RNA–Protein interactions for RNA: ENST00000495460.1

NUP58-214, Transcript of nucleoporin 58, humanhuman

TSL 5

Gene NUP58, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-214ENST00000495460 CCDC22O60826 627 aa12.35□□□□□ -0.43
NUP58-214ENST00000495460 FCN3O75636 299 aa12.35□□□□□ -0.43
NUP58-214ENST00000495460 GSSP48637 474 aa12.35□□□□□ -0.43
NUP58-214ENST00000495460 TGM4P49221 684 aa12.35□□□□□ -0.43
NUP58-214ENST00000495460 ACSM1Q08AH1 577 aa12.35□□□□□ -0.43
NUP58-214ENST00000495460 CGB2Q6NT52 195 aa12.35□□□□□ -0.43
NUP58-214ENST00000495460 LINC00346Q8IVM7 164 aa12.35□□□□□ -0.43
NUP58-214ENST00000495460 C11orf53Q8IXP5 236 aa12.35□□□□□ -0.43
NUP58-214ENST00000495460 SCCPDHQ8NBX0 429 aa12.35□□□□□ -0.43
NUP58-214ENST00000495460 OR4K13Q8NH42 304 aa12.35□□□□□ -0.43
NUP58-214ENST00000495460 FANK1Q8TC84 345 aa12.35□□□□□ -0.43
NUP58-214ENST00000495460 KCTD14Q9BQ13 255 aaPredicted RBP12.35□□□□□ -0.43
NUP58-214ENST00000495460 IFT27Q9BW83 186 aa12.35□□□□□ -0.43
NUP58-214ENST00000495460 TLNRD1Q9H1K6 362 aa12.35□□□□□ -0.43
NUP58-214ENST00000495460 TNFRSF19Q9NS68 423 aa12.35□□□□□ -0.43
NUP58-214ENST00000495460 FGFR1OP2Q9NVK5 253 aa12.35□□□□□ -0.43
NUP58-214ENST00000495460 OR10H3O60404 316 aa12.34□□□□□ -0.43
NUP58-214ENST00000495460 APOC1P02654 83 aa12.34□□□□□ -0.43
NUP58-214ENST00000495460 GYPAP02724 150 aa12.34□□□□□ -0.43
NUP58-214ENST00000495460 CFL1P23528 166 aaKnown RBP12.34□□□□□ -0.43
NUP58-214ENST00000495460 EEF1B2P24534 225 aaKnown RBP12.34□□□□□ -0.43
NUP58-214ENST00000495460 NAA10P41227 235 aaPredicted RBP12.34□□□□□ -0.43
NUP58-214ENST00000495460 UBE2E1P51965 193 aa12.34□□□□□ -0.43
NUP58-214ENST00000495460 HMGA2P52926 109 aa12.34□□□□□ -0.43
NUP58-214ENST00000495460 BLVRAP53004 296 aa12.34□□□□□ -0.43
NUP58-214ENST00000495460 TSPAN31Q12999 210 aa12.34□□□□□ -0.43
NUP58-214ENST00000495460 AANATQ16613 207 aa12.34□□□□□ -0.43
NUP58-214ENST00000495460 SNAI3Q3KNW1 292 aa12.34□□□□□ -0.43
NUP58-214ENST00000495460 GLYATQ6IB77 296 aa12.34□□□□□ -0.43
NUP58-214ENST00000495460 REC114Q7Z4M0 266 aa12.34□□□□□ -0.43
NUP58-214ENST00000495460 VMO1Q7Z5L0 202 aa12.34□□□□□ -0.43
NUP58-214ENST00000495460 LINC00471Q8N535 108 aa12.34□□□□□ -0.43
NUP58-214ENST00000495460 C19orf18Q8NEA5 215 aa12.34□□□□□ -0.43
NUP58-214ENST00000495460 OR2T4Q8NH00 348 aa12.34□□□□□ -0.43
NUP58-214ENST00000495460 KCNJ15Q99712 375 aa12.34□□□□□ -0.43
NUP58-214ENST00000495460 IL20Q9NYY1 176 aa12.34□□□□□ -0.43
NUP58-214ENST00000495460 GMNNO75496 209 aa12.33□□□□□ -0.44
NUP58-214ENST00000495460 GADD45GO95257 159 aa12.33□□□□□ -0.44
NUP58-214ENST00000495460 HLA-DQA2P01906 255 aa12.33□□□□□ -0.44
NUP58-214ENST00000495460 SEMG1P04279 462 aa12.33□□□□□ -0.44
NUP58-214ENST00000495460 SLC15A1P46059 708 aa12.33□□□□□ -0.44
NUP58-214ENST00000495460 FAM76BQ5HYJ3 339 aa12.33□□□□□ -0.44
NUP58-214ENST00000495460 GLYATL3Q5SZD4 288 aa12.33□□□□□ -0.44
NUP58-214ENST00000495460 DHRS7BQ6IAN0 325 aaPredicted RBP12.33□□□□□ -0.44
NUP58-214ENST00000495460 OR52H1Q8NGJ2 320 aa12.33□□□□□ -0.44
NUP58-214ENST00000495460 OR10Z1Q8NGY1 313 aa12.33□□□□□ -0.44
NUP58-214ENST00000495460 PYURFQ96I23 114 aa12.33□□□□□ -0.44
NUP58-214ENST00000495460 NSRP1Q9H0G5 558 aaKnown RBP12.33□□□□□ -0.44
NUP58-214ENST00000495460 RASSF4Q9H2L5 321 aa12.33□□□□□ -0.44
NUP58-214ENST00000495460 TOR3AQ9H497 397 aa12.33□□□□□ -0.44
NUP58-214ENST00000495460 ABCB9Q9NP78 766 aa12.33□□□□□ -0.44
NUP58-214ENST00000495460 ZNF816-ZNF321PA0A0X1KG74 233 aa12.32□□□□□ -0.44
NUP58-214ENST00000495460 ANKRD30BLA7E2S9 258 aa12.32□□□□□ -0.44
NUP58-214ENST00000495460 M0R1W7 72 aa12.32□□□□□ -0.44
NUP58-214ENST00000495460 KRT36O76013 467 aa12.32□□□□□ -0.44
NUP58-214ENST00000495460 OPN1MWP04001 364 aa12.32□□□□□ -0.44
NUP58-214ENST00000495460 GRPP07492 148 aa12.32□□□□□ -0.44
NUP58-214ENST00000495460 CSF1P09603 554 aa12.32□□□□□ -0.44
NUP58-214ENST00000495460 OPN1MW2P0DN77 364 aa12.32□□□□□ -0.44
NUP58-214ENST00000495460 OPN1MW3P0DN78 364 aa12.32□□□□□ -0.44
NUP58-214ENST00000495460 KIR2DS4P43632 304 aa12.32□□□□□ -0.44
NUP58-214ENST00000495460 GRB2P62993 217 aaKnown RBP12.32□□□□□ -0.44
NUP58-214ENST00000495460 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.32□□□□□ -0.44
NUP58-214ENST00000495460 NCR3LG1Q68D85 454 aa12.32□□□□□ -0.44
NUP58-214ENST00000495460 KRT74Q7RTS7 529 aa12.32□□□□□ -0.44
NUP58-214ENST00000495460 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.32□□□□□ -0.44
NUP58-214ENST00000495460 ZDHHC21Q8IVQ6 265 aa12.32□□□□□ -0.44
NUP58-214ENST00000495460 FTMTQ8N4E7 242 aa12.32□□□□□ -0.44
NUP58-214ENST00000495460 CSNK2A3Q8NEV1 391 aa12.32□□□□□ -0.44
NUP58-214ENST00000495460 OR52J3Q8NH60 311 aa12.32□□□□□ -0.44
NUP58-214ENST00000495460 GNPDA2Q8TDQ7 276 aa12.32□□□□□ -0.44
NUP58-214ENST00000495460 CFHR4Q92496 578 aa12.32□□□□□ -0.44
NUP58-214ENST00000495460 TNFRSF14Q92956 283 aa12.32□□□□□ -0.44
NUP58-214ENST00000495460 CMTM5Q96DZ9 223 aa12.32□□□□□ -0.44
NUP58-214ENST00000495460 MED30Q96HR3 178 aa12.32□□□□□ -0.44
NUP58-214ENST00000495460 DCTN5Q9BTE1 182 aa12.32□□□□□ -0.44
NUP58-214ENST00000495460 RGCCQ9H4X1 137 aa12.32□□□□□ -0.44
NUP58-214ENST00000495460 SPAG4Q9NPE6 437 aa12.32□□□□□ -0.44
NUP58-214ENST00000495460 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.31□□□□□ -0.44
NUP58-214ENST00000495460 NPFFO15130 113 aa12.31□□□□□ -0.44
NUP58-214ENST00000495460 NDUFB3O43676 98 aa12.31□□□□□ -0.44
NUP58-214ENST00000495460 TSPAN15O95858 294 aa12.31□□□□□ -0.44
NUP58-214ENST00000495460 CAV3P56539 151 aa12.31□□□□□ -0.44
NUP58-214ENST00000495460 FAM3AP98173 230 aa12.31□□□□□ -0.44
NUP58-214ENST00000495460 LRRC10Q5BKY1 277 aa12.31□□□□□ -0.44
NUP58-214ENST00000495460 WDR82Q6UXN9 313 aa12.31□□□□□ -0.44
NUP58-214ENST00000495460 ZNF826PQ6ZT77 177 aa12.31□□□□□ -0.44
NUP58-214ENST00000495460 DCXRQ7Z4W1 244 aa12.31□□□□□ -0.44
NUP58-214ENST00000495460 Q8N7P7 452 aa12.31□□□□□ -0.44
NUP58-214ENST00000495460 BEND2Q8NDZ0 799 aa12.31□□□□□ -0.44
NUP58-214ENST00000495460 OR1M1Q8NGA1 313 aa12.31□□□□□ -0.44
NUP58-214ENST00000495460 OR56B2PQ8NGI1 322 aa12.31□□□□□ -0.44
NUP58-214ENST00000495460 OR8S1Q8NH09 359 aa12.31□□□□□ -0.44
NUP58-214ENST00000495460 OR2AE1Q8NHA4 323 aa12.31□□□□□ -0.44
NUP58-214ENST00000495460 ST8SIA4Q92187 359 aa12.31□□□□□ -0.44
NUP58-214ENST00000495460 PPP1R14AQ96A00 147 aa12.31□□□□□ -0.44
NUP58-214ENST00000495460 NMNAT2Q9BZQ4 307 aa12.31□□□□□ -0.44
NUP58-214ENST00000495460 FAM234AQ9H0X4 552 aa12.31□□□□□ -0.44
NUP58-214ENST00000495460 MEGF9Q9H1U4 602 aa12.31□□□□□ -0.44
NUP58-214ENST00000495460 METTL8Q9H825 291 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms