RNA–Protein interactions for RNA: ENST00000496852.5

ATPAF2-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, human

TSL 2

Gene ATPAF2, Length 1,662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATPAF2-208	ENST00000496852		E7EQL1	145 aa		11.98	□□□□□ -0.49
ATPAF2-208	ENST00000496852		H3BMQ9	156 aa		11.98	□□□□□ -0.49
ATPAF2-208	ENST00000496852	GABARAP	O95166	117 aa		11.98	□□□□□ -0.49
ATPAF2-208	ENST00000496852	CFL1	P23528	166 aa	Known RBP	11.98	□□□□□ -0.49
ATPAF2-208	ENST00000496852	MPV17	P39210	176 aa		11.98	□□□□□ -0.49
ATPAF2-208	ENST00000496852	MAGEB1	P43366	347 aa		11.98	□□□□□ -0.49
ATPAF2-208	ENST00000496852	PRSS12	P56730	875 aa		11.98	□□□□□ -0.49
ATPAF2-208	ENST00000496852	RPS23	P62266	143 aa	Known RBP	11.98	□□□□□ -0.49
ATPAF2-208	ENST00000496852	FAM3A	P98173	230 aa		11.98	□□□□□ -0.49
ATPAF2-208	ENST00000496852	TNK1	Q13470	666 aa		11.98	□□□□□ -0.49
ATPAF2-208	ENST00000496852	YIF1B	Q5BJH7	314 aa		11.98	□□□□□ -0.49
ATPAF2-208	ENST00000496852	TMEM255A	Q5JRV8	349 aa		11.98	□□□□□ -0.49
ATPAF2-208	ENST00000496852	MBNL2	Q5VZF2	373 aa	Known RBP	11.98	□□□□□ -0.49
ATPAF2-208	ENST00000496852	DOK3	Q7L591	496 aa		11.98	□□□□□ -0.49
ATPAF2-208	ENST00000496852	OR51A4	Q8NGJ6	313 aa		11.98	□□□□□ -0.49
ATPAF2-208	ENST00000496852	KLF14	Q8TD94	323 aa	Predicted RBP	11.98	□□□□□ -0.49
ATPAF2-208	ENST00000496852	NEUROG1	Q92886	237 aa		11.98	□□□□□ -0.49
ATPAF2-208	ENST00000496852	POU2F3	Q9UKI9	436 aa		11.98	□□□□□ -0.49
ATPAF2-208	ENST00000496852	HHLA2	Q9UM44	414 aa		11.98	□□□□□ -0.49
ATPAF2-208	ENST00000496852	FASN	P49327	2511 aa	Known RBP	11.98	□□□□□ -0.49
ATPAF2-208	ENST00000496852		A0A1B0GVI7	797 aa		11.97	□□□□□ -0.49
ATPAF2-208	ENST00000496852		A0A1W2PPR1	153 aa		11.97	□□□□□ -0.49
ATPAF2-208	ENST00000496852	LOC390937	A0A1W2PQ73	354 aa		11.97	□□□□□ -0.49
ATPAF2-208	ENST00000496852	SYT7	O43581	403 aa		11.97	□□□□□ -0.49
ATPAF2-208	ENST00000496852	OCM2	P0CE71	109 aa		11.97	□□□□□ -0.49
ATPAF2-208	ENST00000496852	COX6B1	P14854	86 aa		11.97	□□□□□ -0.49
ATPAF2-208	ENST00000496852	RAC2	P15153	192 aa		11.97	□□□□□ -0.49
ATPAF2-208	ENST00000496852	ZNF250	P15622	560 aa		11.97	□□□□□ -0.49
ATPAF2-208	ENST00000496852	SERPINB10	P48595	397 aa		11.97	□□□□□ -0.49
ATPAF2-208	ENST00000496852	OR8B8	Q15620	311 aa		11.97	□□□□□ -0.49
ATPAF2-208	ENST00000496852	CTF1	Q16619	201 aa		11.97	□□□□□ -0.49
ATPAF2-208	ENST00000496852	ZNF718	Q3SXZ3	478 aa		11.97	□□□□□ -0.49
ATPAF2-208	ENST00000496852	ZNF672	Q499Z4	452 aa	Predicted RBP	11.97	□□□□□ -0.49
ATPAF2-208	ENST00000496852	VHLL	Q6RSH7	139 aa		11.97	□□□□□ -0.49
ATPAF2-208	ENST00000496852	PGAP1	Q75T13	922 aa		11.97	□□□□□ -0.49
ATPAF2-208	ENST00000496852	MRPL21	Q7Z2W9	205 aa	Known RBP	11.97	□□□□□ -0.49
ATPAF2-208	ENST00000496852	OR14K1	Q8NGZ2	314 aa		11.97	□□□□□ -0.49
ATPAF2-208	ENST00000496852	HAVCR1	Q96D42	359 aa		11.97	□□□□□ -0.49
ATPAF2-208	ENST00000496852	TRMT61A	Q96FX7	289 aa	Known RBP	11.97	□□□□□ -0.49
ATPAF2-208	ENST00000496852	FAM71F1	Q96KD3	344 aa	Predicted RBP	11.97	□□□□□ -0.49
ATPAF2-208	ENST00000496852	OR14A2	Q96R54	314 aa		11.97	□□□□□ -0.49
ATPAF2-208	ENST00000496852	TXNL4B	Q9NX01	149 aa	Known RBP	11.97	□□□□□ -0.49
ATPAF2-208	ENST00000496852	DHDH	Q9UQ10	334 aa		11.97	□□□□□ -0.49
ATPAF2-208	ENST00000496852		V9GYS6	101 aa		11.97	□□□□□ -0.49
ATPAF2-208	ENST00000496852	TRBV5-5	A0A0J9YX44	114 aa		11.97	□□□□□ -0.49
ATPAF2-208	ENST00000496852	TRDV1	A0A1B0GX56	115 aa		11.97	□□□□□ -0.49
ATPAF2-208	ENST00000496852	SC5D	O75845	299 aa		11.97	□□□□□ -0.49
ATPAF2-208	ENST00000496852	DHRS3	O75911	302 aa		11.97	□□□□□ -0.49
ATPAF2-208	ENST00000496852	COL8A1	P27658	744 aa		11.97	□□□□□ -0.49
ATPAF2-208	ENST00000496852	GSK3A	P49840	483 aa		11.97	□□□□□ -0.49
ATPAF2-208	ENST00000496852	FABP6	P51161	128 aa		11.97	□□□□□ -0.49
ATPAF2-208	ENST00000496852	PSG7	Q13046	419 aa		11.97	□□□□□ -0.49
ATPAF2-208	ENST00000496852	GDPGP1	Q6ZNW5	385 aa		11.97	□□□□□ -0.49
ATPAF2-208	ENST00000496852	CCDC54	Q8NEL0	328 aa		11.97	□□□□□ -0.49
ATPAF2-208	ENST00000496852	OR13C3	Q8NGS6	347 aa		11.97	□□□□□ -0.49
ATPAF2-208	ENST00000496852	GPR148	Q8TDV2	347 aa		11.97	□□□□□ -0.49
ATPAF2-208	ENST00000496852	ITFG2	Q969R8	447 aa		11.97	□□□□□ -0.49
ATPAF2-208	ENST00000496852	CMBL	Q96DG6	245 aa		11.97	□□□□□ -0.49
ATPAF2-208	ENST00000496852	DCUN1D5	Q9BTE7	237 aa		11.97	□□□□□ -0.49
ATPAF2-208	ENST00000496852	PLEKHB1	Q9UF11	243 aa	Predicted RBP	11.97	□□□□□ -0.49
ATPAF2-208	ENST00000496852	IGLV3-9	A0A075B6K5	115 aa		11.96	□□□□□ -0.5
ATPAF2-208	ENST00000496852	LMX1B	O60663	402 aa		11.96	□□□□□ -0.5
ATPAF2-208	ENST00000496852	MTRF1	O75570	445 aa	Known RBP	11.96	□□□□□ -0.5
ATPAF2-208	ENST00000496852	ZNF12	P17014	697 aa		11.96	□□□□□ -0.5
ATPAF2-208	ENST00000496852	KITLG	P21583	273 aa		11.96	□□□□□ -0.5
ATPAF2-208	ENST00000496852	ACKR3	P25106	362 aa		11.96	□□□□□ -0.5
ATPAF2-208	ENST00000496852	CALR	P27797	417 aa	Known RBP	11.96	□□□□□ -0.5
ATPAF2-208	ENST00000496852	GCH1	P30793	250 aa		11.96	□□□□□ -0.5
ATPAF2-208	ENST00000496852	SPCS2	Q15005	226 aa		11.96	□□□□□ -0.5
ATPAF2-208	ENST00000496852	ADIPOQ	Q15848	244 aa		11.96	□□□□□ -0.5
ATPAF2-208	ENST00000496852	CNPY1	Q3B7I2	92 aa		11.96	□□□□□ -0.5
ATPAF2-208	ENST00000496852	CD200R1L	Q6Q8B3	271 aa		11.96	□□□□□ -0.5
ATPAF2-208	ENST00000496852	TMEM91	Q6ZNR0	172 aa		11.96	□□□□□ -0.5
ATPAF2-208	ENST00000496852	LRP11	Q86VZ4	500 aa		11.96	□□□□□ -0.5
ATPAF2-208	ENST00000496852	NDNF	Q8TB73	568 aa		11.96	□□□□□ -0.5
ATPAF2-208	ENST00000496852	SYNPR	Q8TBG9	265 aa		11.96	□□□□□ -0.5
ATPAF2-208	ENST00000496852	MRPL24	Q96A35	216 aa	Known RBP	11.96	□□□□□ -0.5
ATPAF2-208	ENST00000496852	KCTD7	Q96MP8	289 aa		11.96	□□□□□ -0.5
ATPAF2-208	ENST00000496852	MRPL37	Q9BZE1	423 aa	Known RBP	11.96	□□□□□ -0.5
ATPAF2-208	ENST00000496852	CISD1	Q9NZ45	108 aa	Known RBP	11.96	□□□□□ -0.5
ATPAF2-208	ENST00000496852	FZR1	Q9UM11	496 aa		11.96	□□□□□ -0.5
ATPAF2-208	ENST00000496852	CMAHP	Q9Y471	501 aa		11.96	□□□□□ -0.5
ATPAF2-208	ENST00000496852	DHRS7C	A6NNS2	312 aa		11.95	□□□□□ -0.5
ATPAF2-208	ENST00000496852	CD300LB	A8K4G0	201 aa		11.95	□□□□□ -0.5
ATPAF2-208	ENST00000496852	IQCF6	A8MYZ5	107 aa		11.95	□□□□□ -0.5
ATPAF2-208	ENST00000496852	ZNF879	B4DU55	563 aa		11.95	□□□□□ -0.5
ATPAF2-208	ENST00000496852	SLC22A1	O15245	554 aa		11.95	□□□□□ -0.5
ATPAF2-208	ENST00000496852	CTAG2	O75638	210 aa		11.95	□□□□□ -0.5
ATPAF2-208	ENST00000496852	IGHV3-13	P01766	116 aa		11.95	□□□□□ -0.5
ATPAF2-208	ENST00000496852	MYL9	P24844	172 aa		11.95	□□□□□ -0.5
ATPAF2-208	ENST00000496852	MAP2K3	P46734	347 aa		11.95	□□□□□ -0.5
ATPAF2-208	ENST00000496852	MXD1	Q05195	221 aa		11.95	□□□□□ -0.5
ATPAF2-208	ENST00000496852	ALKBH6	Q3KRA9	238 aa		11.95	□□□□□ -0.5
ATPAF2-208	ENST00000496852		Q499Y3	187 aa		11.95	□□□□□ -0.5
ATPAF2-208	ENST00000496852	ZMAT1	Q5H9K5	638 aa		11.95	□□□□□ -0.5
ATPAF2-208	ENST00000496852	FAM27D1	Q5T7N8	215 aa		11.95	□□□□□ -0.5
ATPAF2-208	ENST00000496852	OR2T2	Q6IF00	324 aa		11.95	□□□□□ -0.5
ATPAF2-208	ENST00000496852	PAMR1	Q6UXH9	720 aa		11.95	□□□□□ -0.5
ATPAF2-208	ENST00000496852	OR56B2P	Q8NGI1	322 aa		11.95	□□□□□ -0.5
ATPAF2-208	ENST00000496852	BCL7B	Q9BQE9	202 aa		11.95	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms