RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 OFCC1Q8IZS5 231 aa5.47□□□□□ -1.53
VIM-207ENST00000495528 CSNK2A3Q8NEV1 391 aa5.47□□□□□ -1.53
VIM-207ENST00000495528 OR4K5Q8NGD3 323 aa5.47□□□□□ -1.53
VIM-207ENST00000495528 PFN4Q8NHR9 129 aa5.47□□□□□ -1.53
VIM-207ENST00000495528 GNPDA2Q8TDQ7 276 aa5.47□□□□□ -1.53
VIM-207ENST00000495528 ACOT11Q8WXI4 607 aaPredicted RBP5.47□□□□□ -1.53
VIM-207ENST00000495528 TAAR8Q969N4 342 aa5.47□□□□□ -1.53
VIM-207ENST00000495528 SLC25A36Q96CQ1 311 aa5.47□□□□□ -1.53
VIM-207ENST00000495528 NRBF2Q96F24 287 aa5.47□□□□□ -1.53
VIM-207ENST00000495528 ARL5BQ96KC2 179 aa5.47□□□□□ -1.53
VIM-207ENST00000495528 FEVQ99581 238 aa5.47□□□□□ -1.53
VIM-207ENST00000495528 EPYCQ99645 322 aa5.47□□□□□ -1.53
VIM-207ENST00000495528 PLA2G12AQ9BZM1 189 aa5.47□□□□□ -1.53
VIM-207ENST00000495528 OR11A1Q9GZK7 315 aa5.47□□□□□ -1.53
VIM-207ENST00000495528 FKRPQ9H9S5 495 aa5.47□□□□□ -1.53
VIM-207ENST00000495528 SLC17A5Q9NRA2 495 aa5.47□□□□□ -1.53
VIM-207ENST00000495528 EMC3Q9P0I2 261 aa5.47□□□□□ -1.53
VIM-207ENST00000495528 MOKQ9UQ07 419 aa5.47□□□□□ -1.53
VIM-207ENST00000495528 MED31Q9Y3C7 131 aa5.47□□□□□ -1.53
VIM-207ENST00000495528 IGKV1D-42A0A075B6H8 117 aa5.46□□□□□ -1.54
VIM-207ENST00000495528 LOC390937A0A1W2PQ73 354 aa5.46□□□□□ -1.54
VIM-207ENST00000495528 LRRN3E7EW58 273 aa5.46□□□□□ -1.54
VIM-207ENST00000495528 GPR171O14626 319 aa5.46□□□□□ -1.54
VIM-207ENST00000495528 TCF21O43680 179 aa5.46□□□□□ -1.54
VIM-207ENST00000495528 HIST1H2ABP04908 130 aa5.46□□□□□ -1.54
VIM-207ENST00000495528 ANXA8P13928 327 aa5.46□□□□□ -1.54
VIM-207ENST00000495528 FUT1P19526 365 aa5.46□□□□□ -1.54
VIM-207ENST00000495528 HNF1AP20823 631 aa5.46□□□□□ -1.54
VIM-207ENST00000495528 IFNGR2P38484 337 aa5.46□□□□□ -1.54
VIM-207ENST00000495528 RBM34P42696 430 aaKnown RBP5.46□□□□□ -1.54
VIM-207ENST00000495528 GPR4P46093 362 aa5.46□□□□□ -1.54
VIM-207ENST00000495528 DAPP51397 102 aa5.46□□□□□ -1.54
VIM-207ENST00000495528 OR2B6P58173 313 aa5.46□□□□□ -1.54
VIM-207ENST00000495528 H3F3AP84243 136 aa5.46□□□□□ -1.54
VIM-207ENST00000495528 SNCBQ16143 134 aa5.46□□□□□ -1.54
VIM-207ENST00000495528 TSPO2Q5TGU0 170 aa5.46□□□□□ -1.54
VIM-207ENST00000495528 C1orf140Q5VVS0 124 aa5.46□□□□□ -1.54
VIM-207ENST00000495528 SPSB3Q6PJ21 355 aa5.46□□□□□ -1.54
VIM-207ENST00000495528 HIST3H2AQ7L7L0 130 aa5.46□□□□□ -1.54
VIM-207ENST00000495528 ZER1Q7Z7L7 766 aa5.46□□□□□ -1.54
VIM-207ENST00000495528 SVOPLQ8N434 492 aa5.46□□□□□ -1.54
VIM-207ENST00000495528 CBR4Q8N4T8 237 aa5.46□□□□□ -1.54
VIM-207ENST00000495528 LINC00471Q8N535 108 aa5.46□□□□□ -1.54
VIM-207ENST00000495528 RFLNBQ8N5W9 214 aa5.46□□□□□ -1.54
VIM-207ENST00000495528 LRRC17Q8N6Y2 441 aa5.46□□□□□ -1.54
VIM-207ENST00000495528 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.46□□□□□ -1.54
VIM-207ENST00000495528 OR10G2Q8NGC3 310 aa5.46□□□□□ -1.54
VIM-207ENST00000495528 OR9Q2Q8NGE9 314 aa5.46□□□□□ -1.54
VIM-207ENST00000495528 PIGXQ8TBF5 258 aa5.46□□□□□ -1.54
VIM-207ENST00000495528 MAGEE2Q8TD90 523 aaPredicted RBP5.46□□□□□ -1.54
VIM-207ENST00000495528 HIST1H2ACQ93077 130 aa5.46□□□□□ -1.54
VIM-207ENST00000495528 DDIT4LQ96D03 193 aa5.46□□□□□ -1.54
VIM-207ENST00000495528 BPIFA2Q96DR5 249 aa5.46□□□□□ -1.54
VIM-207ENST00000495528 SGTBQ96EQ0 304 aa5.46□□□□□ -1.54
VIM-207ENST00000495528 GPA33Q99795 319 aa5.46□□□□□ -1.54
VIM-207ENST00000495528 CHCHD6Q9BRQ6 235 aa5.46□□□□□ -1.54
VIM-207ENST00000495528 TMEM43Q9BTV4 400 aa5.46□□□□□ -1.54
VIM-207ENST00000495528 C9orf16Q9BUW7 83 aa5.46□□□□□ -1.54
VIM-207ENST00000495528 OSBPL10Q9BXB5 764 aa5.46□□□□□ -1.54
VIM-207ENST00000495528 BPESC1Q9GZL8 116 aa5.46□□□□□ -1.54
VIM-207ENST00000495528 ANKRD19PQ9H560 264 aa5.46□□□□□ -1.54
VIM-207ENST00000495528 ZNF556Q9HAH1 456 aa5.46□□□□□ -1.54
VIM-207ENST00000495528 C12orf10Q9HB07 376 aa5.46□□□□□ -1.54
VIM-207ENST00000495528 MEPEQ9NQ76 525 aaPredicted RBP5.46□□□□□ -1.54
VIM-207ENST00000495528 SLC7A10Q9NS82 523 aa5.46□□□□□ -1.54
VIM-207ENST00000495528 CHRNA9Q9UGM1 479 aa5.46□□□□□ -1.54
VIM-207ENST00000495528 AMDHD2Q9Y303 409 aa5.46□□□□□ -1.54
VIM-207ENST00000495528 FKBP7Q9Y680 259 aa5.46□□□□□ -1.54
VIM-207ENST00000495528 TRAV36DV7A0A075B6V5 113 aa5.45□□□□□ -1.54
VIM-207ENST00000495528 IGHV1-18A0A0C4DH31 117 aa5.45□□□□□ -1.54
VIM-207ENST00000495528 EFCAB9A8MZ26 197 aa5.45□□□□□ -1.54
VIM-207ENST00000495528 BLOC1S5-TXNDC5H3BN57 136 aa5.45□□□□□ -1.54
VIM-207ENST00000495528 CASQ2O14958 399 aaPredicted RBP5.45□□□□□ -1.54
VIM-207ENST00000495528 ZNF208O43345 1280 aa5.45□□□□□ -1.54
VIM-207ENST00000495528 SPRY1O43609 319 aaPredicted RBP5.45□□□□□ -1.54
VIM-207ENST00000495528 MITFO75030 526 aaPredicted RBP5.45□□□□□ -1.54
VIM-207ENST00000495528 PTP4A3O75365 173 aa5.45□□□□□ -1.54
VIM-207ENST00000495528 OR7A10O76100 309 aa5.45□□□□□ -1.54
VIM-207ENST00000495528 AHSA1O95433 338 aa5.45□□□□□ -1.54
VIM-207ENST00000495528 SCGB1D1O95968 90 aa5.45□□□□□ -1.54
VIM-207ENST00000495528 IGFBP1P08833 259 aaPredicted RBP5.45□□□□□ -1.54
VIM-207ENST00000495528 SAGP10523 405 aaPredicted RBP5.45□□□□□ -1.54
VIM-207ENST00000495528 ZNF26P17031 533 aaPredicted RBP5.45□□□□□ -1.54
VIM-207ENST00000495528 CDH2P19022 906 aaPredicted RBP5.45□□□□□ -1.54
VIM-207ENST00000495528 FKBP2P26885 142 aaKnown RBP5.45□□□□□ -1.54
VIM-207ENST00000495528 IL2RGP31785 369 aa5.45□□□□□ -1.54
VIM-207ENST00000495528 OMPP47874 163 aa5.45□□□□□ -1.54
VIM-207ENST00000495528 CLK1P49759 484 aaKnown RBP5.45□□□□□ -1.54
VIM-207ENST00000495528 PRPS1P60891 318 aa5.45□□□□□ -1.54
VIM-207ENST00000495528 SNRPD2P62316 118 aaKnown RBP5.45□□□□□ -1.54
VIM-207ENST00000495528 ARF1P84077 181 aaKnown RBP5.45□□□□□ -1.54
VIM-207ENST00000495528 GK3PQ14409 553 aa5.45□□□□□ -1.54
VIM-207ENST00000495528 OR7A5Q15622 319 aa5.45□□□□□ -1.54
VIM-207ENST00000495528 HIKESHIQ53FT3 197 aa5.45□□□□□ -1.54
VIM-207ENST00000495528 OGFRL1Q5TC84 451 aaPredicted RBP5.45□□□□□ -1.54
VIM-207ENST00000495528 ZNF770Q6IQ21 691 aaPredicted RBP5.45□□□□□ -1.54
VIM-207ENST00000495528 C1orf94Q6P1W5 598 aa5.45□□□□□ -1.54
VIM-207ENST00000495528 CASP12Q6UXS9 341 aa5.45□□□□□ -1.54
VIM-207ENST00000495528 C12orf54Q6X4T0 127 aa5.45□□□□□ -1.54
VIM-207ENST00000495528 TMPRSS11FQ6ZWK6 438 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms