aa1.21□□□□□ -2.22
SMC4-227ENST00000497984 SLC9A3R1O14745 358 aaPredicted RBP1.21□□□□□ -2.22
SMC4-227ENST00000497984 LSM1O15116 133 aaKnown RBP1.21□□□□□ -2.22
SMC4-227ENST00000497984 HUS1O60921 280 aa1.21□□□□□ -2.22
SMC4-227ENST00000497984 WBP4O75554 376 aaKnown RBP1.21□□□□□ -2.22
SMC4-227ENST00000497984 CIB2O75838 187 aa1.21□□□□□ -2.22
SMC4-227ENST00000497984 SNX4O95219 450 aa1.21□□□□□ -2.22
SMC4-227ENST00000497984 FGFR1OPO95684 399 aaKnown RBP1.21□□□□□ -2.22
SMC4-227ENST00000497984 CD160O95971 181 aa1.21□□□□□ -2.22
SMC4-227ENST00000497984 OXTP01178 125 aa1.21□□□□□ -2.22
SMC4-227ENST00000497984 BCKDHBP21953 392 aa1.21□□□□□ -2.22
SMC4-227ENST00000497984 APLNRP35414 380 aa1.21□□□□□ -2.22
SMC4-227ENST00000497984 ACOT2P49753 483 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms