RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 OPA3Q9H6K4 179 aa10.92□□□□□ -0.66
COL1A1-209ENST00000495677 DUX4Q9UBX2 424 aa10.92□□□□□ -0.66
COL1A1-209ENST00000495677 IER3IP1Q9Y5U9 82 aa10.92□□□□□ -0.66
COL1A1-209ENST00000495677 J3KTA2 159 aa10.91□□□□□ -0.66
COL1A1-209ENST00000495677 M0R135 149 aa10.91□□□□□ -0.66
COL1A1-209ENST00000495677 SOCS2O14508 198 aa10.91□□□□□ -0.66
COL1A1-209ENST00000495677 ACOT8O14734 319 aa10.91□□□□□ -0.66
COL1A1-209ENST00000495677 TIPRLO75663 272 aa10.91□□□□□ -0.66
COL1A1-209ENST00000495677 IGLL1P15814 213 aa10.91□□□□□ -0.66
COL1A1-209ENST00000495677 RPS6KA3P51812 740 aa10.91□□□□□ -0.66
COL1A1-209ENST00000495677 CAV3P56539 151 aa10.91□□□□□ -0.66
COL1A1-209ENST00000495677 PRB3Q04118 309 aaPredicted RBP10.91□□□□□ -0.66
COL1A1-209ENST00000495677 LY6EQ16553 131 aa10.91□□□□□ -0.66
COL1A1-209ENST00000495677 RFX4Q33E94 735 aa10.91□□□□□ -0.66
COL1A1-209ENST00000495677 SNAI3Q3KNW1 292 aa10.91□□□□□ -0.66
COL1A1-209ENST00000495677 RABL3Q5HYI8 236 aa10.91□□□□□ -0.66
COL1A1-209ENST00000495677 DEFB121Q5J5C9 76 aa10.91□□□□□ -0.66
COL1A1-209ENST00000495677 WDR82Q6UXN9 313 aa10.91□□□□□ -0.66
COL1A1-209ENST00000495677 ZBTB46Q86UZ6 589 aa10.91□□□□□ -0.66
COL1A1-209ENST00000495677 OR5D13Q8NGL4 314 aa10.91□□□□□ -0.66
COL1A1-209ENST00000495677 OR2AJ1Q8NGZ0 328 aa10.91□□□□□ -0.66
COL1A1-209ENST00000495677 LRRC29Q8WV35 223 aa10.91□□□□□ -0.66
COL1A1-209ENST00000495677 C17orf50Q8WW18 174 aa10.91□□□□□ -0.66
COL1A1-209ENST00000495677 LZICQ8WZA0 190 aa10.91□□□□□ -0.66
COL1A1-209ENST00000495677 ZNF799Q96GE5 643 aa10.91□□□□□ -0.66
COL1A1-209ENST00000495677 TPD52L3Q96J77 140 aa10.91□□□□□ -0.66
COL1A1-209ENST00000495677 CITED2Q99967 270 aaPredicted RBP10.91□□□□□ -0.66
COL1A1-209ENST00000495677 B9D2Q9BPU9 175 aa10.91□□□□□ -0.66
COL1A1-209ENST00000495677 PARD6BQ9BYG5 372 aa10.91□□□□□ -0.66
COL1A1-209ENST00000495677 ZNF702PQ9H963 129 aa10.91□□□□□ -0.66
COL1A1-209ENST00000495677 RHCGQ9UBD6 479 aa10.91□□□□□ -0.66
COL1A1-209ENST00000495677 SNX13Q9Y5W8 968 aa10.91□□□□□ -0.66
COL1A1-209ENST00000495677 DUS4LO95620 317 aaKnown RBP10.9□□□□□ -0.66
COL1A1-209ENST00000495677 IFNW1P05000 195 aa10.9□□□□□ -0.66
COL1A1-209ENST00000495677 NAA10P41227 235 aaPredicted RBP10.9□□□□□ -0.66
COL1A1-209ENST00000495677 YAP1P46937 504 aaKnown RBP10.9□□□□□ -0.66
COL1A1-209ENST00000495677 FXYD6P3P58550 94 aa10.9□□□□□ -0.66
COL1A1-209ENST00000495677 ELF3P78545 371 aaPredicted RBP10.9□□□□□ -0.66
COL1A1-209ENST00000495677 COL10A1Q03692 680 aa10.9□□□□□ -0.66
COL1A1-209ENST00000495677 BLMHQ13867 455 aa10.9□□□□□ -0.66
COL1A1-209ENST00000495677 STUMQ69YW2 141 aa10.9□□□□□ -0.66
COL1A1-209ENST00000495677 DRAM2Q6UX65 266 aa10.9□□□□□ -0.66
COL1A1-209ENST00000495677 CCBE1Q6UXH8 406 aaPredicted RBP10.9□□□□□ -0.66
COL1A1-209ENST00000495677 ZNF788Q6ZQV5 615 aa10.9□□□□□ -0.66
COL1A1-209ENST00000495677 LINC00346Q8IVM7 164 aa10.9□□□□□ -0.66
COL1A1-209ENST00000495677 FAM216BQ8N7L0 139 aa10.9□□□□□ -0.66
COL1A1-209ENST00000495677 OR1M1Q8NGA1 313 aa10.9□□□□□ -0.66
COL1A1-209ENST00000495677 OR9Q1Q8NGQ5 310 aa10.9□□□□□ -0.66
COL1A1-209ENST00000495677 SPTSSAQ969W0 71 aa10.9□□□□□ -0.66
COL1A1-209ENST00000495677 SPSB4Q96A44 273 aa10.9□□□□□ -0.66
COL1A1-209ENST00000495677 MED30Q96HR3 178 aa10.9□□□□□ -0.66
COL1A1-209ENST00000495677 TLNRD1Q9H1K6 362 aa10.9□□□□□ -0.66
COL1A1-209ENST00000495677 SRA1Q9HD15 236 aaKnown RBP10.9□□□□□ -0.66
COL1A1-209ENST00000495677 DNAJB11Q9UBS4 358 aa10.9□□□□□ -0.66
COL1A1-209ENST00000495677 KCNG2Q9UJ96 466 aa10.9□□□□□ -0.66
COL1A1-209ENST00000495677 RAB21Q9UL25 225 aa10.9□□□□□ -0.66
COL1A1-209ENST00000495677 WI2-2373I1.2A0A1W2PRP0 233 aa10.89□□□□□ -0.67
COL1A1-209ENST00000495677 VGLL3A8MV65 326 aa10.89□□□□□ -0.67
COL1A1-209ENST00000495677 FXYD1O00168 92 aa10.89□□□□□ -0.67
COL1A1-209ENST00000495677 ARPC3O15145 178 aa10.89□□□□□ -0.67
COL1A1-209ENST00000495677 CHST1O43916 411 aa10.89□□□□□ -0.67
COL1A1-209ENST00000495677 CENPAP49450 140 aa10.89□□□□□ -0.67
COL1A1-209ENST00000495677 CD83Q01151 205 aa10.89□□□□□ -0.67
COL1A1-209ENST00000495677 EGFEM1PQ0D2K5 195 aa10.89□□□□□ -0.67
COL1A1-209ENST00000495677 LRRC23Q53EV4 343 aaPredicted RBP10.89□□□□□ -0.67
COL1A1-209ENST00000495677 COQ5Q5HYK3 327 aa10.89□□□□□ -0.67
COL1A1-209ENST00000495677 GLYATL3Q5SZD4 288 aa10.89□□□□□ -0.67
COL1A1-209ENST00000495677 DPY19L4Q7Z388 723 aa10.89□□□□□ -0.67
COL1A1-209ENST00000495677 WDR86Q86TI4 376 aa10.89□□□□□ -0.67
COL1A1-209ENST00000495677 CYB561A3Q8NBI2 242 aa10.89□□□□□ -0.67
COL1A1-209ENST00000495677 OR56B2PQ8NGI1 322 aa10.89□□□□□ -0.67
COL1A1-209ENST00000495677 OR2AE1Q8NHA4 323 aa10.89□□□□□ -0.67
COL1A1-209ENST00000495677 RORBQ92753 470 aa10.89□□□□□ -0.67
COL1A1-209ENST00000495677 ZBTB9Q96C00 473 aa10.89□□□□□ -0.67
COL1A1-209ENST00000495677 RCC1LQ96I51 464 aaKnown RBP10.89□□□□□ -0.67
COL1A1-209ENST00000495677 MAP6Q96JE9 813 aa10.89□□□□□ -0.67
COL1A1-209ENST00000495677 HAO2Q9NYQ3 351 aa10.89□□□□□ -0.67
COL1A1-209ENST00000495677 ADA2Q9NZK5 511 aa10.89□□□□□ -0.67
COL1A1-209ENST00000495677 CAPN7Q9Y6W3 813 aa10.89□□□□□ -0.67
COL1A1-209ENST00000495677 FAM220BPB1ANY3 271 aa10.88□□□□□ -0.67
COL1A1-209ENST00000495677 NOS3P29474 1203 aa10.88□□□□□ -0.67
COL1A1-209ENST00000495677 OMPP47874 163 aa10.88□□□□□ -0.67
COL1A1-209ENST00000495677 GSK3BP49841 420 aa10.88□□□□□ -0.67
COL1A1-209ENST00000495677 CD69Q07108 199 aa10.88□□□□□ -0.67
COL1A1-209ENST00000495677 IKZF1Q13422 519 aa10.88□□□□□ -0.67
COL1A1-209ENST00000495677 METTL21CQ5VZV1 264 aa10.88□□□□□ -0.67
COL1A1-209ENST00000495677 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.88□□□□□ -0.67
COL1A1-209ENST00000495677 OR10Z1Q8NGY1 313 aa10.88□□□□□ -0.67
COL1A1-209ENST00000495677 OR8S1Q8NH09 359 aa10.88□□□□□ -0.67
COL1A1-209ENST00000495677 H1FXQ92522 213 aaKnown RBP10.88□□□□□ -0.67
COL1A1-209ENST00000495677 SEH1LQ96EE3 360 aa10.88□□□□□ -0.67
COL1A1-209ENST00000495677 DUS3LQ96G46 650 aaKnown RBP10.88□□□□□ -0.67
COL1A1-209ENST00000495677 FAM46AQ96IP4 442 aaKnown RBP10.88□□□□□ -0.67
COL1A1-209ENST00000495677 DDOQ99489 341 aa10.88□□□□□ -0.67
COL1A1-209ENST00000495677 SLC25A10Q9UBX3 287 aaPredicted RBP10.88□□□□□ -0.67
COL1A1-209ENST00000495677 FAM90A8PA6NJQ4 464 aa10.87□□□□□ -0.67
COL1A1-209ENST00000495677 ANKRD30BLA7E2S9 258 aa10.87□□□□□ -0.67
COL1A1-209ENST00000495677 SIGLEC5O15389 551 aa10.87□□□□□ -0.67
COL1A1-209ENST00000495677 XRCC2O43543 280 aa10.87□□□□□ -0.67
COL1A1-209ENST00000495677 RENP00797 406 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms